RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 CEMP1Q6PRD7 247 aaPredicted RBP7.9□□□□□ -1.15
SCAF4-203ENST00000434667 EEF1AKMT3Q96AZ1 226 aa7.9□□□□□ -1.15
SCAF4-203ENST00000434667 DPH3P1Q9H4G8 78 aa7.9□□□□□ -1.15
SCAF4-203ENST00000434667 TRAV21A0A0B4J279 112 aa7.89□□□□□ -1.15
SCAF4-203ENST00000434667 M0R2P5 195 aa7.89□□□□□ -1.15
SCAF4-203ENST00000434667 TOMM6Q96B49 74 aa7.89□□□□□ -1.15
SCAF4-203ENST00000434667 EIF4EBP3O60516 100 aaPredicted RBP7.89□□□□□ -1.15
SCAF4-203ENST00000434667 IFITM1P13164 125 aa7.89□□□□□ -1.15
SCAF4-203ENST00000434667 AJUBAQ96IF1 538 aa7.89□□□□□ -1.15
SCAF4-203ENST00000434667 EPG5Q9HCE0 2579 aa7.89□□□□□ -1.15
SCAF4-203ENST00000434667 CRLF1O75462 422 aa7.89□□□□□ -1.15
SCAF4-203ENST00000434667 IGHV3-53P01767 116 aa7.89□□□□□ -1.15
SCAF4-203ENST00000434667 HOXD3P31249 432 aaPredicted RBP7.89□□□□□ -1.15
SCAF4-203ENST00000434667 NDUFA11Q86Y39 141 aa7.89□□□□□ -1.15
SCAF4-203ENST00000434667 ZNRF2Q8NHG8 242 aa7.89□□□□□ -1.15
SCAF4-203ENST00000434667 CLEC2BQ92478 149 aa7.89□□□□□ -1.15
SCAF4-203ENST00000434667 RNF5Q99942 180 aa7.89□□□□□ -1.15
SCAF4-203ENST00000434667 A0A0J9YXV3 536 aa7.88□□□□□ -1.15
SCAF4-203ENST00000434667 J3QQQ9 107 aa7.88□□□□□ -1.15
SCAF4-203ENST00000434667 LY6G5BQ8NDX9 201 aa7.88□□□□□ -1.15
SCAF4-203ENST00000434667 ODF3BA8MYP8 253 aa7.88□□□□□ -1.15
SCAF4-203ENST00000434667 IGLV4-69A0A075B6H9 119 aa7.88□□□□□ -1.15
SCAF4-203ENST00000434667 TRAV13-1A0A0B4J241 112 aa7.88□□□□□ -1.15
SCAF4-203ENST00000434667 A0A0J9YY99 117 aa7.88□□□□□ -1.15
SCAF4-203ENST00000434667 COX6B1P14854 86 aa7.88□□□□□ -1.15
SCAF4-203ENST00000434667 SPINK13Q1W4C9 94 aa7.88□□□□□ -1.15
SCAF4-203ENST00000434667 TEN1Q86WV5 123 aa7.88□□□□□ -1.15
SCAF4-203ENST00000434667 TRAV4A0A0B4J268 109 aa7.87□□□□□ -1.15
SCAF4-203ENST00000434667 CCDC179H3BU77 68 aa7.87□□□□□ -1.15
SCAF4-203ENST00000434667 PRM2P04554 102 aa7.87□□□□□ -1.15
SCAF4-203ENST00000434667 MUSTN1Q8IVN3 82 aa7.87□□□□□ -1.15
SCAF4-203ENST00000434667 ZFAND2AQ8N6M9 145 aa7.87□□□□□ -1.15
SCAF4-203ENST00000434667 CHCHD5Q9BSY4 110 aa7.87□□□□□ -1.15
SCAF4-203ENST00000434667 TNFRSF18Q9Y5U5 241 aa7.87□□□□□ -1.15
SCAF4-203ENST00000434667 A8MZ25 164 aa7.87□□□□□ -1.15
SCAF4-203ENST00000434667 SAA4P35542 130 aa7.87□□□□□ -1.15
SCAF4-203ENST00000434667 TAL2Q16559 108 aa7.87□□□□□ -1.15
SCAF4-203ENST00000434667 GPHB5Q86YW7 130 aa7.87□□□□□ -1.15
SCAF4-203ENST00000434667 A0A1W2PPR1 153 aa7.87□□□□□ -1.15
SCAF4-203ENST00000434667 UBE2D1P51668 147 aa7.87□□□□□ -1.15
SCAF4-203ENST00000434667 GAGE2AQ6NT46 116 aa7.87□□□□□ -1.15
SCAF4-203ENST00000434667 PMVKQ15126 192 aa7.86□□□□□ -1.15
SCAF4-203ENST00000434667 C9orf153Q5TBE3 101 aa7.86□□□□□ -1.15
SCAF4-203ENST00000434667 ITPR1Q14643 2758 aa7.86□□□□□ -1.15
SCAF4-203ENST00000434667 RNASE3P12724 160 aaKnown RBP7.86□□□□□ -1.15
SCAF4-203ENST00000434667 HIST1H4AP62805 103 aaKnown RBP7.86□□□□□ -1.15
SCAF4-203ENST00000434667 Q8N6K4 173 aa7.86□□□□□ -1.15
SCAF4-203ENST00000434667 SLC50A1Q9BRV3 221 aa7.86□□□□□ -1.15
SCAF4-203ENST00000434667 H3BMM0 161 aa7.85□□□□□ -1.15
SCAF4-203ENST00000434667 UBE2WQ96B02 151 aa7.85□□□□□ -1.15
SCAF4-203ENST00000434667 TRAV12-1A0A0B4J245 112 aa7.85□□□□□ -1.15
SCAF4-203ENST00000434667 HIST2H2BDQ6DRA6 164 aa7.85□□□□□ -1.15
SCAF4-203ENST00000434667 DNAL4O96015 105 aa7.84□□□□□ -1.15
SCAF4-203ENST00000434667 UBE2D3P61077 147 aa7.84□□□□□ -1.15
SCAF4-203ENST00000434667 UBE2D2P62837 147 aa7.84□□□□□ -1.15
SCAF4-203ENST00000434667 ATXN8Q156A1 80 aa7.84□□□□□ -1.15
SCAF4-203ENST00000434667 TCTEX1D4Q5JR98 221 aa7.84□□□□□ -1.15
SCAF4-203ENST00000434667 IGHV3-30P01768 117 aa7.84□□□□□ -1.15
SCAF4-203ENST00000434667 IGHV3-30-5P0DP03 117 aa7.84□□□□□ -1.15
SCAF4-203ENST00000434667 C9orf47Q6ZRZ4 202 aa7.84□□□□□ -1.15
SCAF4-203ENST00000434667 RHPN1-AS1Q9BWJ2 59 aa7.84□□□□□ -1.15
SCAF4-203ENST00000434667 TRBV7-9A0A0J9YWB2 115 aa7.84□□□□□ -1.15
SCAF4-203ENST00000434667 SUMO4Q6EEV6 95 aa7.84□□□□□ -1.15
SCAF4-203ENST00000434667 MAPK1IP1LQ8NDC0 245 aa7.84□□□□□ -1.15
SCAF4-203ENST00000434667 FAM110DQ8TAY7 271 aaPredicted RBP7.84□□□□□ -1.15
SCAF4-203ENST00000434667 NIPBLQ6KC79 2804 aaeCLIP7.84□□□□□ -1.156e-8■■■■■ 30.6
SCAF4-203ENST00000434667 TRAV41A0A0B4J266 112 aa7.83□□□□□ -1.16
SCAF4-203ENST00000434667 VCYO14598 125 aa7.83□□□□□ -1.16
SCAF4-203ENST00000434667 TIMM21Q9BVV7 248 aa7.83□□□□□ -1.16
SCAF4-203ENST00000434667 SRSF2Q01130 221 aaKnown RBP7.83□□□□□ -1.16
SCAF4-203ENST00000434667 Q9UF83 564 aa7.83□□□□□ -1.16
SCAF4-203ENST00000434667 FAM236AA0A1B0GUQ0 79 aa7.83□□□□□ -1.16
SCAF4-203ENST00000434667 FAM236BA0A1B0GV22 79 aa7.83□□□□□ -1.16
SCAF4-203ENST00000434667 P0DMU3 169 aa7.83□□□□□ -1.16
SCAF4-203ENST00000434667 FAM231AP0DMU4 169 aa7.83□□□□□ -1.16
SCAF4-203ENST00000434667 FAM231CP0DMU5 169 aa7.83□□□□□ -1.16
SCAF4-203ENST00000434667 CIRBPQ14011 172 aaKnown RBP7.83□□□□□ -1.16
SCAF4-203ENST00000434667 ITLN2Q8WWU7 325 aaPredicted RBP7.83□□□□□ -1.16
SCAF4-203ENST00000434667 MDFICQ9P1T7 246 aa7.82□□□□□ -1.16
SCAF4-203ENST00000434667 FBN2P35556 2912 aa7.82□□□□□ -1.16
SCAF4-203ENST00000434667 TINCRA0A1B0GVN0 87 aa7.82□□□□□ -1.16
SCAF4-203ENST00000434667 Q8N1Y9 231 aa7.82□□□□□ -1.16
SCAF4-203ENST00000434667 ID1P41134 155 aa7.82□□□□□ -1.16
SCAF4-203ENST00000434667 NDUFA12Q9UI09 145 aa7.82□□□□□ -1.16
SCAF4-203ENST00000434667 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.81□□□□□ -1.16
SCAF4-203ENST00000434667 IGKV2-29A2NJV5 120 aaPredicted RBP7.81□□□□□ -1.16
SCAF4-203ENST00000434667 IGIPA6NJ69 53 aa7.81□□□□□ -1.16
SCAF4-203ENST00000434667 LINC00315P59091 139 aa7.81□□□□□ -1.16
SCAF4-203ENST00000434667 UBE2E2Q96LR5 201 aa7.81□□□□□ -1.16
SCAF4-203ENST00000434667 NPFFO15130 113 aa7.81□□□□□ -1.16
SCAF4-203ENST00000434667 NHLRC4P0CG21 123 aaPredicted RBP7.81□□□□□ -1.16
SCAF4-203ENST00000434667 PROK1P58294 105 aa7.81□□□□□ -1.16
SCAF4-203ENST00000434667 C19orf54Q5BKX5 351 aa7.81□□□□□ -1.16
SCAF4-203ENST00000434667 SHISA2Q6UWI4 295 aa7.81□□□□□ -1.16
SCAF4-203ENST00000434667 IGHV4-4A0A075B6R2 117 aa7.8□□□□□ -1.16
SCAF4-203ENST00000434667 LINC01620Q4KN68 170 aa7.8□□□□□ -1.16
SCAF4-203ENST00000434667 AMELXQ99217 191 aa7.8□□□□□ -1.16
SCAF4-203ENST00000434667 IGKV3D-7A0A0C4DH55 119 aa7.8□□□□□ -1.16
SCAF4-203ENST00000434667 NDUFV3P56181 108 aaKnown RBP7.8□□□□□ -1.16
SCAF4-203ENST00000434667 FLNCQ14315 2725 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms