RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 CNFNQ9BYD5 112 aa13.59□□□□□ -0.23
GTF3A-202ENST00000419181 DAZ3Q9NR90 486 aaKnown RBP13.59□□□□□ -0.23
GTF3A-202ENST00000419181 PGPEP1Q9NXJ5 209 aa13.59□□□□□ -0.23
GTF3A-202ENST00000419181 PSCAO43653 123 aa13.58□□□□□ -0.24
GTF3A-202ENST00000419181 NTF3P20783 257 aa13.58□□□□□ -0.24
GTF3A-202ENST00000419181 TRBV6-8A0A0A6YYG3 113 aa13.57□□□□□ -0.24
GTF3A-202ENST00000419181 M0QY20 66 aa13.57□□□□□ -0.24
GTF3A-202ENST00000419181 MGPP08493 103 aa13.57□□□□□ -0.24
GTF3A-202ENST00000419181 TRGC1P0CF51 173 aa13.57□□□□□ -0.24
GTF3A-202ENST00000419181 CDPF1Q6NVV7 123 aa13.57□□□□□ -0.24
GTF3A-202ENST00000419181 FAM231DQ6ZW35 169 aa13.57□□□□□ -0.24
GTF3A-202ENST00000419181 URGCP-MRPS24S4R325 110 aa13.57□□□□□ -0.24
GTF3A-202ENST00000419181 PCLOQ9Y6V0 5065 aa13.57□□□□□ -0.24
GTF3A-202ENST00000419181 TRAV8-3A0A0A6YYJ7 113 aa13.56□□□□□ -0.24
GTF3A-202ENST00000419181 LRCOL1A6NCL2 159 aa13.56□□□□□ -0.24
GTF3A-202ENST00000419181 SRP19P09132 144 aaKnown RBP13.56□□□□□ -0.24
GTF3A-202ENST00000419181 FUSP35637 526 aaKnown RBP eCLIP13.56□□□□□ -0.24
GTF3A-202ENST00000419181 GTSF1Q8WW33 167 aa13.56□□□□□ -0.24
GTF3A-202ENST00000419181 SMIM7Q9BQ49 75 aa13.56□□□□□ -0.24
GTF3A-202ENST00000419181 CHCHD7Q9BUK0 85 aa13.56□□□□□ -0.24
GTF3A-202ENST00000419181 HSPG2P98160 4391 aa13.55□□□□□ -0.24
GTF3A-202ENST00000419181 H7C1H1 209 aa13.55□□□□□ -0.24
GTF3A-202ENST00000419181 SUMO4Q6EEV6 95 aa13.55□□□□□ -0.24
GTF3A-202ENST00000419181 TEX261Q6UWH6 196 aa13.55□□□□□ -0.24
GTF3A-202ENST00000419181 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.55□□□□□ -0.24
GTF3A-202ENST00000419181 DPH3P1Q9H4G8 78 aa13.55□□□□□ -0.24
GTF3A-202ENST00000419181 GATCO43716 136 aaKnown RBP13.54□□□□□ -0.24
GTF3A-202ENST00000419181 LINC01551Q86U37 167 aa13.54□□□□□ -0.24
GTF3A-202ENST00000419181 TM2D2Q9BX73 214 aa13.54□□□□□ -0.24
GTF3A-202ENST00000419181 APOBP04114 4563 aaKnown RBP13.53□□□□□ -0.24
GTF3A-202ENST00000419181 A0A087WX48 190 aa13.53□□□□□ -0.24
GTF3A-202ENST00000419181 TWIST1Q15672 202 aa13.53□□□□□ -0.24
GTF3A-202ENST00000419181 DNAJC30Q96LL9 226 aa13.53□□□□□ -0.24
GTF3A-202ENST00000419181 ZNF727A8MUV8 499 aa13.52□□□□□ -0.25
GTF3A-202ENST00000419181 TMEM97Q5BJF2 176 aa13.52□□□□□ -0.25
GTF3A-202ENST00000419181 CT83Q5H943 113 aa13.52□□□□□ -0.25
GTF3A-202ENST00000419181 NTM-AS1Q6ZSK4 140 aa13.52□□□□□ -0.25
GTF3A-202ENST00000419181 KLK12Q9UKR0 248 aa13.52□□□□□ -0.25
GTF3A-202ENST00000419181 A8MWL6 223 aa13.51□□□□□ -0.25
GTF3A-202ENST00000419181 KCNIP4Q6PIL6 250 aa13.51□□□□□ -0.25
GTF3A-202ENST00000419181 RASL11AQ6T310 242 aa13.51□□□□□ -0.25
GTF3A-202ENST00000419181 ELOBQ15370 118 aa13.5□□□□□ -0.25
GTF3A-202ENST00000419181 TMEM262E9PQX1 116 aa13.49□□□□□ -0.25
GTF3A-202ENST00000419181 FOXA3P55318 350 aaPredicted RBP13.49□□□□□ -0.25
GTF3A-202ENST00000419181 MPV17L2Q567V2 206 aa13.49□□□□□ -0.25
GTF3A-202ENST00000419181 Q8N814 137 aa13.49□□□□□ -0.25
GTF3A-202ENST00000419181 MAPKAPK5-AS1Q8N8E1 139 aa13.49□□□□□ -0.25
GTF3A-202ENST00000419181 CHCHD5Q9BSY4 110 aa13.49□□□□□ -0.25
GTF3A-202ENST00000419181 UBE2WQ96B02 151 aa13.48□□□□□ -0.25
GTF3A-202ENST00000419181 RMI2Q96E14 147 aa13.48□□□□□ -0.25
GTF3A-202ENST00000419181 PGLYRP4Q96LB8 373 aa13.48□□□□□ -0.25
GTF3A-202ENST00000419181 NIT2Q9NQR4 276 aa13.48□□□□□ -0.25
GTF3A-202ENST00000419181 OSTCQ9NRP0 149 aa13.48□□□□□ -0.25
GTF3A-202ENST00000419181 COX11Q9Y6N1 276 aa13.48□□□□□ -0.25
GTF3A-202ENST00000419181 TRBV25-1A0A075B6N4 114 aa13.47□□□□□ -0.25
GTF3A-202ENST00000419181 C9JQL5 133 aa13.47□□□□□ -0.25
GTF3A-202ENST00000419181 PKIAP61925 76 aa13.47□□□□□ -0.25
GTF3A-202ENST00000419181 WFDC2Q14508 124 aa13.47□□□□□ -0.25
GTF3A-202ENST00000419181 IQCJQ1A5X6 159 aa13.47□□□□□ -0.25
GTF3A-202ENST00000419181 ATRAIDQ6UW56 229 aa13.47□□□□□ -0.25
GTF3A-202ENST00000419181 NTN5Q8WTR8 489 aaPredicted RBP13.47□□□□□ -0.25
GTF3A-202ENST00000419181 SRSF3P84103 164 aaKnown RBP13.46□□□□□ -0.25
GTF3A-202ENST00000419181 FAM74A3Q4VXF1 159 aa13.46□□□□□ -0.25
GTF3A-202ENST00000419181 GATD1Q8NB37 220 aa13.46□□□□□ -0.25
GTF3A-202ENST00000419181 TSKUQ8WUA8 353 aa13.46□□□□□ -0.25
GTF3A-202ENST00000419181 KRTAP4-5Q9BYR2 181 aa13.46□□□□□ -0.25
GTF3A-202ENST00000419181 GFRA4Q9GZZ7 299 aa13.46□□□□□ -0.25
GTF3A-202ENST00000419181 IGHV1-24A0A0C4DH33 117 aa13.45□□□□□ -0.26
GTF3A-202ENST00000419181 KRTAP10-1P60331 282 aa13.45□□□□□ -0.26
GTF3A-202ENST00000419181 TMEM241Q24JQ0 296 aa13.45□□□□□ -0.26
GTF3A-202ENST00000419181 SMIM15Q7Z3B0 74 aa13.45□□□□□ -0.26
GTF3A-202ENST00000419181 C15orf54Q8N8G6 183 aa13.45□□□□□ -0.26
GTF3A-202ENST00000419181 Q8N976 141 aa13.45□□□□□ -0.26
GTF3A-202ENST00000419181 FRZBQ92765 325 aa13.45□□□□□ -0.26
GTF3A-202ENST00000419181 IGKV2D-24A0A075B6R9 120 aa13.44□□□□□ -0.26
GTF3A-202ENST00000419181 IGLV5-52A0A0A0MRZ9 124 aa13.44□□□□□ -0.26
GTF3A-202ENST00000419181 TRAV26-2A0A0B4J265 109 aa13.44□□□□□ -0.26
GTF3A-202ENST00000419181 FAM231BA6NCW3 169 aa13.44□□□□□ -0.26
GTF3A-202ENST00000419181 HIGD1CA8MV81 97 aa13.44□□□□□ -0.26
GTF3A-202ENST00000419181 GCSHP23434 173 aa13.44□□□□□ -0.26
GTF3A-202ENST00000419181 Q0VG73 95 aa13.44□□□□□ -0.26
GTF3A-202ENST00000419181 PEA15Q15121 130 aa13.44□□□□□ -0.26
GTF3A-202ENST00000419181 ENHOQ6UWT2 76 aa13.44□□□□□ -0.26
GTF3A-202ENST00000419181 ISOC2Q96AB3 205 aa13.44□□□□□ -0.26
GTF3A-202ENST00000419181 SMDT1Q9H4I9 107 aa13.44□□□□□ -0.26
GTF3A-202ENST00000419181 ANGP03950 147 aaKnown RBP13.43□□□□□ -0.26
GTF3A-202ENST00000419181 RPL23P62829 140 aaKnown RBP13.43□□□□□ -0.26
GTF3A-202ENST00000419181 V9GYV3 84 aa13.43□□□□□ -0.26
GTF3A-202ENST00000419181 A0A1B0GUT8 65 aa13.42□□□□□ -0.26
GTF3A-202ENST00000419181 LECT2O14960 151 aa13.42□□□□□ -0.26
GTF3A-202ENST00000419181 RBX1P62877 108 aa13.42□□□□□ -0.26
GTF3A-202ENST00000419181 GAGE6Q13070 117 aa13.42□□□□□ -0.26
GTF3A-202ENST00000419181 BAALCQ8WXS3 180 aa13.42□□□□□ -0.26
GTF3A-202ENST00000419181 BORCS7Q96B45 105 aa13.42□□□□□ -0.26
GTF3A-202ENST00000419181 CRPP02741 224 aa13.41□□□□□ -0.26
GTF3A-202ENST00000419181 NAT8Q9UHE5 227 aa13.41□□□□□ -0.26
GTF3A-202ENST00000419181 ABCA13Q86UQ4 5058 aa13.4□□□□□ -0.26
GTF3A-202ENST00000419181 ADIRFQ15847 76 aa13.4□□□□□ -0.26
GTF3A-202ENST00000419181 Q8N1X5 172 aa13.4□□□□□ -0.26
GTF3A-202ENST00000419181 RPL39LQ96EH5 51 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms