RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 CACNA1BQ00975 2339 aa6.29□□□□□ -1.4
MCF2L2-203ENST00000447025 TRAV22A0A0B4J277 110 aa6.28□□□□□ -1.4
MCF2L2-203ENST00000447025 BAALC-AS2P0C853 105 aa6.28□□□□□ -1.4
MCF2L2-203ENST00000447025 INTS1Q8N201 2190 aaKnown RBP6.28□□□□□ -1.4
MCF2L2-203ENST00000447025 COL4A2P08572 1712 aa6.28□□□□□ -1.4
MCF2L2-203ENST00000447025 CACNA1EQ15878 2313 aa6.28□□□□□ -1.4
MCF2L2-203ENST00000447025 hDV103S1A0JD37 113 aa6.28□□□□□ -1.4
MCF2L2-203ENST00000447025 KIAA0087Q14695 138 aa6.28□□□□□ -1.4
MCF2L2-203ENST00000447025 Q6ZTC4 211 aa6.28□□□□□ -1.4
MCF2L2-203ENST00000447025 Q86TA4 180 aa6.28□□□□□ -1.4
MCF2L2-203ENST00000447025 SPINK9Q5DT21 86 aa6.27□□□□□ -1.41
MCF2L2-203ENST00000447025 TMEM141Q96I45 108 aa6.27□□□□□ -1.41
MCF2L2-203ENST00000447025 IGKV1-12A0A0C4DH73 117 aa6.26□□□□□ -1.41
MCF2L2-203ENST00000447025 IGIPA6NJ69 53 aa6.26□□□□□ -1.41
MCF2L2-203ENST00000447025 M0R3E3 92 aa6.26□□□□□ -1.41
MCF2L2-203ENST00000447025 NTN3O00634 580 aaPredicted RBP6.26□□□□□ -1.41
MCF2L2-203ENST00000447025 ERC2-IT1O76042 136 aa6.26□□□□□ -1.41
MCF2L2-203ENST00000447025 IGKV1D-12P01611 117 aa6.26□□□□□ -1.41
MCF2L2-203ENST00000447025 IGKV1-16P04430 117 aa6.26□□□□□ -1.41
MCF2L2-203ENST00000447025 DAZAP2Q15038 168 aaPredicted RBP6.26□□□□□ -1.41
MCF2L2-203ENST00000447025 Q8IYB0 196 aa6.26□□□□□ -1.41
MCF2L2-203ENST00000447025 RNF185Q96GF1 192 aa6.26□□□□□ -1.41
MCF2L2-203ENST00000447025 ZFHX4Q86UP3 3567 aa6.26□□□□□ -1.41
MCF2L2-203ENST00000447025 LRRK1Q38SD2 2015 aa6.26□□□□□ -1.41
MCF2L2-203ENST00000447025 A0A0J9YX75 114 aa6.26□□□□□ -1.41
MCF2L2-203ENST00000447025 C10orf142B7Z368 130 aa6.26□□□□□ -1.41
MCF2L2-203ENST00000447025 M0R1W7 72 aa6.26□□□□□ -1.41
MCF2L2-203ENST00000447025 PSPHP1O15172 72 aa6.26□□□□□ -1.41
MCF2L2-203ENST00000447025 GYPEP15421 78 aa6.26□□□□□ -1.41
MCF2L2-203ENST00000447025 LYZL1Q6UWQ5 148 aa6.26□□□□□ -1.41
MCF2L2-203ENST00000447025 ESM1Q9NQ30 184 aa6.26□□□□□ -1.41
MCF2L2-203ENST00000447025 ZFHX2Q9C0A1 2572 aaPredicted RBP6.26□□□□□ -1.41
MCF2L2-203ENST00000447025 MUC22E2RYF6 1773 aaPredicted RBP6.25□□□□□ -1.41
MCF2L2-203ENST00000447025 IGKV1-27A0A075B6S5 117 aa6.25□□□□□ -1.41
MCF2L2-203ENST00000447025 TRBV7-4A0A0J9YYF1 115 aa6.25□□□□□ -1.41
MCF2L2-203ENST00000447025 LOC100131303A0A0U1RQF7 123 aa6.25□□□□□ -1.41
MCF2L2-203ENST00000447025 SDHAF1A6NFY7 115 aa6.25□□□□□ -1.41
MCF2L2-203ENST00000447025 PRYO14603 147 aa6.25□□□□□ -1.41
MCF2L2-203ENST00000447025 ALPK2Q86TB3 2170 aa6.25□□□□□ -1.41
MCF2L2-203ENST00000447025 ARHGAP32A7KAX9 2087 aa6.25□□□□□ -1.41
MCF2L2-203ENST00000447025 A8MU10 97 aa6.25□□□□□ -1.41
MCF2L2-203ENST00000447025 KLF14Q8TD94 323 aaPredicted RBP6.25□□□□□ -1.41
MCF2L2-203ENST00000447025 ASXL3Q9C0F0 2248 aa6.25□□□□□ -1.41
MCF2L2-203ENST00000447025 PRRC2AP48634 2157 aaKnown RBP6.25□□□□□ -1.41
MCF2L2-203ENST00000447025 CNOT1A5YKK6 2376 aaKnown RBP6.25□□□□□ -1.41
MCF2L2-203ENST00000447025 PTPRZ1P23471 2315 aaPredicted RBP6.24□□□□□ -1.41
MCF2L2-203ENST00000447025 TRGV8A0A0C4DH27 118 aa6.24□□□□□ -1.41
MCF2L2-203ENST00000447025 ZNF503-AS2A6NEH8 195 aa6.24□□□□□ -1.41
MCF2L2-203ENST00000447025 C11orf86A6NJI1 115 aa6.24□□□□□ -1.41
MCF2L2-203ENST00000447025 S100A4P26447 101 aaKnown RBP6.24□□□□□ -1.41
MCF2L2-203ENST00000447025 TSPEAR-AS2P59090 65 aa6.24□□□□□ -1.41
MCF2L2-203ENST00000447025 OBSCN-AS1Q96MR7 158 aa6.24□□□□□ -1.41
MCF2L2-203ENST00000447025 NDUFA12Q9UI09 145 aa6.24□□□□□ -1.41
MCF2L2-203ENST00000447025 GNRH2O43555 120 aa6.24□□□□□ -1.41
MCF2L2-203ENST00000447025 C15orf32Q32M92 178 aa6.24□□□□□ -1.41
MCF2L2-203ENST00000447025 SCGB3A1Q96QR1 104 aa6.24□□□□□ -1.41
MCF2L2-203ENST00000447025 IGHV5-10-1A0A0J9YXX1 117 aa6.23□□□□□ -1.41
MCF2L2-203ENST00000447025 EIF4EBP1Q13541 118 aaPredicted RBP6.23□□□□□ -1.41
MCF2L2-203ENST00000447025 SPTSSBQ8NFR3 76 aa6.23□□□□□ -1.41
MCF2L2-203ENST00000447025 FREM1Q5H8C1 2179 aa6.23□□□□□ -1.41
MCF2L2-203ENST00000447025 MED12Q93074 2177 aa6.23□□□□□ -1.41
MCF2L2-203ENST00000447025 C6orf99Q4VX62 202 aa6.23□□□□□ -1.41
MCF2L2-203ENST00000447025 PATE2Q6UY27 113 aa6.23□□□□□ -1.41
MCF2L2-203ENST00000447025 LHBP01229 141 aa6.22□□□□□ -1.41
MCF2L2-203ENST00000447025 PRR3P79522 188 aaKnown RBP6.22□□□□□ -1.41
MCF2L2-203ENST00000447025 DEFB119Q8N690 84 aa6.22□□□□□ -1.41
MCF2L2-203ENST00000447025 FRYQ5TBA9 3013 aa6.22□□□□□ -1.41
MCF2L2-203ENST00000447025 HCG22E2RYF7 251 aa6.22□□□□□ -1.41
MCF2L2-203ENST00000447025 PI4KAP42356 2102 aa6.22□□□□□ -1.41
MCF2L2-203ENST00000447025 Q5VV11 94 aa6.22□□□□□ -1.41
MCF2L2-203ENST00000447025 C17orf98A8MV24 154 aa6.21□□□□□ -1.42
MCF2L2-203ENST00000447025 ENHOQ6UWT2 76 aa6.21□□□□□ -1.42
MCF2L2-203ENST00000447025 SMAD5-AS1Q9Y6J3 95 aa6.21□□□□□ -1.42
MCF2L2-203ENST00000447025 CEP192Q8TEP8 1941 aa6.21□□□□□ -1.42
MCF2L2-203ENST00000447025 ZNF292O60281 2723 aa6.21□□□□□ -1.42
MCF2L2-203ENST00000447025 IGLV3-12A0A075B6K2 115 aa6.21□□□□□ -1.42
MCF2L2-203ENST00000447025 IGLV2-11P01706 119 aa6.21□□□□□ -1.42
MCF2L2-203ENST00000447025 PRM2P04554 102 aa6.21□□□□□ -1.42
MCF2L2-203ENST00000447025 TET2Q6N021 2002 aaPredicted RBP6.21□□□□□ -1.42
MCF2L2-203ENST00000447025 C18orf65Q6ZTR6 163 aa6.21□□□□□ -1.42
MCF2L2-203ENST00000447025 TMEM61Q8N0U2 210 aa6.21□□□□□ -1.42
MCF2L2-203ENST00000447025 C19orf73Q9NVV2 129 aa6.21□□□□□ -1.42
MCF2L2-203ENST00000447025 ZNF706Q9Y5V0 76 aaPredicted RBP6.21□□□□□ -1.42
MCF2L2-203ENST00000447025 BOD1L1Q8NFC6 3051 aa6.2□□□□□ -1.42
MCF2L2-203ENST00000447025 GVINP1Q7Z2Y8 2422 aa6.2□□□□□ -1.42
MCF2L2-203ENST00000447025 TRAV12-3A0A0B4J271 114 aa6.2□□□□□ -1.42
MCF2L2-203ENST00000447025 LEPROTO15243 131 aa6.2□□□□□ -1.42
MCF2L2-203ENST00000447025 BRWD1-AS2P59051 145 aa6.2□□□□□ -1.42
MCF2L2-203ENST00000447025 B3GALT5-AS1P59052 145 aa6.2□□□□□ -1.42
MCF2L2-203ENST00000447025 TMEM14BQ9NUH8 114 aa6.2□□□□□ -1.42
MCF2L2-203ENST00000447025 CEP250Q9BV73 2442 aa6.2□□□□□ -1.42
MCF2L2-203ENST00000447025 IGLV4-69A0A075B6H9 119 aa6.2□□□□□ -1.42
MCF2L2-203ENST00000447025 IGHV3OR16-9A0A0B4J2B5 98 aa6.2□□□□□ -1.42
MCF2L2-203ENST00000447025 IGLV3-19P01714 112 aa6.2□□□□□ -1.42
MCF2L2-203ENST00000447025 Q6ZSV7 163 aa6.2□□□□□ -1.42
MCF2L2-203ENST00000447025 TMEM254Q8TBM7 123 aa6.2□□□□□ -1.42
MCF2L2-203ENST00000447025 IGKV1OR2-108A0A075B7D4 117 aa6.19□□□□□ -1.42
MCF2L2-203ENST00000447025 C12orf77C9JDV5 145 aa6.19□□□□□ -1.42
MCF2L2-203ENST00000447025 C10orf113Q5VZT2 155 aa6.19□□□□□ -1.42
MCF2L2-203ENST00000447025 C17orf82Q86X59 251 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 318 ms