RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 MYO7AQ13402 2215 aa3.1□□□□□ -1.91
HMGB1P16-201ENST00000447155 IGLV2-18A0A075B6J9 118 aa3.1□□□□□ -1.91
HMGB1P16-201ENST00000447155 A0A1B0GVY2 172 aa3.1□□□□□ -1.91
HMGB1P16-201ENST00000447155 J3QQQ9 107 aa3.1□□□□□ -1.91
HMGB1P16-201ENST00000447155 LST1O00453 97 aa3.1□□□□□ -1.91
HMGB1P16-201ENST00000447155 IGHV1-69P01742 117 aa3.1□□□□□ -1.91
HMGB1P16-201ENST00000447155 WT1-ASQ06250 92 aa3.1□□□□□ -1.91
HMGB1P16-201ENST00000447155 FAM222AQ5U5X8 452 aa3.1□□□□□ -1.91
HMGB1P16-201ENST00000447155 DUX4L9Q6RFH8 374 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P16-201ENST00000447155 RNF182Q8N6D2 247 aa3.1□□□□□ -1.91
HMGB1P16-201ENST00000447155 SERP2Q8N6R1 65 aa3.1□□□□□ -1.91
HMGB1P16-201ENST00000447155 KLF14Q8TD94 323 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P16-201ENST00000447155 TMEM263Q8WUH6 116 aaKnown RBP3.1□□□□□ -1.91
HMGB1P16-201ENST00000447155 RNF185Q96GF1 192 aa3.1□□□□□ -1.91
HMGB1P16-201ENST00000447155 C16orf74Q96GX8 76 aa3.1□□□□□ -1.91
HMGB1P16-201ENST00000447155 DPH3P1Q9H4G8 78 aa3.1□□□□□ -1.91
HMGB1P16-201ENST00000447155 RPUSD1Q9UJJ7 312 aaKnown RBP3.1□□□□□ -1.91
HMGB1P16-201ENST00000447155 KNTC1P50748 2209 aa3.09□□□□□ -1.91
HMGB1P16-201ENST00000447155 LOC107984640A0A0U1RRK4 108 aa3.09□□□□□ -1.91
HMGB1P16-201ENST00000447155 FAM236DA0A1B0GTK5 79 aa3.09□□□□□ -1.91
HMGB1P16-201ENST00000447155 C10orf142B7Z368 130 aa3.09□□□□□ -1.91
HMGB1P16-201ENST00000447155 H7C2G1 150 aa3.09□□□□□ -1.91
HMGB1P16-201ENST00000447155 LEPROTO15243 131 aa3.09□□□□□ -1.91
HMGB1P16-201ENST00000447155 IGHV3-48P01763 117 aa3.09□□□□□ -1.91
HMGB1P16-201ENST00000447155 IGKV1-16P04430 117 aa3.09□□□□□ -1.91
HMGB1P16-201ENST00000447155 KRTAP1-4P0C5Y4 121 aa3.09□□□□□ -1.91
HMGB1P16-201ENST00000447155 FAM236CP0DP71 79 aa3.09□□□□□ -1.91
HMGB1P16-201ENST00000447155 EFNA4P52798 201 aa3.09□□□□□ -1.91
HMGB1P16-201ENST00000447155 SYNJ2BPP57105 145 aa3.09□□□□□ -1.91
HMGB1P16-201ENST00000447155 KRTAP10-5P60370 271 aa3.09□□□□□ -1.91
HMGB1P16-201ENST00000447155 MRPS36P82909 103 aaKnown RBP3.09□□□□□ -1.91
HMGB1P16-201ENST00000447155 ERCC8Q13216 396 aa3.09□□□□□ -1.91
HMGB1P16-201ENST00000447155 GUSBP11Q6P575 273 aa3.09□□□□□ -1.91
HMGB1P16-201ENST00000447155 SDIM1Q6ZPB5 146 aa3.09□□□□□ -1.91
HMGB1P16-201ENST00000447155 FAM216BQ8N7L0 139 aa3.09□□□□□ -1.91
HMGB1P16-201ENST00000447155 IMMP1LQ96LU5 166 aa3.09□□□□□ -1.91
HMGB1P16-201ENST00000447155 LINC00574Q9H8X3 128 aa3.09□□□□□ -1.91
HMGB1P16-201ENST00000447155 MED12Q93074 2177 aa3.09□□□□□ -1.91
HMGB1P16-201ENST00000447155 RTTNQ86VV8 2226 aa3.09□□□□□ -1.91
HMGB1P16-201ENST00000447155 IGKV1D-17A0A075B6S4 117 aa3.08□□□□□ -1.92
HMGB1P16-201ENST00000447155 IGKV2-40A0A087WW87 121 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P16-201ENST00000447155 hADV29S1A0JD25 119 aa3.08□□□□□ -1.92
HMGB1P16-201ENST00000447155 KLLNB2CW77 178 aa3.08□□□□□ -1.92
HMGB1P16-201ENST00000447155 IGKV2D-40P01614 121 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P16-201ENST00000447155 PFN2P35080 140 aa3.08□□□□□ -1.92
HMGB1P16-201ENST00000447155 HIST1H4AP62805 103 aaKnown RBP3.08□□□□□ -1.92
HMGB1P16-201ENST00000447155 KLRB1Q12918 225 aa3.08□□□□□ -1.92
HMGB1P16-201ENST00000447155 RHOHQ15669 191 aa3.08□□□□□ -1.92
HMGB1P16-201ENST00000447155 Q6JHZ5 121 aa3.08□□□□□ -1.92
HMGB1P16-201ENST00000447155 ZNF826PQ6ZT77 177 aa3.08□□□□□ -1.92
HMGB1P16-201ENST00000447155 ASCL5Q7RTU5 278 aa3.08□□□□□ -1.92
HMGB1P16-201ENST00000447155 LINC00311Q8N616 119 aa3.08□□□□□ -1.92
HMGB1P16-201ENST00000447155 AGPAT4-IT1Q9H0P7 198 aa3.08□□□□□ -1.92
HMGB1P16-201ENST00000447155 PROK2Q9HC23 129 aa3.08□□□□□ -1.92
HMGB1P16-201ENST00000447155 SERP1Q9Y6X1 66 aa3.08□□□□□ -1.92
HMGB1P16-201ENST00000447155 FREM1Q5H8C1 2179 aa3.08□□□□□ -1.92
HMGB1P16-201ENST00000447155 PI4KAP42356 2102 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 TNCP24821 2201 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 ASCC3Q8N3C0 2202 aaKnown RBP3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 IGHV3-64DA0A0J9YX35 117 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 TINCRA0A1B0GVN0 87 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 KNCNA6PVL3 124 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 J3QLI3 93 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 COX7A2LO14548 114 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 TIMM17BO60830 172 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 IGHG2P01859 326 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 MGPP08493 103 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 S100A4P26447 101 aaKnown RBP3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 PSMB8P28062 276 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 CRIP1P50238 77 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 NDPQ00604 133 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 CIRBPQ14011 172 aaKnown RBP3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 MIAQ16674 131 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 C10orf55Q5SWW7 151 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 HCP5Q6MZN7 132 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 HRCT1Q6UXD1 115 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 Q6ZT83 130 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 C3orf56Q8N813 242 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 LINC01006Q8NI28 216 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 Q8TAT8 98 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 LEAP2Q969E1 77 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 DPH3Q96FX2 82 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 RNF5Q99942 180 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 TMEM243Q9BU79 118 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 TIMM21Q9BVV7 248 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 PLA2G2FQ9BZM2 168 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 TP53TG1Q9Y2A0 90 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 LENEPQ9Y5L5 61 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 COL27A1Q8IZC6 1860 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 PRR14LQ5THK1 2151 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 INTS1Q8N201 2190 aaKnown RBP3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 CACNA1GO43497 2377 aa3.07□□□□□ -1.92
HMGB1P16-201ENST00000447155 A0A0C4DFX4 3053 aa3.06□□□□□ -1.92
HMGB1P16-201ENST00000447155 IGLV4-69A0A075B6H9 119 aa3.06□□□□□ -1.92
HMGB1P16-201ENST00000447155 TRAV12-2A0A075B6T6 113 aa3.06□□□□□ -1.92
HMGB1P16-201ENST00000447155 IGHV1OR15-9A0A0B4J2B8 117 aa3.06□□□□□ -1.92
HMGB1P16-201ENST00000447155 A0A0J9YXY3 114 aa3.06□□□□□ -1.92
HMGB1P16-201ENST00000447155 TMEM223A0PJW6 202 aa3.06□□□□□ -1.92
HMGB1P16-201ENST00000447155 RBMY1BA6NDE4 496 aaKnown RBP3.06□□□□□ -1.92
HMGB1P16-201ENST00000447155 RBMY1EA6NEQ0 496 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms