RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 SCGB2A2Q13296 93 aa6.53□□□□□ -1.36
GABPB1-205ENST00000429662 RRN3P1Q2M238 152 aa6.53□□□□□ -1.36
GABPB1-205ENST00000429662 LYRM7Q5U5X0 104 aa6.53□□□□□ -1.36
GABPB1-205ENST00000429662 SYT8Q8NBV8 401 aa6.53□□□□□ -1.36
GABPB1-205ENST00000429662 TIMM17AQ99595 171 aa6.53□□□□□ -1.36
GABPB1-205ENST00000429662 KIR2DL4Q99706 377 aa6.53□□□□□ -1.36
GABPB1-205ENST00000429662 H3BUX3 64 aa6.52□□□□□ -1.37
GABPB1-205ENST00000429662 PAX4O43316 350 aa6.52□□□□□ -1.37
GABPB1-205ENST00000429662 HOXA3O43365 443 aaPredicted RBP6.52□□□□□ -1.37
GABPB1-205ENST00000429662 TRBV12-3P01733 135 aa6.52□□□□□ -1.37
GABPB1-205ENST00000429662 POLR2KP53803 58 aaKnown RBP6.52□□□□□ -1.37
GABPB1-205ENST00000429662 CFHR3Q02985 330 aa6.52□□□□□ -1.37
GABPB1-205ENST00000429662 PMVKQ15126 192 aa6.52□□□□□ -1.37
GABPB1-205ENST00000429662 CCL19Q99731 98 aa6.52□□□□□ -1.37
GABPB1-205ENST00000429662 NAA38Q9BRA0 125 aaKnown RBP6.52□□□□□ -1.37
GABPB1-205ENST00000429662 KIF25-AS1Q9Y6Z4 181 aa6.52□□□□□ -1.37
GABPB1-205ENST00000429662 BIRC6Q9NR09 4857 aa6.52□□□□□ -1.37
GABPB1-205ENST00000429662 IGHV4-61A0A0C4DH41 118 aa6.51□□□□□ -1.37
GABPB1-205ENST00000429662 LGALS9O00182 355 aa6.51□□□□□ -1.37
GABPB1-205ENST00000429662 GNRH2O43555 120 aa6.51□□□□□ -1.37
GABPB1-205ENST00000429662 SAP30O75446 220 aa6.51□□□□□ -1.37
GABPB1-205ENST00000429662 DUSP14O95147 198 aaKnown RBP6.51□□□□□ -1.37
GABPB1-205ENST00000429662 MSMBP08118 114 aa6.51□□□□□ -1.37
GABPB1-205ENST00000429662 SCGB1A1P11684 91 aa6.51□□□□□ -1.37
GABPB1-205ENST00000429662 RHOHQ15669 191 aa6.51□□□□□ -1.37
GABPB1-205ENST00000429662 RNF152Q8N8N0 203 aa6.51□□□□□ -1.37
GABPB1-205ENST00000429662 RPL39LQ96EH5 51 aaKnown RBP6.51□□□□□ -1.37
GABPB1-205ENST00000429662 PRADC1Q9BSG0 188 aa6.51□□□□□ -1.37
GABPB1-205ENST00000429662 TTTY13Q9BZ97 58 aa6.51□□□□□ -1.37
GABPB1-205ENST00000429662 LINC00527Q9UJ94 153 aa6.51□□□□□ -1.37
GABPB1-205ENST00000429662 ARHGAP32A7KAX9 2087 aa6.51□□□□□ -1.37
GABPB1-205ENST00000429662 IGHV3OR16-10A0A075B7F0 116 aa6.5□□□□□ -1.37
GABPB1-205ENST00000429662 TRBV27A0A0K0K1C4 114 aa6.5□□□□□ -1.37
GABPB1-205ENST00000429662 C11orf86A6NJI1 115 aa6.5□□□□□ -1.37
GABPB1-205ENST00000429662 ZNF815PA8K554 130 aa6.5□□□□□ -1.37
GABPB1-205ENST00000429662 B4DSR2 109 aa6.5□□□□□ -1.37
GABPB1-205ENST00000429662 J3KRW8 73 aa6.5□□□□□ -1.37
GABPB1-205ENST00000429662 K7ERJ3 54 aa6.5□□□□□ -1.37
GABPB1-205ENST00000429662 IGHV3-11P01762 117 aa6.5□□□□□ -1.37
GABPB1-205ENST00000429662 LGALS1P09382 135 aaKnown RBP6.5□□□□□ -1.37
GABPB1-205ENST00000429662 LINC00315P59091 139 aa6.5□□□□□ -1.37
GABPB1-205ENST00000429662 SNRPD3P62318 126 aaKnown RBP6.5□□□□□ -1.37
GABPB1-205ENST00000429662 RPL24P83731 157 aaKnown RBP6.5□□□□□ -1.37
GABPB1-205ENST00000429662 LY6EQ16553 131 aa6.5□□□□□ -1.37
GABPB1-205ENST00000429662 BRD3OSQ6XYD6 125 aa6.5□□□□□ -1.37
GABPB1-205ENST00000429662 ZFP2Q6ZN57 461 aa6.5□□□□□ -1.37
GABPB1-205ENST00000429662 Q6ZQT7 251 aa6.5□□□□□ -1.37
GABPB1-205ENST00000429662 KLK15Q9H2R5 256 aa6.5□□□□□ -1.37
GABPB1-205ENST00000429662 SPANXB1Q9NS25 103 aaPredicted RBP6.5□□□□□ -1.37
GABPB1-205ENST00000429662 WNK1Q9H4A3 2382 aa6.49□□□□□ -1.37
GABPB1-205ENST00000429662 IGIPA6NJ69 53 aa6.49□□□□□ -1.37
GABPB1-205ENST00000429662 IGHV4-38-2P0DP08 117 aa6.49□□□□□ -1.37
GABPB1-205ENST00000429662 GAGE13Q4V321 117 aa6.49□□□□□ -1.37
GABPB1-205ENST00000429662 SUMO4Q6EEV6 95 aa6.49□□□□□ -1.37
GABPB1-205ENST00000429662 SCGB1D4Q6XE38 83 aa6.49□□□□□ -1.37
GABPB1-205ENST00000429662 DCANP1Q8TF63 244 aa6.49□□□□□ -1.37
GABPB1-205ENST00000429662 C9orf85Q96MD7 179 aa6.49□□□□□ -1.37
GABPB1-205ENST00000429662 TRGV11A0A075B6L2 103 aa6.48□□□□□ -1.37
GABPB1-205ENST00000429662 J3QLI3 93 aa6.48□□□□□ -1.37
GABPB1-205ENST00000429662 GHRHP01286 108 aa6.48□□□□□ -1.37
GABPB1-205ENST00000429662 CD7P09564 240 aa6.48□□□□□ -1.37
GABPB1-205ENST00000429662 PSMB8P28062 276 aa6.48□□□□□ -1.37
GABPB1-205ENST00000429662 ATP5J2P56134 94 aa6.48□□□□□ -1.37
GABPB1-205ENST00000429662 SRSF9Q13242 221 aaKnown RBP eCLIP6.48□□□□□ -1.37
GABPB1-205ENST00000429662 NSUN5P1Q3KNT7 163 aa6.48□□□□□ -1.37
GABPB1-205ENST00000429662 TRPT1Q86TN4 253 aaKnown RBP6.48□□□□□ -1.37
GABPB1-205ENST00000429662 ATP6V0E2Q8NHE4 81 aa6.48□□□□□ -1.37
GABPB1-205ENST00000429662 VCX2Q9H322 139 aa6.48□□□□□ -1.37
GABPB1-205ENST00000429662 YAE1D1Q9NRH1 226 aa6.48□□□□□ -1.37
GABPB1-205ENST00000429662 TP53TG1Q9Y2A0 90 aa6.48□□□□□ -1.37
GABPB1-205ENST00000429662 IGHV3-16A0A0C4DH30 117 aa6.47□□□□□ -1.37
GABPB1-205ENST00000429662 A0A0J9YX75 114 aa6.47□□□□□ -1.37
GABPB1-205ENST00000429662 SDHAF1A6NFY7 115 aa6.47□□□□□ -1.37
GABPB1-205ENST00000429662 F5H697 171 aa6.47□□□□□ -1.37
GABPB1-205ENST00000429662 F6UB75 175 aa6.47□□□□□ -1.37
GABPB1-205ENST00000429662 CRYGDP07320 174 aa6.47□□□□□ -1.37
GABPB1-205ENST00000429662 UBE2D1P51668 147 aa6.47□□□□□ -1.37
GABPB1-205ENST00000429662 CRYBA4P53673 196 aa6.47□□□□□ -1.37
GABPB1-205ENST00000429662 BLCAPP62952 87 aa6.47□□□□□ -1.37
GABPB1-205ENST00000429662 CD300EQ496F6 205 aaPredicted RBP6.47□□□□□ -1.37
GABPB1-205ENST00000429662 ZNF876PQ49A33 203 aa6.47□□□□□ -1.37
GABPB1-205ENST00000429662 NFE4Q86UQ8 179 aa6.47□□□□□ -1.37
GABPB1-205ENST00000429662 DLX4Q92988 240 aaPredicted RBP6.47□□□□□ -1.37
GABPB1-205ENST00000429662 EDA2RQ9HAV5 297 aa6.47□□□□□ -1.37
GABPB1-205ENST00000429662 IGLV4-69A0A075B6H9 119 aa6.46□□□□□ -1.37
GABPB1-205ENST00000429662 TRBV20-1A0A075B6N2 111 aa6.46□□□□□ -1.37
GABPB1-205ENST00000429662 IGHV1OR15-1A0A075B7D0 117 aa6.46□□□□□ -1.37
GABPB1-205ENST00000429662 TEX48A0A1B0GUV7 120 aa6.46□□□□□ -1.37
GABPB1-205ENST00000429662 K7EQG2 157 aa6.46□□□□□ -1.37
GABPB1-205ENST00000429662 SIGMAR1Q99720 223 aa6.46□□□□□ -1.37
GABPB1-205ENST00000429662 MRPL16Q9NX20 251 aaKnown RBP6.46□□□□□ -1.37
GABPB1-205ENST00000429662 ZNF256Q9Y2P7 627 aaPredicted RBP6.46□□□□□ -1.37
GABPB1-205ENST00000429662 TRAV12-3A0A0B4J271 114 aa6.45□□□□□ -1.38
GABPB1-205ENST00000429662 A0A0J9YY99 117 aa6.45□□□□□ -1.38
GABPB1-205ENST00000429662 H3BMG7 143 aa6.45□□□□□ -1.38
GABPB1-205ENST00000429662 TSHBP01222 138 aa6.45□□□□□ -1.38
GABPB1-205ENST00000429662 ELANEP08246 267 aa6.45□□□□□ -1.38
GABPB1-205ENST00000429662 PIK3CD-AS1Q5SR53 167 aa6.45□□□□□ -1.38
GABPB1-205ENST00000429662 MORN3Q6PF18 240 aaPredicted RBP6.45□□□□□ -1.38
GABPB1-205ENST00000429662 SLC25A29Q8N8R3 303 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms