RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 UFSP1Q6NVU6 142 aa5.18□□□□□ -1.58
CD44-211ENST00000442151 Q6ZSN1 163 aa5.18□□□□□ -1.58
CD44-211ENST00000442151 DAZAP1Q96EP5 407 aaKnown RBP5.18□□□□□ -1.58
CD44-211ENST00000442151 SAMD10Q9BYL1 202 aa5.18□□□□□ -1.58
CD44-211ENST00000442151 H7C1H1 209 aa5.18□□□□□ -1.58
CD44-211ENST00000442151 CRPP02741 224 aa5.18□□□□□ -1.58
CD44-211ENST00000442151 LINC00694P0DN24 101 aa5.18□□□□□ -1.58
CD44-211ENST00000442151 CRIP1P50238 77 aa5.18□□□□□ -1.58
CD44-211ENST00000442151 DAZ4Q86SG3 579 aaKnown RBP5.18□□□□□ -1.58
CD44-211ENST00000442151 NIT1Q86X76 327 aa5.18□□□□□ -1.58
CD44-211ENST00000442151 C14orf178Q8N769 122 aaPredicted RBP5.18□□□□□ -1.58
CD44-211ENST00000442151 OR10G8Q8NGN5 311 aa5.18□□□□□ -1.58
CD44-211ENST00000442151 FAM213BQ8TBF2 198 aa5.18□□□□□ -1.58
CD44-211ENST00000442151 MANBALQ9NQG1 85 aa5.18□□□□□ -1.58
CD44-211ENST00000442151 DAZ3Q9NR90 486 aaKnown RBP5.18□□□□□ -1.58
CD44-211ENST00000442151 CYTL1Q9NRR1 136 aa5.18□□□□□ -1.58
CD44-211ENST00000442151 IGKV2D-24A0A075B6R9 120 aa5.17□□□□□ -1.58
CD44-211ENST00000442151 TMSB15BA0A087X1C1 80 aa5.17□□□□□ -1.58
CD44-211ENST00000442151 F5H697 171 aa5.17□□□□□ -1.58
CD44-211ENST00000442151 IFNA1P01562 189 aa5.17□□□□□ -1.58
CD44-211ENST00000442151 ZNF56Q15929 161 aa5.17□□□□□ -1.58
CD44-211ENST00000442151 DNAJC30Q96LL9 226 aa5.17□□□□□ -1.58
CD44-211ENST00000442151 C1orf43Q9BWL3 253 aa5.17□□□□□ -1.58
CD44-211ENST00000442151 A0A087WWL8 130 aa5.16□□□□□ -1.58
CD44-211ENST00000442151 BCL2L11O43521 198 aa5.16□□□□□ -1.58
CD44-211ENST00000442151 OR5AL1P0C617 328 aa5.16□□□□□ -1.58
CD44-211ENST00000442151 TAGLN2P37802 199 aaKnown RBP5.16□□□□□ -1.58
CD44-211ENST00000442151 CACNG7P62955 275 aa5.16□□□□□ -1.58
CD44-211ENST00000442151 TMUB2Q71RG4 321 aa5.16□□□□□ -1.58
CD44-211ENST00000442151 UBE2WQ96B02 151 aa5.16□□□□□ -1.58
CD44-211ENST00000442151 SMIM12Q96EX1 92 aa5.16□□□□□ -1.58
CD44-211ENST00000442151 JPT2Q9H910 190 aa5.16□□□□□ -1.58
CD44-211ENST00000442151 KLK12Q9UKR0 248 aa5.16□□□□□ -1.58
CD44-211ENST00000442151 LRP1BQ9NZR2 4599 aa5.16□□□□□ -1.58
CD44-211ENST00000442151 TRBV6-8A0A0A6YYG3 113 aa5.16□□□□□ -1.58
CD44-211ENST00000442151 SMR3BP02814 79 aaPredicted RBP5.16□□□□□ -1.58
CD44-211ENST00000442151 UBE2D3P61077 147 aa5.16□□□□□ -1.58
CD44-211ENST00000442151 UBE2D2P62837 147 aa5.16□□□□□ -1.58
CD44-211ENST00000442151 AP1S3Q96PC3 154 aa5.16□□□□□ -1.58
CD44-211ENST00000442151 F2Z2F3 143 aa5.15□□□□□ -1.59
CD44-211ENST00000442151 SNAI2O43623 268 aa5.15□□□□□ -1.59
CD44-211ENST00000442151 FUSP35637 526 aaKnown RBP eCLIP5.15□□□□□ -1.59
CD44-211ENST00000442151 BAALCQ8WXS3 180 aa5.15□□□□□ -1.59
CD44-211ENST00000442151 CHCHD5Q9BSY4 110 aa5.15□□□□□ -1.59
CD44-211ENST00000442151 TRBV25-1A0A075B6N4 114 aa5.14□□□□□ -1.59
CD44-211ENST00000442151 PDE6DO43924 150 aa5.14□□□□□ -1.59
CD44-211ENST00000442151 TRGC1P0CF51 173 aa5.14□□□□□ -1.59
CD44-211ENST00000442151 MIAQ16674 131 aa5.14□□□□□ -1.59
CD44-211ENST00000442151 DGAT2L7PQ6IED9 249 aa5.14□□□□□ -1.59
CD44-211ENST00000442151 DEFB104AQ8WTQ1 72 aa5.14□□□□□ -1.59
CD44-211ENST00000442151 MLST8Q9BVC4 326 aa5.14□□□□□ -1.59
CD44-211ENST00000442151 AP5S1Q9NUS5 200 aa5.14□□□□□ -1.59
CD44-211ENST00000442151 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.13□□□□□ -1.59
CD44-211ENST00000442151 TRAV1-1A0A0B4J248 108 aa5.13□□□□□ -1.59
CD44-211ENST00000442151 ANGP03950 147 aaKnown RBP5.13□□□□□ -1.59
CD44-211ENST00000442151 GZMBP10144 247 aa5.13□□□□□ -1.59
CD44-211ENST00000442151 PRR27Q6MZM9 219 aa5.13□□□□□ -1.59
CD44-211ENST00000442151 WDR73Q6P4I2 378 aa5.13□□□□□ -1.59
CD44-211ENST00000442151 ATRAIDQ6UW56 229 aa5.13□□□□□ -1.59
CD44-211ENST00000442151 IGHV1-24A0A0C4DH33 117 aa5.13□□□□□ -1.59
CD44-211ENST00000442151 FER1L6-AS1Q8NA97 138 aa5.13□□□□□ -1.59
CD44-211ENST00000442151 DERL1Q9BUN8 251 aa5.13□□□□□ -1.59
CD44-211ENST00000442151 GNG13Q9P2W3 67 aa5.13□□□□□ -1.59
CD44-211ENST00000442151 VAX2Q9UIW0 290 aa5.13□□□□□ -1.59
CD44-211ENST00000442151 TRAV8-4A0A0B4J246 113 aa5.12□□□□□ -1.59
CD44-211ENST00000442151 G3V3Q6 166 aa5.12□□□□□ -1.59
CD44-211ENST00000442151 P01737 135 aa5.12□□□□□ -1.59
CD44-211ENST00000442151 RPL35P42766 123 aaKnown RBP5.12□□□□□ -1.59
CD44-211ENST00000442151 GNG4P50150 75 aa5.12□□□□□ -1.59
CD44-211ENST00000442151 LINC00310P59036 64 aa5.12□□□□□ -1.59
CD44-211ENST00000442151 CCL20P78556 96 aa5.12□□□□□ -1.59
CD44-211ENST00000442151 Q6ZSA8 131 aa5.12□□□□□ -1.59
CD44-211ENST00000442151 SMIM15Q7Z3B0 74 aa5.12□□□□□ -1.59
CD44-211ENST00000442151 C15orf54Q8N8G6 183 aa5.12□□□□□ -1.59
CD44-211ENST00000442151 NEXN-AS1Q8NBZ9 246 aa5.12□□□□□ -1.59
CD44-211ENST00000442151 C11orf52Q96A22 123 aa5.12□□□□□ -1.59
CD44-211ENST00000442151 A0A1B0GV50 99 aa5.11□□□□□ -1.59
CD44-211ENST00000442151 LECT2O14960 151 aa5.11□□□□□ -1.59
CD44-211ENST00000442151 OR2D3Q8NGH3 330 aa5.11□□□□□ -1.59
CD44-211ENST00000442151 OR10AG1Q8NH19 301 aa5.11□□□□□ -1.59
CD44-211ENST00000442151 APOBP04114 4563 aaKnown RBP5.11□□□□□ -1.59
CD44-211ENST00000442151 UBE2L6O14933 153 aa5.11□□□□□ -1.59
CD44-211ENST00000442151 RPL19P84098 196 aaKnown RBP5.11□□□□□ -1.59
CD44-211ENST00000442151 FAM210AQ96ND0 272 aa5.11□□□□□ -1.59
CD44-211ENST00000442151 CHAC1Q9BUX1 264 aa5.11□□□□□ -1.59
CD44-211ENST00000442151 MED9Q9NWA0 146 aa5.11□□□□□ -1.59
CD44-211ENST00000442151 DNAH5Q8TE73 4624 aa5.11□□□□□ -1.59
CD44-211ENST00000442151 HERC1Q15751 4861 aa5.1□□□□□ -1.59
CD44-211ENST00000442151 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.1□□□□□ -1.59
CD44-211ENST00000442151 SMLR1H3BR10 107 aa5.1□□□□□ -1.59
CD44-211ENST00000442151 IGLV2-8P01709 118 aa5.1□□□□□ -1.59
CD44-211ENST00000442151 MGPP08493 103 aa5.1□□□□□ -1.59
CD44-211ENST00000442151 SULT1A2P50226 295 aa5.1□□□□□ -1.59
CD44-211ENST00000442151 IQCJQ1A5X6 159 aa5.1□□□□□ -1.59
CD44-211ENST00000442151 CENPWQ5EE01 88 aa5.1□□□□□ -1.59
CD44-211ENST00000442151 RASL11AQ6T310 242 aa5.1□□□□□ -1.59
CD44-211ENST00000442151 SLC51BQ86UW2 128 aa5.1□□□□□ -1.59
CD44-211ENST00000442151 TMEM243Q9BU79 118 aa5.1□□□□□ -1.59
CD44-211ENST00000442151 TPPP3Q9BW30 176 aa5.1□□□□□ -1.59
CD44-211ENST00000442151 DPH3P1Q9H4G8 78 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms