RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 F2Z2F3 143 aa9.69□□□□□ -0.86
NIF3L1-205ENST00000409588 GNG4P50150 75 aa9.69□□□□□ -0.86
NIF3L1-205ENST00000409588 Q0VG73 95 aa9.69□□□□□ -0.86
NIF3L1-205ENST00000409588 OR10AG1Q8NH19 301 aa9.69□□□□□ -0.86
NIF3L1-205ENST00000409588 TMEM70Q9BUB7 260 aa9.69□□□□□ -0.86
NIF3L1-205ENST00000409588 CACNG7P62955 275 aa9.68□□□□□ -0.86
NIF3L1-205ENST00000409588 RPL19P84098 196 aaKnown RBP9.68□□□□□ -0.86
NIF3L1-205ENST00000409588 DAZ4Q86SG3 579 aaKnown RBP9.68□□□□□ -0.86
NIF3L1-205ENST00000409588 DAZ3Q9NR90 486 aaKnown RBP9.68□□□□□ -0.86
NIF3L1-205ENST00000409588 VAX2Q9UIW0 290 aa9.68□□□□□ -0.86
NIF3L1-205ENST00000409588 TRBV6-8A0A0A6YYG3 113 aa9.67□□□□□ -0.86
NIF3L1-205ENST00000409588 EPM2AB3EWF7 344 aa9.67□□□□□ -0.86
NIF3L1-205ENST00000409588 F5H697 171 aa9.67□□□□□ -0.86
NIF3L1-205ENST00000409588 XGP55808 180 aa9.67□□□□□ -0.86
NIF3L1-205ENST00000409588 KRTAP10-1P60331 282 aa9.67□□□□□ -0.86
NIF3L1-205ENST00000409588 ZNF56Q15929 161 aa9.67□□□□□ -0.86
NIF3L1-205ENST00000409588 CENPWQ5EE01 88 aa9.67□□□□□ -0.86
NIF3L1-205ENST00000409588 Q6ZNX1 250 aa9.67□□□□□ -0.86
NIF3L1-205ENST00000409588 AP1S3Q96PC3 154 aa9.67□□□□□ -0.86
NIF3L1-205ENST00000409588 MED9Q9NWA0 146 aa9.67□□□□□ -0.86
NIF3L1-205ENST00000409588 APOBP04114 4563 aaKnown RBP9.66□□□□□ -0.86
NIF3L1-205ENST00000409588 C19orf71A6NCJ1 209 aa9.66□□□□□ -0.86
NIF3L1-205ENST00000409588 RBFOX3A6NFN3 312 aa9.66□□□□□ -0.86
NIF3L1-205ENST00000409588 H7C1H1 209 aa9.66□□□□□ -0.86
NIF3L1-205ENST00000409588 BCL2P10415 239 aa9.66□□□□□ -0.86
NIF3L1-205ENST00000409588 WDR73Q6P4I2 378 aa9.66□□□□□ -0.86
NIF3L1-205ENST00000409588 Q8N976 141 aa9.66□□□□□ -0.86
NIF3L1-205ENST00000409588 NEXN-AS1Q8NBZ9 246 aa9.66□□□□□ -0.86
NIF3L1-205ENST00000409588 DNAJC30Q96LL9 226 aa9.66□□□□□ -0.86
NIF3L1-205ENST00000409588 DERL1Q9BUN8 251 aa9.66□□□□□ -0.86
NIF3L1-205ENST00000409588 GHRHP01286 108 aa9.65□□□□□ -0.86
NIF3L1-205ENST00000409588 IGLV2-8P01709 118 aa9.65□□□□□ -0.86
NIF3L1-205ENST00000409588 P01737 135 aa9.65□□□□□ -0.86
NIF3L1-205ENST00000409588 IGLC6P0CF74 106 aa9.65□□□□□ -0.86
NIF3L1-205ENST00000409588 FER1L6-AS1Q8NA97 138 aa9.65□□□□□ -0.86
NIF3L1-205ENST00000409588 OR2D3Q8NGH3 330 aa9.65□□□□□ -0.86
NIF3L1-205ENST00000409588 KIF25-AS1Q9Y6Z4 181 aa9.65□□□□□ -0.86
NIF3L1-205ENST00000409588 ABCA13Q86UQ4 5058 aa9.65□□□□□ -0.87
NIF3L1-205ENST00000409588 TMEM262E9PQX1 116 aa9.64□□□□□ -0.87
NIF3L1-205ENST00000409588 BLOC1S1P78537 153 aa9.64□□□□□ -0.87
NIF3L1-205ENST00000409588 ATRAIDQ6UW56 229 aa9.64□□□□□ -0.87
NIF3L1-205ENST00000409588 C9orf62Q8N4C0 152 aa9.64□□□□□ -0.87
NIF3L1-205ENST00000409588 FRZBQ92765 325 aa9.64□□□□□ -0.87
NIF3L1-205ENST00000409588 KLK12Q9UKR0 248 aa9.64□□□□□ -0.87
NIF3L1-205ENST00000409588 RAB19A4D1S5 217 aa9.63□□□□□ -0.87
NIF3L1-205ENST00000409588 TRGC1P0CF51 173 aa9.63□□□□□ -0.87
NIF3L1-205ENST00000409588 FUSP35637 526 aaKnown RBP eCLIP9.63□□□□□ -0.87
NIF3L1-205ENST00000409588 AKAP14Q86UN6 197 aa9.63□□□□□ -0.87
NIF3L1-205ENST00000409588 IGKV2D-24A0A075B6R9 120 aa9.61□□□□□ -0.87
NIF3L1-205ENST00000409588 MUC21A0A0G2JKD1 596 aa9.61□□□□□ -0.87
NIF3L1-205ENST00000409588 MUC21A0A140T8X8 626 aa9.61□□□□□ -0.87
NIF3L1-205ENST00000409588 C14orf177Q52M58 125 aa9.61□□□□□ -0.87
NIF3L1-205ENST00000409588 UBE2WQ96B02 151 aa9.61□□□□□ -0.87
NIF3L1-205ENST00000409588 CHCHD5Q9BSY4 110 aa9.61□□□□□ -0.87
NIF3L1-205ENST00000409588 TPPP3Q9BW30 176 aa9.61□□□□□ -0.87
NIF3L1-205ENST00000409588 TRBV20OR9-2A0A075B6H5 130 aa9.6□□□□□ -0.87
NIF3L1-205ENST00000409588 TRBV25-1A0A075B6N4 114 aa9.6□□□□□ -0.87
NIF3L1-205ENST00000409588 TMEM250H0YL14 139 aa9.6□□□□□ -0.87
NIF3L1-205ENST00000409588 M0QY20 66 aa9.6□□□□□ -0.87
NIF3L1-205ENST00000409588 NDUFS6O75380 124 aaKnown RBP9.6□□□□□ -0.87
NIF3L1-205ENST00000409588 CRPP02741 224 aa9.6□□□□□ -0.87
NIF3L1-205ENST00000409588 SSTP61278 116 aa9.6□□□□□ -0.87
NIF3L1-205ENST00000409588 MIAQ16674 131 aa9.6□□□□□ -0.87
NIF3L1-205ENST00000409588 NUDT10Q8NFP7 164 aa9.6□□□□□ -0.87
NIF3L1-205ENST00000409588 NUDT11Q96G61 164 aa9.6□□□□□ -0.87
NIF3L1-205ENST00000409588 C1orf43Q9BWL3 253 aa9.6□□□□□ -0.87
NIF3L1-205ENST00000409588 GZMBP10144 247 aa9.59□□□□□ -0.87
NIF3L1-205ENST00000409588 NTF3P20783 257 aa9.59□□□□□ -0.87
NIF3L1-205ENST00000409588 IQCJQ1A5X6 159 aa9.59□□□□□ -0.87
NIF3L1-205ENST00000409588 LYZL1Q6UWQ5 148 aa9.59□□□□□ -0.87
NIF3L1-205ENST00000409588 LYPD6BQ8NI32 183 aa9.59□□□□□ -0.87
NIF3L1-205ENST00000409588 BAALCQ8WXS3 180 aa9.59□□□□□ -0.87
NIF3L1-205ENST00000409588 CNFNQ9BYD5 112 aa9.59□□□□□ -0.87
NIF3L1-205ENST00000409588 DPH3P1Q9H4G8 78 aa9.59□□□□□ -0.87
NIF3L1-205ENST00000409588 ANGP03950 147 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-205ENST00000409588 RASL11AQ6T310 242 aa9.58□□□□□ -0.88
NIF3L1-205ENST00000409588 OCC1Q8TAD7 63 aa9.58□□□□□ -0.88
NIF3L1-205ENST00000409588 NIT2Q9NQR4 276 aa9.58□□□□□ -0.88
NIF3L1-205ENST00000409588 IGHV1-24A0A0C4DH33 117 aa9.57□□□□□ -0.88
NIF3L1-205ENST00000409588 CTRLP40313 264 aa9.57□□□□□ -0.88
NIF3L1-205ENST00000409588 Q5VSD8 79 aa9.57□□□□□ -0.88
NIF3L1-205ENST00000409588 ENHOQ6UWT2 76 aa9.57□□□□□ -0.88
NIF3L1-205ENST00000409588 NTM-AS1Q6ZSK4 140 aa9.57□□□□□ -0.88
NIF3L1-205ENST00000409588 PGLYRP4Q96LB8 373 aa9.57□□□□□ -0.88
NIF3L1-205ENST00000409588 RPP21Q9H633 154 aaKnown RBP9.57□□□□□ -0.88
NIF3L1-205ENST00000409588 PRR34Q9NV39 138 aa9.57□□□□□ -0.88
NIF3L1-205ENST00000409588 A0A1B0GUV1 79 aa9.56□□□□□ -0.88
NIF3L1-205ENST00000409588 MGPP08493 103 aa9.56□□□□□ -0.88
NIF3L1-205ENST00000409588 INAFM2P0DMQ5 153 aa9.56□□□□□ -0.88
NIF3L1-205ENST00000409588 WFDC2Q14508 124 aa9.56□□□□□ -0.88
NIF3L1-205ENST00000409588 MPV17L2Q567V2 206 aa9.56□□□□□ -0.88
NIF3L1-205ENST00000409588 SUMO4Q6EEV6 95 aa9.56□□□□□ -0.88
NIF3L1-205ENST00000409588 TEX261Q6UWH6 196 aa9.56□□□□□ -0.88
NIF3L1-205ENST00000409588 Q6ZSA8 131 aa9.56□□□□□ -0.88
NIF3L1-205ENST00000409588 SMIM15Q7Z3B0 74 aa9.56□□□□□ -0.88
NIF3L1-205ENST00000409588 C15orf54Q8N8G6 183 aa9.56□□□□□ -0.88
NIF3L1-205ENST00000409588 LECT2O14960 151 aa9.55□□□□□ -0.88
NIF3L1-205ENST00000409588 TWIST1Q15672 202 aa9.55□□□□□ -0.88
NIF3L1-205ENST00000409588 FAM231DQ6ZW35 169 aa9.55□□□□□ -0.88
NIF3L1-205ENST00000409588 TRAV8-4A0A0B4J246 113 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms