RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 FAM231AP0DMU4 169 aa11.42□□□□□ -0.58
SCAP-206ENST00000428413 FAM231CP0DMU5 169 aa11.42□□□□□ -0.58
SCAP-206ENST00000428413 SLURP1P55000 103 aa11.42□□□□□ -0.58
SCAP-206ENST00000428413 XGP55808 180 aa11.42□□□□□ -0.58
SCAP-206ENST00000428413 HOXA3O43365 443 aaPredicted RBP11.42□□□□□ -0.58
SCAP-206ENST00000428413 LGALS3P17931 250 aaKnown RBP11.42□□□□□ -0.58
SCAP-206ENST00000428413 PRADC1Q9BSG0 188 aa11.42□□□□□ -0.58
SCAP-206ENST00000428413 HERVK_113P61574 105 aa11.42□□□□□ -0.58
SCAP-206ENST00000428413 CEMP1Q6PRD7 247 aaPredicted RBP11.42□□□□□ -0.58
SCAP-206ENST00000428413 C3orf56Q8N813 242 aa11.42□□□□□ -0.58
SCAP-206ENST00000428413 IGHV7-4-1A0A0J9YVY3 117 aa11.4□□□□□ -0.58
SCAP-206ENST00000428413 Q8N6K4 173 aa11.4□□□□□ -0.58
SCAP-206ENST00000428413 GATD1Q8NB37 220 aa11.4□□□□□ -0.58
SCAP-206ENST00000428413 H7C1H1 209 aa11.4□□□□□ -0.58
SCAP-206ENST00000428413 ORMDL2Q53FV1 153 aa11.4□□□□□ -0.58
SCAP-206ENST00000428413 C18orf65Q6ZTR6 163 aa11.4□□□□□ -0.58
SCAP-206ENST00000428413 FAM223BA6NKX1 122 aa11.39□□□□□ -0.59
SCAP-206ENST00000428413 FAM223AQ8IWN6 122 aa11.39□□□□□ -0.59
SCAP-206ENST00000428413 NDUFA4O00483 81 aa11.39□□□□□ -0.59
SCAP-206ENST00000428413 FGF6P10767 208 aa11.39□□□□□ -0.59
SCAP-206ENST00000428413 PTH2Q96A98 100 aa11.39□□□□□ -0.59
SCAP-206ENST00000428413 GCN1Q92616 2671 aaKnown RBP11.39□□□□□ -0.59
SCAP-206ENST00000428413 LINC01549A6NIU2 74 aa11.39□□□□□ -0.59
SCAP-206ENST00000428413 LINC01559Q495D7 138 aa11.39□□□□□ -0.59
SCAP-206ENST00000428413 C10orf105Q8TEF2 133 aa11.39□□□□□ -0.59
SCAP-206ENST00000428413 TNFRSF18Q9Y5U5 241 aa11.39□□□□□ -0.59
SCAP-206ENST00000428413 ZNF493Q6ZR52 646 aa11.38□□□□□ -0.59
SCAP-206ENST00000428413 VCX2Q9H322 139 aa11.38□□□□□ -0.59
SCAP-206ENST00000428413 PROK1P58294 105 aa11.38□□□□□ -0.59
SCAP-206ENST00000428413 C12orf74Q32Q52 190 aa11.38□□□□□ -0.59
SCAP-206ENST00000428413 MUC4Q99102 2169 aa11.38□□□□□ -0.59
SCAP-206ENST00000428413 TMEM262E9PQX1 116 aa11.37□□□□□ -0.59
SCAP-206ENST00000428413 CEND1Q8N111 149 aa11.37□□□□□ -0.59
SCAP-206ENST00000428413 USMG5Q96IX5 58 aa11.37□□□□□ -0.59
SCAP-206ENST00000428413 ATRQ13535 2644 aa11.37□□□□□ -0.59
SCAP-206ENST00000428413 MEIG1Q5JSS6 88 aa11.37□□□□□ -0.59
SCAP-206ENST00000428413 Q8N1Y9 231 aa11.37□□□□□ -0.59
SCAP-206ENST00000428413 DLX4Q92988 240 aaPredicted RBP11.37□□□□□ -0.59
SCAP-206ENST00000428413 TEP1Q99973 2627 aaKnown RBP11.36□□□□□ -0.59
SCAP-206ENST00000428413 IGHV4OR15-8A0A075B7B6 117 aa11.36□□□□□ -0.59
SCAP-206ENST00000428413 A0A087WW49 117 aa11.36□□□□□ -0.59
SCAP-206ENST00000428413 CCDC179H3BU77 68 aa11.36□□□□□ -0.59
SCAP-206ENST00000428413 E9PLD3 99 aa11.36□□□□□ -0.59
SCAP-206ENST00000428413 HOXD3P31249 432 aaPredicted RBP11.36□□□□□ -0.59
SCAP-206ENST00000428413 SRSF2Q01130 221 aaKnown RBP11.36□□□□□ -0.59
SCAP-206ENST00000428413 PPDPFLQ8WWR9 84 aa11.36□□□□□ -0.59
SCAP-206ENST00000428413 F8VRH5 84 aa11.36□□□□□ -0.59
SCAP-206ENST00000428413 CD28P10747 220 aa11.36□□□□□ -0.59
SCAP-206ENST00000428413 RPL35AP18077 110 aaKnown RBP11.36□□□□□ -0.59
SCAP-206ENST00000428413 ZFAND2AQ8N6M9 145 aa11.35□□□□□ -0.59
SCAP-206ENST00000428413 RASL10AQ92737 203 aa11.35□□□□□ -0.59
SCAP-206ENST00000428413 IFITM1P13164 125 aa11.35□□□□□ -0.59
SCAP-206ENST00000428413 Q96MF0 132 aa11.35□□□□□ -0.59
SCAP-206ENST00000428413 LYRM7Q5U5X0 104 aa11.35□□□□□ -0.59
SCAP-206ENST00000428413 SUMO4Q6EEV6 95 aa11.35□□□□□ -0.59
SCAP-206ENST00000428413 TMEM190Q8WZ59 177 aa11.35□□□□□ -0.59
SCAP-206ENST00000428413 TOMM7Q9P0U1 55 aa11.35□□□□□ -0.59
SCAP-206ENST00000428413 M0QXV9 152 aa11.34□□□□□ -0.59
SCAP-206ENST00000428413 KRTAP10-9P60411 292 aa11.34□□□□□ -0.59
SCAP-206ENST00000428413 EBI3Q14213 229 aa11.34□□□□□ -0.59
SCAP-206ENST00000428413 A0A087WX48 190 aa11.34□□□□□ -0.59
SCAP-206ENST00000428413 A8MWV9 139 aa11.34□□□□□ -0.59
SCAP-206ENST00000428413 RRN3P1Q2M238 152 aa11.34□□□□□ -0.59
SCAP-206ENST00000428413 NSUN5P1Q3KNT7 163 aa11.34□□□□□ -0.59
SCAP-206ENST00000428413 C9orf47Q6ZRZ4 202 aa11.33□□□□□ -0.6
SCAP-206ENST00000428413 PIFOQ8TCI5 191 aa11.33□□□□□ -0.6
SCAP-206ENST00000428413 CDIP1Q9H305 208 aa11.33□□□□□ -0.6
SCAP-206ENST00000428413 BSNQ9UPA5 3926 aa11.33□□□□□ -0.6
SCAP-206ENST00000428413 TRGV1A0A0A0MS02 117 aa11.33□□□□□ -0.6
SCAP-206ENST00000428413 TM2D2Q9BX73 214 aa11.33□□□□□ -0.6
SCAP-206ENST00000428413 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.32□□□□□ -0.6
SCAP-206ENST00000428413 IGKV2-29A2NJV5 120 aaPredicted RBP11.32□□□□□ -0.6
SCAP-206ENST00000428413 UBR5O95071 2799 aaPredicted RBP11.32□□□□□ -0.6
SCAP-206ENST00000428413 TRAV13-1A0A0B4J241 112 aa11.32□□□□□ -0.6
SCAP-206ENST00000428413 VCYO14598 125 aa11.32□□□□□ -0.6
SCAP-206ENST00000428413 IGHG2P01859 326 aa11.32□□□□□ -0.6
SCAP-206ENST00000428413 PLNP26678 52 aa11.32□□□□□ -0.6
SCAP-206ENST00000428413 PLEKHB2Q96CS7 222 aa11.32□□□□□ -0.6
SCAP-206ENST00000428413 A0A0J9YXV3 536 aa11.32□□□□□ -0.6
SCAP-206ENST00000428413 C11orf86A6NJI1 115 aa11.32□□□□□ -0.6
SCAP-206ENST00000428413 DAND5Q8N907 189 aa11.32□□□□□ -0.6
SCAP-206ENST00000428413 NDUFV3P56181 108 aaKnown RBP11.31□□□□□ -0.6
SCAP-206ENST00000428413 LINC01356Q8N9X3 169 aa11.31□□□□□ -0.6
SCAP-206ENST00000428413 ITPR2Q14571 2701 aa11.31□□□□□ -0.6
SCAP-206ENST00000428413 MXRA5Q9NR99 2828 aa11.31□□□□□ -0.6
SCAP-206ENST00000428413 C11orf68Q9H3H3 251 aaKnown RBP11.31□□□□□ -0.6
SCAP-206ENST00000428413 MYMXA0A1B0GTQ4 84 aa11.31□□□□□ -0.6
SCAP-206ENST00000428413 IGHV1OR15-1A0A075B7D0 117 aa11.3□□□□□ -0.6
SCAP-206ENST00000428413 BAALCQ8WXS3 180 aa11.3□□□□□ -0.6
SCAP-206ENST00000428413 A8MZ25 164 aa11.3□□□□□ -0.6
SCAP-206ENST00000428413 NRACQ8N912 160 aa11.3□□□□□ -0.6
SCAP-206ENST00000428413 NIPBLQ6KC79 2804 aaeCLIP11.29□□□□□ -0.6
SCAP-206ENST00000428413 RNASE3P12724 160 aaKnown RBP11.29□□□□□ -0.6
SCAP-206ENST00000428413 ZFP2Q6ZN57 461 aa11.29□□□□□ -0.6
SCAP-206ENST00000428413 TRBV6-1A0A0K0K1D8 114 aa11.28□□□□□ -0.6
SCAP-206ENST00000428413 PPDPFQ9H3Y8 114 aa11.28□□□□□ -0.6
SCAP-206ENST00000428413 HHLA3Q9XRX5 114 aa11.28□□□□□ -0.6
SCAP-206ENST00000428413 TRGV2A0A075B6R0 118 aa11.28□□□□□ -0.6
SCAP-206ENST00000428413 RBAKDNA6NC62 111 aa11.28□□□□□ -0.6
SCAP-206ENST00000428413 A6NDX4 124 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms