RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 ETDBQ3ZM63 59 aa12.13□□□□□ -0.47
PTPN13-204ENST00000436978 GTSF1Q8WW33 167 aa12.13□□□□□ -0.47
PTPN13-204ENST00000436978 PRO0255Q9UI72 69 aa12.13□□□□□ -0.47
PTPN13-204ENST00000436978 OTOGLQ3ZCN5 2332 aa12.13□□□□□ -0.47
PTPN13-204ENST00000436978 PCP2Q8IVA1 136 aa12.13□□□□□ -0.47
PTPN13-204ENST00000436978 HIVEP2P31629 2446 aa12.13□□□□□ -0.47
PTPN13-204ENST00000436978 IGHV4-4A0A075B6R2 117 aa12.12□□□□□ -0.47
PTPN13-204ENST00000436978 DSCAML1Q8TD84 2053 aa12.12□□□□□ -0.47
PTPN13-204ENST00000436978 C11orf45Q8TAV5 145 aa12.12□□□□□ -0.47
PTPN13-204ENST00000436978 PRAC2D3DTV9 90 aa12.12□□□□□ -0.47
PTPN13-204ENST00000436978 TET2Q6N021 2002 aaPredicted RBP12.12□□□□□ -0.47
PTPN13-204ENST00000436978 H7C423 109 aa12.11□□□□□ -0.47
PTPN13-204ENST00000436978 LYRM9A8MSI8 78 aa12.11□□□□□ -0.47
PTPN13-204ENST00000436978 VSIG2Q96IQ7 327 aa12.11□□□□□ -0.47
PTPN13-204ENST00000436978 GAGE12HA6NDE8 117 aa12.11□□□□□ -0.47
PTPN13-204ENST00000436978 MAJINQ3KP22 176 aa12.11□□□□□ -0.47
PTPN13-204ENST00000436978 TRBV12-3P01733 135 aa12.1□□□□□ -0.47
PTPN13-204ENST00000436978 SPAG11BQ08648 103 aa12.1□□□□□ -0.47
PTPN13-204ENST00000436978 IGF1P05019 195 aa12.1□□□□□ -0.47
PTPN13-204ENST00000436978 UNQ9165/PRO28630Q6UXU0 137 aa12.1□□□□□ -0.47
PTPN13-204ENST00000436978 COA6Q5JTJ3 125 aaKnown RBP12.1□□□□□ -0.47
PTPN13-204ENST00000436978 MUSTN1Q8IVN3 82 aa12.1□□□□□ -0.47
PTPN13-204ENST00000436978 E7EUB6 86 aa12.1□□□□□ -0.47
PTPN13-204ENST00000436978 HIGD1BQ9P298 99 aa12.1□□□□□ -0.47
PTPN13-204ENST00000436978 CCL25O15444 150 aa12.09□□□□□ -0.47
PTPN13-204ENST00000436978 FANCD2OSQ96PS1 177 aa12.09□□□□□ -0.47
PTPN13-204ENST00000436978 TMEM61Q8N0U2 210 aa12.09□□□□□ -0.47
PTPN13-204ENST00000436978 LMO4P61968 165 aa12.09□□□□□ -0.47
PTPN13-204ENST00000436978 RPL39P62891 51 aaKnown RBP12.09□□□□□ -0.47
PTPN13-204ENST00000436978 IGLL5B9A064 214 aa12.09□□□□□ -0.47
PTPN13-204ENST00000436978 E9PLD3 99 aa12.08□□□□□ -0.48
PTPN13-204ENST00000436978 DIRC1Q969H9 104 aa12.08□□□□□ -0.48
PTPN13-204ENST00000436978 IGHV1-58A0A0C4DH39 117 aa12.08□□□□□ -0.48
PTPN13-204ENST00000436978 KIR2DL5BA0A0G2JN68 375 aa12.08□□□□□ -0.48
PTPN13-204ENST00000436978 KIR2DL5BA0A0G2JPC4 375 aa12.08□□□□□ -0.48
PTPN13-204ENST00000436978 KIR2DL5AQ8N109 375 aa12.08□□□□□ -0.48
PTPN13-204ENST00000436978 HILS1P60008 231 aa12.08□□□□□ -0.48
PTPN13-204ENST00000436978 CCDC140Q96MF4 163 aa12.08□□□□□ -0.48
PTPN13-204ENST00000436978 MSRB1Q9NZV6 116 aa12.08□□□□□ -0.48
PTPN13-204ENST00000436978 A0A0J9YXV3 536 aa12.08□□□□□ -0.48
PTPN13-204ENST00000436978 CRYBA4P53673 196 aa12.08□□□□□ -0.48
PTPN13-204ENST00000436978 B9D2Q9BPU9 175 aa12.08□□□□□ -0.48
PTPN13-204ENST00000436978 NCR3O14931 201 aa12.08□□□□□ -0.48
PTPN13-204ENST00000436978 ARHGAP32A7KAX9 2087 aa12.08□□□□□ -0.48
PTPN13-204ENST00000436978 MDFICQ9P1T7 246 aa12.08□□□□□ -0.48
PTPN13-204ENST00000436978 KLK12Q9UKR0 248 aa12.08□□□□□ -0.48
PTPN13-204ENST00000436978 ESM1Q9NQ30 184 aa12.07□□□□□ -0.48
PTPN13-204ENST00000436978 JMJD7-PLA2G4BH0Y9G9 81 aa12.07□□□□□ -0.48
PTPN13-204ENST00000436978 NTN5Q8WTR8 489 aaPredicted RBP12.06□□□□□ -0.48
PTPN13-204ENST00000436978 TMEM256-PLSCR3K7ERE1 68 aa12.06□□□□□ -0.48
PTPN13-204ENST00000436978 TMEM258P61165 79 aa12.06□□□□□ -0.48
PTPN13-204ENST00000436978 DEFB125Q8N687 156 aa12.06□□□□□ -0.48
PTPN13-204ENST00000436978 A4D1N5 150 aa12.05□□□□□ -0.48
PTPN13-204ENST00000436978 DEFB4AO15263 64 aa12.05□□□□□ -0.48
PTPN13-204ENST00000436978 MSMPQ1L6U9 139 aa12.05□□□□□ -0.48
PTPN13-204ENST00000436978 A0A0B4J2C4 111 aa12.05□□□□□ -0.48
PTPN13-204ENST00000436978 ZNF843Q8N446 348 aa12.05□□□□□ -0.48
PTPN13-204ENST00000436978 C19orf71A6NCJ1 209 aa12.04□□□□□ -0.48
PTPN13-204ENST00000436978 LINC01620Q4KN68 170 aa12.04□□□□□ -0.48
PTPN13-204ENST00000436978 MP68P56378 58 aa12.04□□□□□ -0.48
PTPN13-204ENST00000436978 NREPQ16612 68 aa12.04□□□□□ -0.48
PTPN13-204ENST00000436978 P0C879 139 aa12.04□□□□□ -0.48
PTPN13-204ENST00000436978 CHKB-CPT1BH3BT56 60 aa12.03□□□□□ -0.48
PTPN13-204ENST00000436978 HIGD2BQ4VC39 106 aa12.03□□□□□ -0.48
PTPN13-204ENST00000436978 PDE6GP18545 87 aa12.03□□□□□ -0.48
PTPN13-204ENST00000436978 SHISA2Q6UWI4 295 aa12.03□□□□□ -0.48
PTPN13-204ENST00000436978 IGKV1D-37A0A075B6S9 117 aa12.02□□□□□ -0.48
PTPN13-204ENST00000436978 C19orf84I3L1E1 186 aa12.02□□□□□ -0.49
PTPN13-204ENST00000436978 PRO3102Q9H379 93 aa12.02□□□□□ -0.49
PTPN13-204ENST00000436978 SPATA25Q9BR10 227 aa12.02□□□□□ -0.49
PTPN13-204ENST00000436978 NPSP0C0P6 89 aa12.02□□□□□ -0.49
PTPN13-204ENST00000436978 KIR2DL5BQ8NHK3 375 aa12.02□□□□□ -0.49
PTPN13-204ENST00000436978 C11orf1Q9H5F2 150 aa12.01□□□□□ -0.49
PTPN13-204ENST00000436978 ODF1Q14990 250 aa12.01□□□□□ -0.49
PTPN13-204ENST00000436978 TRAV26-1A0A087WT03 109 aa12.01□□□□□ -0.49
PTPN13-204ENST00000436978 C20orf203Q8NBC4 194 aa12.01□□□□□ -0.49
PTPN13-204ENST00000436978 RBM3P98179 157 aaKnown RBP12□□□□□ -0.49
PTPN13-204ENST00000436978 DEFB114Q30KQ6 69 aa12□□□□□ -0.49
PTPN13-204ENST00000436978 ZFAND2AQ8N6M9 145 aa12□□□□□ -0.49
PTPN13-204ENST00000436978 C11orf71Q6IPW1 123 aa12□□□□□ -0.49
PTPN13-204ENST00000436978 RNF183Q96D59 192 aa12□□□□□ -0.49
PTPN13-204ENST00000436978 IGHV4-28A0A0C4DH34 117 aa12□□□□□ -0.49
PTPN13-204ENST00000436978 MIFP14174 115 aa12□□□□□ -0.49
PTPN13-204ENST00000436978 SMIM20Q8N5G0 67 aa12□□□□□ -0.49
PTPN13-204ENST00000436978 UFSP1Q6NVU6 142 aa11.99□□□□□ -0.49
PTPN13-204ENST00000436978 DAND5Q8N907 189 aa11.99□□□□□ -0.49
PTPN13-204ENST00000436978 CRYGDP07320 174 aa11.99□□□□□ -0.49
PTPN13-204ENST00000436978 MIR7-3HGQ8N6C7 128 aa11.99□□□□□ -0.49
PTPN13-204ENST00000436978 CSPG4Q6UVK1 2322 aa11.99□□□□□ -0.49
PTPN13-204ENST00000436978 COX7BP24311 80 aa11.98□□□□□ -0.49
PTPN13-204ENST00000436978 REG3AQ06141 175 aa11.98□□□□□ -0.49
PTPN13-204ENST00000436978 A0A1B0GX51 115 aa11.98□□□□□ -0.49
PTPN13-204ENST00000436978 LY6LH3BQJ8 138 aa11.98□□□□□ -0.49
PTPN13-204ENST00000436978 INAFM1C9JVW0 142 aa11.98□□□□□ -0.49
PTPN13-204ENST00000436978 CRYGBP07316 175 aa11.98□□□□□ -0.49
PTPN13-204ENST00000436978 MIAQ16674 131 aa11.98□□□□□ -0.49
PTPN13-204ENST00000436978 K7EQG2 157 aa11.98□□□□□ -0.49
PTPN13-204ENST00000436978 EBI3Q14213 229 aa11.98□□□□□ -0.49
PTPN13-204ENST00000436978 ANKRD39Q53RE8 183 aa11.98□□□□□ -0.49
PTPN13-204ENST00000436978 ATOX1O00244 68 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms