RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 RPL39LQ96EH5 51 aaKnown RBP12.51□□□□□ -0.41
GCFC2-202ENST00000409857 SMIM2Q9BVW6 85 aa12.51□□□□□ -0.41
GCFC2-202ENST00000409857 PKD1L1Q8TDX9 2849 aa12.51□□□□□ -0.41
GCFC2-202ENST00000409857 H3BMG7 143 aa12.5□□□□□ -0.41
GCFC2-202ENST00000409857 HLA-DRB4P13762 266 aa12.5□□□□□ -0.41
GCFC2-202ENST00000409857 U3KQE9 123 aa12.5□□□□□ -0.41
GCFC2-202ENST00000409857 HLA-DRB4X5D2U9 266 aa12.5□□□□□ -0.41
GCFC2-202ENST00000409857 ZNF479Q96JC4 524 aa12.5□□□□□ -0.41
GCFC2-202ENST00000409857 PLNP26678 52 aa12.49□□□□□ -0.41
GCFC2-202ENST00000409857 FOXI2Q6ZQN5 318 aa12.49□□□□□ -0.41
GCFC2-202ENST00000409857 C14orf178Q8N769 122 aaPredicted RBP12.49□□□□□ -0.41
GCFC2-202ENST00000409857 RASL10AQ92737 203 aa12.49□□□□□ -0.41
GCFC2-202ENST00000409857 IGLV1-51P01701 117 aa12.49□□□□□ -0.41
GCFC2-202ENST00000409857 AZU1P20160 251 aa12.49□□□□□ -0.41
GCFC2-202ENST00000409857 MRPL53Q96EL3 112 aaKnown RBP12.49□□□□□ -0.41
GCFC2-202ENST00000409857 SCGB3A1Q96QR1 104 aa12.49□□□□□ -0.41
GCFC2-202ENST00000409857 F8VRH5 84 aa12.48□□□□□ -0.41
GCFC2-202ENST00000409857 H7C1H1 209 aa12.48□□□□□ -0.41
GCFC2-202ENST00000409857 EDN2P20800 178 aa12.48□□□□□ -0.41
GCFC2-202ENST00000409857 DEFB104AQ8WTQ1 72 aa12.48□□□□□ -0.41
GCFC2-202ENST00000409857 SH2D6Q7Z4S9 175 aa12.48□□□□□ -0.41
GCFC2-202ENST00000409857 RHPN1-AS1Q9BWJ2 59 aa12.48□□□□□ -0.41
GCFC2-202ENST00000409857 TRBV7-3A0A075B6L6 115 aa12.47□□□□□ -0.41
GCFC2-202ENST00000409857 GLMPQ8WWB7 406 aa12.47□□□□□ -0.41
GCFC2-202ENST00000409857 MRAP2Q96G30 205 aa12.47□□□□□ -0.41
GCFC2-202ENST00000409857 SUMO2P61956 95 aaKnown RBP12.47□□□□□ -0.41
GCFC2-202ENST00000409857 DEFB114Q30KQ6 69 aa12.47□□□□□ -0.41
GCFC2-202ENST00000409857 ZFAND2AQ8N6M9 145 aa12.47□□□□□ -0.41
GCFC2-202ENST00000409857 DYNLRB2Q8TF09 96 aa12.47□□□□□ -0.41
GCFC2-202ENST00000409857 MGPP08493 103 aa12.46□□□□□ -0.41
GCFC2-202ENST00000409857 GTSF1LQ9H1H1 148 aa12.46□□□□□ -0.41
GCFC2-202ENST00000409857 CYSLTR1Q9Y271 337 aa12.46□□□□□ -0.41
GCFC2-202ENST00000409857 MYMXA0A1B0GTQ4 84 aa12.46□□□□□ -0.42
GCFC2-202ENST00000409857 F6UB75 175 aa12.46□□□□□ -0.42
GCFC2-202ENST00000409857 S100A4P26447 101 aaKnown RBP12.46□□□□□ -0.42
GCFC2-202ENST00000409857 TAL2Q16559 108 aa12.46□□□□□ -0.42
GCFC2-202ENST00000409857 NEXN-AS1Q8NBZ9 246 aa12.46□□□□□ -0.42
GCFC2-202ENST00000409857 TOMM6Q96B49 74 aa12.46□□□□□ -0.42
GCFC2-202ENST00000409857 SIGMAR1Q99720 223 aa12.46□□□□□ -0.42
GCFC2-202ENST00000409857 SPANXB1Q9NS25 103 aaPredicted RBP12.46□□□□□ -0.42
GCFC2-202ENST00000409857 IGKV3-7A0A075B6H7 116 aa12.45□□□□□ -0.42
GCFC2-202ENST00000409857 TRAV12-1A0A0B4J245 112 aa12.45□□□□□ -0.42
GCFC2-202ENST00000409857 TRAV25A0A0B4J276 109 aa12.45□□□□□ -0.42
GCFC2-202ENST00000409857 OR11H12B2RN74 326 aa12.45□□□□□ -0.42
GCFC2-202ENST00000409857 SMAGPQ0VAQ4 97 aa12.45□□□□□ -0.42
GCFC2-202ENST00000409857 OR11H2Q8NH07 326 aa12.45□□□□□ -0.42
GCFC2-202ENST00000409857 GNRH2O43555 120 aa12.45□□□□□ -0.42
GCFC2-202ENST00000409857 ANXA2RQ3ZCQ2 193 aa12.45□□□□□ -0.42
GCFC2-202ENST00000409857 ETDBQ3ZM63 59 aa12.45□□□□□ -0.42
GCFC2-202ENST00000409857 OXLD1Q5BKU9 147 aa12.45□□□□□ -0.42
GCFC2-202ENST00000409857 EGFEM1PQ0D2K5 195 aa12.44□□□□□ -0.42
GCFC2-202ENST00000409857 BAALCQ8WXS3 180 aa12.44□□□□□ -0.42
GCFC2-202ENST00000409857 RNASE4P34096 147 aaKnown RBP12.44□□□□□ -0.42
GCFC2-202ENST00000409857 CD300EQ496F6 205 aaPredicted RBP12.44□□□□□ -0.42
GCFC2-202ENST00000409857 ORMDL2Q53FV1 153 aa12.44□□□□□ -0.42
GCFC2-202ENST00000409857 C2orf66Q6UXQ4 117 aa12.44□□□□□ -0.42
GCFC2-202ENST00000409857 PHLDA3Q9Y5J5 127 aa12.44□□□□□ -0.42
GCFC2-202ENST00000409857 F8W1H4 67 aa12.43□□□□□ -0.42
GCFC2-202ENST00000409857 RRN3P1Q2M238 152 aa12.43□□□□□ -0.42
GCFC2-202ENST00000409857 KPRPQ5T749 579 aaPredicted RBP12.43□□□□□ -0.42
GCFC2-202ENST00000409857 DPH3P1Q9H4G8 78 aa12.43□□□□□ -0.42
GCFC2-202ENST00000409857 RPL11P62913 178 aaKnown RBP12.43□□□□□ -0.42
GCFC2-202ENST00000409857 NOTCH3Q9UM47 2321 aa12.42□□□□□ -0.42
GCFC2-202ENST00000409857 PRSS29PA6NIE9 313 aa12.42□□□□□ -0.42
GCFC2-202ENST00000409857 ASIPP42127 132 aa12.42□□□□□ -0.42
GCFC2-202ENST00000409857 OR10J6PQ8NGY7 276 aa12.42□□□□□ -0.42
GCFC2-202ENST00000409857 PRADC1Q9BSG0 188 aa12.42□□□□□ -0.42
GCFC2-202ENST00000409857 TRAV21A0A0B4J279 112 aa12.42□□□□□ -0.42
GCFC2-202ENST00000409857 LINC00477Q96M19 166 aa12.42□□□□□ -0.42
GCFC2-202ENST00000409857 MORN3Q6PF18 240 aaPredicted RBP12.41□□□□□ -0.42
GCFC2-202ENST00000409857 TMEM61Q8N0U2 210 aa12.41□□□□□ -0.42
GCFC2-202ENST00000409857 PLEKHB2Q96CS7 222 aa12.41□□□□□ -0.42
GCFC2-202ENST00000409857 MGAM2Q2M2H8 2515 aa12.41□□□□□ -0.42
GCFC2-202ENST00000409857 EMP1P54849 157 aa12.41□□□□□ -0.42
GCFC2-202ENST00000409857 SPAG8Q99932 426 aaPredicted RBP12.41□□□□□ -0.42
GCFC2-202ENST00000409857 C20orf78Q9BR46 151 aa12.41□□□□□ -0.42
GCFC2-202ENST00000409857 LENEPQ9Y5L5 61 aa12.41□□□□□ -0.42
GCFC2-202ENST00000409857 SOCS3O14543 225 aa12.4□□□□□ -0.42
GCFC2-202ENST00000409857 BEAN1Q3B7T3 259 aa12.4□□□□□ -0.42
GCFC2-202ENST00000409857 GAGE13Q4V321 117 aa12.4□□□□□ -0.42
GCFC2-202ENST00000409857 SFTA2Q6UW10 78 aa12.4□□□□□ -0.42
GCFC2-202ENST00000409857 PRO0461Q9UI25 63 aa12.4□□□□□ -0.42
GCFC2-202ENST00000409857 MUC4Q99102 2169 aa12.4□□□□□ -0.42
GCFC2-202ENST00000409857 TRAV2A0A0B4J234 112 aa12.4□□□□□ -0.42
GCFC2-202ENST00000409857 A0A1B0GWB2 263 aa12.4□□□□□ -0.42
GCFC2-202ENST00000409857 DUSP14O95147 198 aaKnown RBP12.4□□□□□ -0.42
GCFC2-202ENST00000409857 RNASE3P12724 160 aaKnown RBP12.4□□□□□ -0.42
GCFC2-202ENST00000409857 ZNF815PA8K554 130 aa12.39□□□□□ -0.43
GCFC2-202ENST00000409857 GAGE12HA6NDE8 117 aa12.39□□□□□ -0.43
GCFC2-202ENST00000409857 JPT2Q9H910 190 aa12.39□□□□□ -0.43
GCFC2-202ENST00000409857 PGPEP1Q9NXJ5 209 aa12.39□□□□□ -0.43
GCFC2-202ENST00000409857 TRAV26-1A0A087WT03 109 aa12.38□□□□□ -0.43
GCFC2-202ENST00000409857 ZNF256Q9Y2P7 627 aaPredicted RBP12.38□□□□□ -0.43
GCFC2-202ENST00000409857 CRYGDP07320 174 aa12.38□□□□□ -0.43
GCFC2-202ENST00000409857 CRYBA4P53673 196 aa12.37□□□□□ -0.43
GCFC2-202ENST00000409857 KRTAP10-11P60412 298 aa12.37□□□□□ -0.43
GCFC2-202ENST00000409857 CKS1BP61024 79 aa12.37□□□□□ -0.43
GCFC2-202ENST00000409857 CFAP161Q6P656 301 aa12.37□□□□□ -0.43
GCFC2-202ENST00000409857 SCGB1D4Q6XE38 83 aa12.37□□□□□ -0.43
GCFC2-202ENST00000409857 SORL1Q92673 2214 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms