RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 MRPL16Q9NX20 251 aaKnown RBP12.13□□□□□ -0.47
SSBP3-205ENST00000417664 UQCR10Q9UDW1 63 aa12.13□□□□□ -0.47
SSBP3-205ENST00000417664 IGHV3-53P01767 116 aa12.12□□□□□ -0.47
SSBP3-205ENST00000417664 IGLC3P0DOY3 106 aa12.12□□□□□ -0.47
SSBP3-205ENST00000417664 RHOHQ15669 191 aa12.12□□□□□ -0.47
SSBP3-205ENST00000417664 KRTAP24-1Q3LI83 254 aa12.12□□□□□ -0.47
SSBP3-205ENST00000417664 C2orf66Q6UXQ4 117 aa12.12□□□□□ -0.47
SSBP3-205ENST00000417664 CYSLTR1Q9Y271 337 aa12.12□□□□□ -0.47
SSBP3-205ENST00000417664 NIPBLQ6KC79 2804 aaeCLIP12.11□□□□□ -0.47
SSBP3-205ENST00000417664 TEP1Q99973 2627 aaKnown RBP12.11□□□□□ -0.47
SSBP3-205ENST00000417664 I3L3M4 83 aa12.11□□□□□ -0.47
SSBP3-205ENST00000417664 CIDEAO60543 219 aa12.11□□□□□ -0.47
SSBP3-205ENST00000417664 RIPPLY3P57055 190 aa12.11□□□□□ -0.47
SSBP3-205ENST00000417664 ERASQ7Z444 233 aa12.11□□□□□ -0.47
SSBP3-205ENST00000417664 SPATA3Q8NHX4 192 aa12.11□□□□□ -0.47
SSBP3-205ENST00000417664 DNAJC30Q96LL9 226 aa12.11□□□□□ -0.47
SSBP3-205ENST00000417664 SCGB3A1Q96QR1 104 aa12.11□□□□□ -0.47
SSBP3-205ENST00000417664 TRGV1A0A0A0MS02 117 aa12.1□□□□□ -0.47
SSBP3-205ENST00000417664 MAJINQ3KP22 176 aa12.1□□□□□ -0.47
SSBP3-205ENST00000417664 Q6ZN92 141 aa12.1□□□□□ -0.47
SSBP3-205ENST00000417664 BAHCC1Q9P281 2608 aa12.1□□□□□ -0.47
SSBP3-205ENST00000417664 ATRQ13535 2644 aa12.1□□□□□ -0.47
SSBP3-205ENST00000417664 TRAV12-1A0A0B4J245 112 aa12.1□□□□□ -0.47
SSBP3-205ENST00000417664 ODF1Q14990 250 aa12.1□□□□□ -0.47
SSBP3-205ENST00000417664 OR4C5Q8NGB2 326 aa12.1□□□□□ -0.47
SSBP3-205ENST00000417664 KIR2DL5BQ8NHK3 375 aa12.1□□□□□ -0.47
SSBP3-205ENST00000417664 PMCHL2Q9BQD1 86 aa12.1□□□□□ -0.47
SSBP3-205ENST00000417664 OVOL2Q9BRP0 275 aa12.1□□□□□ -0.47
SSBP3-205ENST00000417664 TNFRSF18Q9Y5U5 241 aa12.1□□□□□ -0.47
SSBP3-205ENST00000417664 TRAV4A0A0B4J268 109 aa12.09□□□□□ -0.47
SSBP3-205ENST00000417664 MRPL52Q86TS9 123 aaKnown RBP12.09□□□□□ -0.47
SSBP3-205ENST00000417664 C14orf144Q96I85 54 aa12.09□□□□□ -0.47
SSBP3-205ENST00000417664 ZMAT4Q9H898 229 aa12.09□□□□□ -0.47
SSBP3-205ENST00000417664 IGHV3-73A0A0B4J1V6 119 aa12.08□□□□□ -0.48
SSBP3-205ENST00000417664 NEGR1Q7Z3B1 354 aa12.08□□□□□ -0.48
SSBP3-205ENST00000417664 A0A087WX48 190 aa12.07□□□□□ -0.48
SSBP3-205ENST00000417664 hDV102S1A0JD36 115 aa12.07□□□□□ -0.48
SSBP3-205ENST00000417664 PLAC8L1A1L4L8 177 aa12.07□□□□□ -0.48
SSBP3-205ENST00000417664 SMIM9A6NGZ8 99 aa12.07□□□□□ -0.48
SSBP3-205ENST00000417664 SHISA2Q6UWI4 295 aa12.07□□□□□ -0.48
SSBP3-205ENST00000417664 TMEM141Q96I45 108 aa12.07□□□□□ -0.48
SSBP3-205ENST00000417664 NACAE9PAV3 2078 aa12.07□□□□□ -0.48
SSBP3-205ENST00000417664 TIMM17AQ99595 171 aa12.06□□□□□ -0.48
SSBP3-205ENST00000417664 NOP10Q9NPE3 64 aaKnown RBP12.06□□□□□ -0.48
SSBP3-205ENST00000417664 TENM1Q9UKZ4 2725 aa12.06□□□□□ -0.48
SSBP3-205ENST00000417664 TRBV10-1A0A0K0K1A3 114 aa12.06□□□□□ -0.48
SSBP3-205ENST00000417664 DPM2O94777 84 aa12.06□□□□□ -0.48
SSBP3-205ENST00000417664 TSHBP01222 138 aa12.06□□□□□ -0.48
SSBP3-205ENST00000417664 APOC4P55056 127 aa12.06□□□□□ -0.48
SSBP3-205ENST00000417664 Q6ZTI0 123 aa12.06□□□□□ -0.48
SSBP3-205ENST00000417664 C3orf56Q8N813 242 aa12.06□□□□□ -0.48
SSBP3-205ENST00000417664 DKK2Q9UBU2 259 aa12.06□□□□□ -0.48
SSBP3-205ENST00000417664 TP53TG1Q9Y2A0 90 aa12.06□□□□□ -0.48
SSBP3-205ENST00000417664 NOTCH3Q9UM47 2321 aa12.06□□□□□ -0.48
SSBP3-205ENST00000417664 IGKCP01834 107 aa12.05□□□□□ -0.48
SSBP3-205ENST00000417664 LBHQ53QV2 105 aaPredicted RBP12.05□□□□□ -0.48
SSBP3-205ENST00000417664 NEXN-AS1Q8NBZ9 246 aa12.05□□□□□ -0.48
SSBP3-205ENST00000417664 IGIPA6NJ69 53 aa12.04□□□□□ -0.48
SSBP3-205ENST00000417664 PLNP26678 52 aa12.04□□□□□ -0.48
SSBP3-205ENST00000417664 Q6ZSN1 163 aa12.04□□□□□ -0.48
SSBP3-205ENST00000417664 F8VRH5 84 aa12.03□□□□□ -0.48
SSBP3-205ENST00000417664 P0DMU3 169 aa12.03□□□□□ -0.48
SSBP3-205ENST00000417664 FAM231AP0DMU4 169 aa12.03□□□□□ -0.48
SSBP3-205ENST00000417664 FAM231CP0DMU5 169 aa12.03□□□□□ -0.48
SSBP3-205ENST00000417664 SLC25A34Q6PIV7 304 aa12.03□□□□□ -0.48
SSBP3-205ENST00000417664 C20orf203Q8NBC4 194 aa12.03□□□□□ -0.48
SSBP3-205ENST00000417664 BAALCQ8WXS3 180 aa12.03□□□□□ -0.48
SSBP3-205ENST00000417664 ZNF479Q96JC4 524 aa12.03□□□□□ -0.48
SSBP3-205ENST00000417664 VWFP04275 2813 aa12.02□□□□□ -0.49
SSBP3-205ENST00000417664 HNRNPA3P51991 378 aaKnown RBP12.02□□□□□ -0.49
SSBP3-205ENST00000417664 C12orf54Q6X4T0 127 aa12.02□□□□□ -0.49
SSBP3-205ENST00000417664 MRPL35Q9NZE8 188 aaKnown RBP12.02□□□□□ -0.49
SSBP3-205ENST00000417664 ZMAT5Q9UDW3 170 aaKnown RBP12.02□□□□□ -0.49
SSBP3-205ENST00000417664 MRPS16Q9Y3D3 137 aaKnown RBP12.02□□□□□ -0.49
SSBP3-205ENST00000417664 TRGV2A0A075B6R0 118 aa12.01□□□□□ -0.49
SSBP3-205ENST00000417664 CYSRT1A8MQ03 144 aa12.01□□□□□ -0.49
SSBP3-205ENST00000417664 K7EQD1 137 aa12.01□□□□□ -0.49
SSBP3-205ENST00000417664 NPSP0C0P6 89 aa12.01□□□□□ -0.49
SSBP3-205ENST00000417664 COX8AP10176 69 aa12.01□□□□□ -0.49
SSBP3-205ENST00000417664 HHLA3Q9XRX5 114 aa12.01□□□□□ -0.49
SSBP3-205ENST00000417664 M0R143 59 aa12□□□□□ -0.49
SSBP3-205ENST00000417664 RPL39P62891 51 aaKnown RBP12□□□□□ -0.49
SSBP3-205ENST00000417664 CHTOPQ9Y3Y2 248 aaKnown RBP12□□□□□ -0.49
SSBP3-205ENST00000417664 TRBV7-3A0A075B6L6 115 aa12□□□□□ -0.49
SSBP3-205ENST00000417664 RPL36AP83881 106 aaKnown RBP12□□□□□ -0.49
SSBP3-205ENST00000417664 PMVKQ15126 192 aa12□□□□□ -0.49
SSBP3-205ENST00000417664 PAPPA-AS1Q5QFB9 102 aa12□□□□□ -0.49
SSBP3-205ENST00000417664 PRIMA1Q86XR5 153 aa12□□□□□ -0.49
SSBP3-205ENST00000417664 RPL36ALQ969Q0 106 aaKnown RBP12□□□□□ -0.49
SSBP3-205ENST00000417664 PYGO1Q9Y3Y4 419 aa12□□□□□ -0.49
SSBP3-205ENST00000417664 X6R8D5 127 aa12□□□□□ -0.49
SSBP3-205ENST00000417664 GAGE12BA1L429 117 aa11.99□□□□□ -0.49
SSBP3-205ENST00000417664 PRSS29PA6NIE9 313 aa11.99□□□□□ -0.49
SSBP3-205ENST00000417664 GAGE7O76087 117 aa11.99□□□□□ -0.49
SSBP3-205ENST00000417664 GAGE12FP0CL80 117 aa11.99□□□□□ -0.49
SSBP3-205ENST00000417664 GAGE12GP0CL81 117 aa11.99□□□□□ -0.49
SSBP3-205ENST00000417664 GAGE12IP0CL82 117 aa11.99□□□□□ -0.49
SSBP3-205ENST00000417664 COTL1Q14019 142 aa11.99□□□□□ -0.49
SSBP3-205ENST00000417664 LINC00612Q8N6U2 182 aa11.99□□□□□ -0.49
SSBP3-205ENST00000417664 STPG4Q8N801 248 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms