RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 IGHV4OR15-8A0A075B7B6 117 aa11.31□□□□□ -0.6
LIMK2-204ENST00000406516 A0A087WW49 117 aa11.31□□□□□ -0.6
LIMK2-204ENST00000406516 ZNF815PA8K554 130 aa11.31□□□□□ -0.6
LIMK2-204ENST00000406516 TSHBP01222 138 aa11.31□□□□□ -0.6
LIMK2-204ENST00000406516 CRYGDP07320 174 aa11.31□□□□□ -0.6
LIMK2-204ENST00000406516 CD300EQ496F6 205 aaPredicted RBP11.31□□□□□ -0.6
LIMK2-204ENST00000406516 POLR2KP53803 58 aaKnown RBP11.3□□□□□ -0.6
LIMK2-204ENST00000406516 TMEM86BQ8N661 226 aa11.3□□□□□ -0.6
LIMK2-204ENST00000406516 MDFICQ9P1T7 246 aa11.3□□□□□ -0.6
LIMK2-204ENST00000406516 C11orf86A6NJI1 115 aa11.29□□□□□ -0.6
LIMK2-204ENST00000406516 SCGB1D4Q6XE38 83 aa11.29□□□□□ -0.6
LIMK2-204ENST00000406516 KIR2DL4Q99706 377 aa11.29□□□□□ -0.6
LIMK2-204ENST00000406516 SDHAF1A6NFY7 115 aa11.29□□□□□ -0.6
LIMK2-204ENST00000406516 FOXI2Q6ZQN5 318 aa11.29□□□□□ -0.6
LIMK2-204ENST00000406516 KLHL30-AS1Q8NEE0 82 aa11.29□□□□□ -0.6
LIMK2-204ENST00000406516 PLEKHB2Q96CS7 222 aa11.29□□□□□ -0.6
LIMK2-204ENST00000406516 IGIPA6NJ69 53 aa11.28□□□□□ -0.6
LIMK2-204ENST00000406516 VCYO14598 125 aa11.28□□□□□ -0.6
LIMK2-204ENST00000406516 RNASE1P07998 156 aaKnown RBP11.28□□□□□ -0.6
LIMK2-204ENST00000406516 SAMD13Q5VXD3 122 aa11.28□□□□□ -0.6
LIMK2-204ENST00000406516 AMTNQ6UX39 209 aa11.28□□□□□ -0.6
LIMK2-204ENST00000406516 IGLV4-69A0A075B6H9 119 aa11.28□□□□□ -0.6
LIMK2-204ENST00000406516 TEX48A0A1B0GUV7 120 aa11.28□□□□□ -0.6
LIMK2-204ENST00000406516 H3BMG7 143 aa11.28□□□□□ -0.6
LIMK2-204ENST00000406516 ZNF256Q9Y2P7 627 aaPredicted RBP11.28□□□□□ -0.6
LIMK2-204ENST00000406516 C2CD3Q4AC94 2353 aa11.27□□□□□ -0.6
LIMK2-204ENST00000406516 IGHV3-16A0A0C4DH30 117 aa11.27□□□□□ -0.6
LIMK2-204ENST00000406516 A0A0J9YX75 114 aa11.27□□□□□ -0.6
LIMK2-204ENST00000406516 LINC01619G3V211 115 aa11.27□□□□□ -0.6
LIMK2-204ENST00000406516 SNRPD3P62318 126 aaKnown RBP11.27□□□□□ -0.6
LIMK2-204ENST00000406516 RPL32P62910 135 aaKnown RBP11.27□□□□□ -0.6
LIMK2-204ENST00000406516 ZNF56Q15929 161 aa11.27□□□□□ -0.6
LIMK2-204ENST00000406516 SPINK13Q1W4C9 94 aa11.27□□□□□ -0.6
LIMK2-204ENST00000406516 RRN3P1Q2M238 152 aa11.27□□□□□ -0.6
LIMK2-204ENST00000406516 FBN1P35555 2871 aaKnown RBP11.27□□□□□ -0.61
LIMK2-204ENST00000406516 SYNJ2BPP57105 145 aa11.27□□□□□ -0.61
LIMK2-204ENST00000406516 Q8N1Y9 231 aa11.27□□□□□ -0.61
LIMK2-204ENST00000406516 ATRQ13535 2644 aa11.27□□□□□ -0.61
LIMK2-204ENST00000406516 PMVKQ15126 192 aa11.26□□□□□ -0.61
LIMK2-204ENST00000406516 MTURNQ8N3F0 131 aa11.26□□□□□ -0.61
LIMK2-204ENST00000406516 SORL1Q92673 2214 aa11.26□□□□□ -0.61
LIMK2-204ENST00000406516 WFDC2Q14508 124 aa11.26□□□□□ -0.61
LIMK2-204ENST00000406516 C9orf85Q96MD7 179 aa11.26□□□□□ -0.61
LIMK2-204ENST00000406516 LGALS9O00182 355 aa11.25□□□□□ -0.61
LIMK2-204ENST00000406516 SRSF9Q13242 221 aaKnown RBP eCLIP11.25□□□□□ -0.61
LIMK2-204ENST00000406516 A0A1B0GWB2 263 aa11.25□□□□□ -0.61
LIMK2-204ENST00000406516 K7EQG2 157 aa11.25□□□□□ -0.61
LIMK2-204ENST00000406516 ZNF580Q9UK33 172 aa11.25□□□□□ -0.61
LIMK2-204ENST00000406516 TRBV27A0A0K0K1C4 114 aa11.24□□□□□ -0.61
LIMK2-204ENST00000406516 HERVK_113P61574 105 aa11.24□□□□□ -0.61
LIMK2-204ENST00000406516 TMEM170BQ5T4T1 132 aa11.24□□□□□ -0.61
LIMK2-204ENST00000406516 MORN3Q6PF18 240 aaPredicted RBP11.24□□□□□ -0.61
LIMK2-204ENST00000406516 SYT8Q8NBV8 401 aa11.24□□□□□ -0.61
LIMK2-204ENST00000406516 TMEM141Q96I45 108 aa11.24□□□□□ -0.61
LIMK2-204ENST00000406516 ODF3Q96PU9 254 aa11.24□□□□□ -0.61
LIMK2-204ENST00000406516 PGPEP1Q9NXJ5 209 aa11.24□□□□□ -0.61
LIMK2-204ENST00000406516 IGHV1OR15-1A0A075B7D0 117 aa11.23□□□□□ -0.61
LIMK2-204ENST00000406516 TIMM17AQ99595 171 aa11.23□□□□□ -0.61
LIMK2-204ENST00000406516 M0QY20 66 aa11.23□□□□□ -0.61
LIMK2-204ENST00000406516 PAPPA-AS1Q5QFB9 102 aa11.23□□□□□ -0.61
LIMK2-204ENST00000406516 F8W1H4 67 aa11.22□□□□□ -0.61
LIMK2-204ENST00000406516 Q6ZSV7 163 aa11.22□□□□□ -0.61
LIMK2-204ENST00000406516 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.22□□□□□ -0.61
LIMK2-204ENST00000406516 ZNRF2Q8NHG8 242 aa11.22□□□□□ -0.61
LIMK2-204ENST00000406516 OPRPNQ99935 248 aaPredicted RBP11.22□□□□□ -0.61
LIMK2-204ENST00000406516 MRPL16Q9NX20 251 aaKnown RBP11.22□□□□□ -0.61
LIMK2-204ENST00000406516 TRBV6-5A0A0K0K1A5 114 aa11.22□□□□□ -0.61
LIMK2-204ENST00000406516 LINC01549A6NIU2 74 aa11.22□□□□□ -0.61
LIMK2-204ENST00000406516 TSPEAR-AS2P59090 65 aa11.22□□□□□ -0.61
LIMK2-204ENST00000406516 KRTAP24-1Q3LI83 254 aa11.22□□□□□ -0.61
LIMK2-204ENST00000406516 SFTA2Q6UW10 78 aa11.22□□□□□ -0.61
LIMK2-204ENST00000406516 TMEM238LA0A1B0GVL6 79 aa11.21□□□□□ -0.61
LIMK2-204ENST00000406516 A6NJY4 79 aa11.21□□□□□ -0.61
LIMK2-204ENST00000406516 ZNF876PQ49A33 203 aa11.21□□□□□ -0.61
LIMK2-204ENST00000406516 SH2D6Q7Z4S9 175 aa11.21□□□□□ -0.61
LIMK2-204ENST00000406516 ZNF702PQ9H963 129 aa11.21□□□□□ -0.61
LIMK2-204ENST00000406516 SPANXB1Q9NS25 103 aaPredicted RBP11.21□□□□□ -0.61
LIMK2-204ENST00000406516 HOXD3P31249 432 aaPredicted RBP11.21□□□□□ -0.62
LIMK2-204ENST00000406516 ETDBQ3ZM63 59 aa11.21□□□□□ -0.62
LIMK2-204ENST00000406516 GAGE13Q4V321 117 aa11.21□□□□□ -0.62
LIMK2-204ENST00000406516 A0A0J9YY99 117 aa11.2□□□□□ -0.62
LIMK2-204ENST00000406516 HTN1P15515 57 aa11.2□□□□□ -0.62
LIMK2-204ENST00000406516 TMEM89A2RUT3 159 aa11.2□□□□□ -0.62
LIMK2-204ENST00000406516 APOMO95445 188 aa11.2□□□□□ -0.62
LIMK2-204ENST00000406516 TRPT1Q86TN4 253 aaKnown RBP11.19□□□□□ -0.62
LIMK2-204ENST00000406516 UBE2D1P51668 147 aa11.19□□□□□ -0.62
LIMK2-204ENST00000406516 LINC01006Q8NI28 216 aa11.18□□□□□ -0.62
LIMK2-204ENST00000406516 KNCNA6PVL3 124 aa11.18□□□□□ -0.62
LIMK2-204ENST00000406516 P0DMU3 169 aa11.18□□□□□ -0.62
LIMK2-204ENST00000406516 FAM231AP0DMU4 169 aa11.18□□□□□ -0.62
LIMK2-204ENST00000406516 FAM231CP0DMU5 169 aa11.18□□□□□ -0.62
LIMK2-204ENST00000406516 NSUN5P1Q3KNT7 163 aa11.18□□□□□ -0.62
LIMK2-204ENST00000406516 PRO0461Q9UI25 63 aa11.18□□□□□ -0.62
LIMK2-204ENST00000406516 IGHV3-73A0A0B4J1V6 119 aa11.17□□□□□ -0.62
LIMK2-204ENST00000406516 RBMY1A1P0DJD3 496 aaKnown RBP11.17□□□□□ -0.62
LIMK2-204ENST00000406516 RBMY1CP0DJD4 496 aa11.17□□□□□ -0.62
LIMK2-204ENST00000406516 RBMY1FQ15415 496 aaKnown RBP11.17□□□□□ -0.62
LIMK2-204ENST00000406516 DEFB136Q30KP8 78 aa11.17□□□□□ -0.62
LIMK2-204ENST00000406516 Q8N2B8 174 aa11.17□□□□□ -0.62
LIMK2-204ENST00000406516 LOC107984156A0A0G2JMH3 177 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms