RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 APOC4P55056 127 aa10.91□□□□□ -0.66
ACTB-204ENST00000425660 OXLD1Q5BKU9 147 aa10.91□□□□□ -0.66
ACTB-204ENST00000425660 Q6ZTI0 123 aa10.91□□□□□ -0.66
ACTB-204ENST00000425660 ZNF664Q8N3J9 261 aa10.9□□□□□ -0.66
ACTB-204ENST00000425660 NOP10Q9NPE3 64 aaKnown RBP10.9□□□□□ -0.66
ACTB-204ENST00000425660 PKD1L1Q8TDX9 2849 aa10.9□□□□□ -0.66
ACTB-204ENST00000425660 IGHV3-73A0A0B4J1V6 119 aa10.89□□□□□ -0.67
ACTB-204ENST00000425660 SMIM9A6NGZ8 99 aa10.89□□□□□ -0.67
ACTB-204ENST00000425660 LINC01545Q5VT33 79 aa10.89□□□□□ -0.67
ACTB-204ENST00000425660 IFI27L1Q96BM0 104 aa10.89□□□□□ -0.67
ACTB-204ENST00000425660 X6R8D5 127 aa10.89□□□□□ -0.67
ACTB-204ENST00000425660 NACAE9PAV3 2078 aa10.89□□□□□ -0.67
ACTB-204ENST00000425660 TRAV4A0A0B4J268 109 aa10.88□□□□□ -0.67
ACTB-204ENST00000425660 IGHV4-30-4P0DP06 118 aa10.88□□□□□ -0.67
ACTB-204ENST00000425660 Q6ZSN1 163 aa10.88□□□□□ -0.67
ACTB-204ENST00000425660 KIR2DL4Q99706 377 aa10.88□□□□□ -0.67
ACTB-204ENST00000425660 ANK2Q01484 3957 aa10.88□□□□□ -0.67
ACTB-204ENST00000425660 CMYA5Q8N3K9 4069 aa10.88□□□□□ -0.67
ACTB-204ENST00000425660 C20orf202A1L168 122 aa10.88□□□□□ -0.67
ACTB-204ENST00000425660 PCP4L1A6NKN8 68 aa10.88□□□□□ -0.67
ACTB-204ENST00000425660 NUDT3O95989 172 aa10.88□□□□□ -0.67
ACTB-204ENST00000425660 PKIAP61925 76 aa10.88□□□□□ -0.67
ACTB-204ENST00000425660 OR4C5Q8NGB2 326 aa10.88□□□□□ -0.67
ACTB-204ENST00000425660 KRTAP10-11P60412 298 aa10.87□□□□□ -0.67
ACTB-204ENST00000425660 NEGR1Q7Z3B1 354 aa10.87□□□□□ -0.67
ACTB-204ENST00000425660 TOMM6Q96B49 74 aa10.87□□□□□ -0.67
ACTB-204ENST00000425660 ZMAT5Q9UDW3 170 aaKnown RBP10.87□□□□□ -0.67
ACTB-204ENST00000425660 CIDEAO60543 219 aa10.86□□□□□ -0.67
ACTB-204ENST00000425660 ATP5LO75964 103 aa10.86□□□□□ -0.67
ACTB-204ENST00000425660 G0S2P27469 103 aa10.86□□□□□ -0.67
ACTB-204ENST00000425660 RIPPLY3P57055 190 aa10.86□□□□□ -0.67
ACTB-204ENST00000425660 ZNF479Q96JC4 524 aa10.86□□□□□ -0.67
ACTB-204ENST00000425660 VAMP8Q9BV40 100 aa10.86□□□□□ -0.67
ACTB-204ENST00000425660 LINC01549A6NIU2 74 aa10.86□□□□□ -0.67
ACTB-204ENST00000425660 A8MZ25 164 aa10.86□□□□□ -0.67
ACTB-204ENST00000425660 P0DMU3 169 aa10.86□□□□□ -0.67
ACTB-204ENST00000425660 FAM231AP0DMU4 169 aa10.86□□□□□ -0.67
ACTB-204ENST00000425660 FAM231CP0DMU5 169 aa10.86□□□□□ -0.67
ACTB-204ENST00000425660 DNAJC30Q96LL9 226 aa10.86□□□□□ -0.67
ACTB-204ENST00000425660 C18orf15Q96N68 181 aa10.86□□□□□ -0.67
ACTB-204ENST00000425660 TSTD3H0UI37 97 aa10.85□□□□□ -0.67
ACTB-204ENST00000425660 I3L3M4 83 aa10.85□□□□□ -0.67
ACTB-204ENST00000425660 LGALS9CQ6DKI2 356 aa10.85□□□□□ -0.67
ACTB-204ENST00000425660 C2orf66Q6UXQ4 117 aa10.85□□□□□ -0.67
ACTB-204ENST00000425660 LINC00612Q8N6U2 182 aa10.85□□□□□ -0.67
ACTB-204ENST00000425660 NEXN-AS1Q8NBZ9 246 aa10.85□□□□□ -0.67
ACTB-204ENST00000425660 Q9UF83 564 aa10.84□□□□□ -0.67
ACTB-204ENST00000425660 TSHBP01222 138 aa10.84□□□□□ -0.67
ACTB-204ENST00000425660 RHOHQ15669 191 aa10.84□□□□□ -0.67
ACTB-204ENST00000425660 DEFB135Q30KP9 77 aa10.84□□□□□ -0.67
ACTB-204ENST00000425660 PAM16Q9Y3D7 125 aa10.84□□□□□ -0.67
ACTB-204ENST00000425660 TNFRSF18Q9Y5U5 241 aa10.84□□□□□ -0.67
ACTB-204ENST00000425660 TRGV2A0A075B6R0 118 aa10.83□□□□□ -0.68
ACTB-204ENST00000425660 TRAV9-2A0A087WT02 112 aa10.83□□□□□ -0.68
ACTB-204ENST00000425660 TRBV10-1A0A0K0K1A3 114 aa10.83□□□□□ -0.68
ACTB-204ENST00000425660 GAGE12BA1L429 117 aa10.83□□□□□ -0.68
ACTB-204ENST00000425660 H0Y8G0 127 aa10.83□□□□□ -0.68
ACTB-204ENST00000425660 GAGE7O76087 117 aa10.83□□□□□ -0.68
ACTB-204ENST00000425660 GAGE12FP0CL80 117 aa10.83□□□□□ -0.68
ACTB-204ENST00000425660 GAGE12GP0CL81 117 aa10.83□□□□□ -0.68
ACTB-204ENST00000425660 GAGE12IP0CL82 117 aa10.83□□□□□ -0.68
ACTB-204ENST00000425660 ATOH7Q8N100 152 aa10.83□□□□□ -0.68
ACTB-204ENST00000425660 NBEAL2Q6ZNJ1 2754 aa10.83□□□□□ -0.68
ACTB-204ENST00000425660 ERASQ7Z444 233 aa10.82□□□□□ -0.68
ACTB-204ENST00000425660 PRO1933Q9H354 126 aa10.82□□□□□ -0.68
ACTB-204ENST00000425660 CYSLTR1Q9Y271 337 aa10.82□□□□□ -0.68
ACTB-204ENST00000425660 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.81□□□□□ -0.68
ACTB-204ENST00000425660 ZMAT4Q9H898 229 aa10.81□□□□□ -0.68
ACTB-204ENST00000425660 K7EQD1 137 aa10.81□□□□□ -0.68
ACTB-204ENST00000425660 SLC25A29Q8N8R3 303 aa10.81□□□□□ -0.68
ACTB-204ENST00000425660 OR11H2Q8NH07 326 aa10.81□□□□□ -0.68
ACTB-204ENST00000425660 RNF183Q96D59 192 aa10.81□□□□□ -0.68
ACTB-204ENST00000425660 SCGB3A1Q96QR1 104 aa10.81□□□□□ -0.68
ACTB-204ENST00000425660 TRBV6-4A0A1B0GX49 114 aa10.8□□□□□ -0.68
ACTB-204ENST00000425660 IGIPA6NJ69 53 aa10.8□□□□□ -0.68
ACTB-204ENST00000425660 PRSS1P07477 247 aa10.8□□□□□ -0.68
ACTB-204ENST00000425660 EMP1P54849 157 aa10.8□□□□□ -0.68
ACTB-204ENST00000425660 ODF1Q14990 250 aa10.8□□□□□ -0.68
ACTB-204ENST00000425660 MAJINQ3KP22 176 aa10.8□□□□□ -0.68
ACTB-204ENST00000425660 SPATA45Q537H7 98 aa10.8□□□□□ -0.68
ACTB-204ENST00000425660 SAMD5Q5TGI4 173 aa10.8□□□□□ -0.68
ACTB-204ENST00000425660 PMCHL2Q9BQD1 86 aa10.8□□□□□ -0.68
ACTB-204ENST00000425660 TP53TG1Q9Y2A0 90 aa10.8□□□□□ -0.68
ACTB-204ENST00000425660 DNAH3Q8TD57 4116 aa10.8□□□□□ -0.68
ACTB-204ENST00000425660 TRBV7-3A0A075B6L6 115 aa10.79□□□□□ -0.68
ACTB-204ENST00000425660 LYRM9A8MSI8 78 aa10.79□□□□□ -0.68
ACTB-204ENST00000425660 G3V4G9 280 aa10.79□□□□□ -0.68
ACTB-204ENST00000425660 MIFP14174 115 aa10.79□□□□□ -0.68
ACTB-204ENST00000425660 C20orf203Q8NBC4 194 aa10.79□□□□□ -0.68
ACTB-204ENST00000425660 DNHD1Q96M86 4753 aa10.79□□□□□ -0.68
ACTB-204ENST00000425660 TRAV12-1A0A0B4J245 112 aa10.79□□□□□ -0.68
ACTB-204ENST00000425660 Q8NAQ8 132 aa10.79□□□□□ -0.68
ACTB-204ENST00000425660 DEFB104AQ8WTQ1 72 aa10.79□□□□□ -0.68
ACTB-204ENST00000425660 TIMM17AQ99595 171 aa10.79□□□□□ -0.68
ACTB-204ENST00000425660 DDTP30046 118 aa10.78□□□□□ -0.68
ACTB-204ENST00000425660 RPL39P62891 51 aaKnown RBP10.78□□□□□ -0.68
ACTB-204ENST00000425660 Q6ZN92 141 aa10.78□□□□□ -0.68
ACTB-204ENST00000425660 IGHV4-28A0A0C4DH34 117 aa10.77□□□□□ -0.68
ACTB-204ENST00000425660 RPL36AP83881 106 aaKnown RBP10.77□□□□□ -0.68
ACTB-204ENST00000425660 FHL2Q14192 279 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms