RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 PSCAO43653 123 aa6.77□□□□□ -1.33
LIG4-202ENST00000405925 RASL10AQ92737 203 aa6.77□□□□□ -1.33
LIG4-202ENST00000405925 MRPL35Q9NZE8 188 aaKnown RBP6.77□□□□□ -1.33
LIG4-202ENST00000405925 K7EQD1 137 aa6.77□□□□□ -1.33
LIG4-202ENST00000405925 IGLC6P0CF74 106 aa6.77□□□□□ -1.33
LIG4-202ENST00000405925 RPL13AP40429 203 aaKnown RBP6.77□□□□□ -1.33
LIG4-202ENST00000405925 PROK1P58294 105 aa6.77□□□□□ -1.33
LIG4-202ENST00000405925 LINC00158P58513 81 aa6.77□□□□□ -1.33
LIG4-202ENST00000405925 PLEKHB2Q96CS7 222 aa6.77□□□□□ -1.33
LIG4-202ENST00000405925 TMEM141Q96I45 108 aa6.77□□□□□ -1.33
LIG4-202ENST00000405925 TIMM21Q9BVV7 248 aa6.77□□□□□ -1.33
LIG4-202ENST00000405925 ODF3L2Q3SX64 289 aa6.76□□□□□ -1.33
LIG4-202ENST00000405925 PRR9Q5T870 116 aa6.76□□□□□ -1.33
LIG4-202ENST00000405925 C16orf95Q9H693 158 aa6.76□□□□□ -1.33
LIG4-202ENST00000405925 NUPR1O60356 82 aa6.76□□□□□ -1.33
LIG4-202ENST00000405925 SMIM13P0DJ93 91 aa6.76□□□□□ -1.33
LIG4-202ENST00000405925 Q6ZQT7 251 aa6.76□□□□□ -1.33
LIG4-202ENST00000405925 ATP6V0E2Q8NHE4 81 aa6.76□□□□□ -1.33
LIG4-202ENST00000405925 ZNF625Q96I27 306 aaPredicted RBP6.76□□□□□ -1.33
LIG4-202ENST00000405925 PRIMA1Q86XR5 153 aa6.76□□□□□ -1.33
LIG4-202ENST00000405925 NDUFAF3Q9BU61 184 aa6.76□□□□□ -1.33
LIG4-202ENST00000405925 HHLA3Q9XRX5 114 aa6.76□□□□□ -1.33
LIG4-202ENST00000405925 TEX48A0A1B0GUV7 120 aa6.76□□□□□ -1.33
LIG4-202ENST00000405925 J3QR89 54 aa6.76□□□□□ -1.33
LIG4-202ENST00000405925 MRPL23Q16540 153 aaKnown RBP6.76□□□□□ -1.33
LIG4-202ENST00000405925 FAM110AQ9BQ89 295 aa6.76□□□□□ -1.33
LIG4-202ENST00000405925 NHP2Q9NX24 153 aaKnown RBP6.76□□□□□ -1.33
LIG4-202ENST00000405925 A0A1B0GXF2 115 aa6.75□□□□□ -1.33
LIG4-202ENST00000405925 PRB2P02812 416 aaPredicted RBP6.75□□□□□ -1.33
LIG4-202ENST00000405925 PRM2P04554 102 aa6.75□□□□□ -1.33
LIG4-202ENST00000405925 FABP2P12104 132 aa6.75□□□□□ -1.33
LIG4-202ENST00000405925 RPL24P83731 157 aaKnown RBP6.75□□□□□ -1.33
LIG4-202ENST00000405925 FAM222AQ5U5X8 452 aa6.75□□□□□ -1.33
LIG4-202ENST00000405925 ZNF747Q9BV97 191 aa6.75□□□□□ -1.33
LIG4-202ENST00000405925 LINC00587B1AMM8 73 aa6.75□□□□□ -1.33
LIG4-202ENST00000405925 F8VRH5 84 aa6.75□□□□□ -1.33
LIG4-202ENST00000405925 TRBV7-3A0A075B6L6 115 aa6.75□□□□□ -1.33
LIG4-202ENST00000405925 NPC2P61916 151 aa6.75□□□□□ -1.33
LIG4-202ENST00000405925 COA6Q5JTJ3 125 aaKnown RBP6.75□□□□□ -1.33
LIG4-202ENST00000405925 SFTA2Q6UW10 78 aa6.75□□□□□ -1.33
LIG4-202ENST00000405925 C11orf21Q9P2W6 132 aa6.75□□□□□ -1.33
LIG4-202ENST00000405925 LBHQ53QV2 105 aaPredicted RBP6.74□□□□□ -1.33
LIG4-202ENST00000405925 GATD1Q8NB37 220 aa6.74□□□□□ -1.33
LIG4-202ENST00000405925 RNF151Q2KHN1 245 aa6.74□□□□□ -1.33
LIG4-202ENST00000405925 ZNF664Q8N3J9 261 aa6.74□□□□□ -1.33
LIG4-202ENST00000405925 COL12A1Q99715 3063 aa6.74□□□□□ -1.33
LIG4-202ENST00000405925 GAGE10A6NGK3 116 aa6.74□□□□□ -1.33
LIG4-202ENST00000405925 IGLV1-51P01701 117 aa6.74□□□□□ -1.33
LIG4-202ENST00000405925 ZFP2Q6ZN57 461 aa6.74□□□□□ -1.33
LIG4-202ENST00000405925 LINC00173Q6ZV60 143 aa6.74□□□□□ -1.33
LIG4-202ENST00000405925 DNAJC30Q96LL9 226 aa6.74□□□□□ -1.33
LIG4-202ENST00000405925 DKK2Q9UBU2 259 aa6.74□□□□□ -1.33
LIG4-202ENST00000405925 ICOSQ9Y6W8 199 aa6.74□□□□□ -1.33
LIG4-202ENST00000405925 AGRNO00468 2067 aa6.73□□□□□ -1.33
LIG4-202ENST00000405925 PRSS29PA6NIE9 313 aa6.73□□□□□ -1.33
LIG4-202ENST00000405925 KLLNB2CW77 178 aa6.73□□□□□ -1.33
LIG4-202ENST00000405925 FSHBP01225 129 aa6.73□□□□□ -1.33
LIG4-202ENST00000405925 P0DMU3 169 aa6.73□□□□□ -1.33
LIG4-202ENST00000405925 FAM231AP0DMU4 169 aa6.73□□□□□ -1.33
LIG4-202ENST00000405925 FAM231CP0DMU5 169 aa6.73□□□□□ -1.33
LIG4-202ENST00000405925 LGALS9BQ3B8N2 356 aa6.73□□□□□ -1.33
LIG4-202ENST00000405925 LGALS9CQ6DKI2 356 aa6.73□□□□□ -1.33
LIG4-202ENST00000405925 K7EMI3 77 aa6.73□□□□□ -1.33
LIG4-202ENST00000405925 RPL39P62891 51 aaKnown RBP6.73□□□□□ -1.33
LIG4-202ENST00000405925 UBE2WQ96B02 151 aa6.73□□□□□ -1.33
LIG4-202ENST00000405925 PRO0255Q9UI72 69 aa6.73□□□□□ -1.33
LIG4-202ENST00000405925 A0A096LNT2 108 aa6.73□□□□□ -1.33
LIG4-202ENST00000405925 Q8N2B8 174 aa6.73□□□□□ -1.33
LIG4-202ENST00000405925 TMEM238C9JI98 176 aa6.72□□□□□ -1.33
LIG4-202ENST00000405925 ZNF479Q96JC4 524 aa6.72□□□□□ -1.33
LIG4-202ENST00000405925 DAZ2Q13117 558 aaKnown RBP6.72□□□□□ -1.33
LIG4-202ENST00000405925 DAZ4Q86SG3 579 aaKnown RBP6.72□□□□□ -1.33
LIG4-202ENST00000405925 Q9HAA7 133 aa6.72□□□□□ -1.33
LIG4-202ENST00000405925 DAZ3Q9NR90 486 aaKnown RBP6.72□□□□□ -1.33
LIG4-202ENST00000405925 TRAV4A0A0B4J268 109 aa6.72□□□□□ -1.33
LIG4-202ENST00000405925 MYMXA0A1B0GTQ4 84 aa6.72□□□□□ -1.33
LIG4-202ENST00000405925 ESDP10768 282 aa6.72□□□□□ -1.33
LIG4-202ENST00000405925 XCL1P47992 114 aa6.72□□□□□ -1.33
LIG4-202ENST00000405925 ADGRG4Q8IZF6 3080 aa6.71□□□□□ -1.33
LIG4-202ENST00000405925 SMIM9A6NGZ8 99 aa6.71□□□□□ -1.34
LIG4-202ENST00000405925 HSD52Q0P140 79 aa6.71□□□□□ -1.34
LIG4-202ENST00000405925 AMTNQ6UX39 209 aa6.71□□□□□ -1.34
LIG4-202ENST00000405925 RNASE3P12724 160 aaKnown RBP6.71□□□□□ -1.34
LIG4-202ENST00000405925 TRBV10-1A0A0K0K1A3 114 aa6.71□□□□□ -1.34
LIG4-202ENST00000405925 CCL18P55774 89 aa6.71□□□□□ -1.34
LIG4-202ENST00000405925 C11orf45Q8TAV5 145 aa6.71□□□□□ -1.34
LIG4-202ENST00000405925 ORAOV1Q8WV07 137 aa6.71□□□□□ -1.34
LIG4-202ENST00000405925 SPANXA1Q9NS26 97 aa6.71□□□□□ -1.34
LIG4-202ENST00000405925 IGLV10-54A0A075B6I4 117 aa6.7□□□□□ -1.34
LIG4-202ENST00000405925 TRAV26-1A0A087WT03 109 aa6.7□□□□□ -1.34
LIG4-202ENST00000405925 ZNF561-AS1K7EIQ3 104 aa6.7□□□□□ -1.34
LIG4-202ENST00000405925 IGHV4-30-4P0DP06 118 aa6.7□□□□□ -1.34
LIG4-202ENST00000405925 FGF6P10767 208 aa6.7□□□□□ -1.34
LIG4-202ENST00000405925 VPS25Q9BRG1 176 aa6.7□□□□□ -1.34
LIG4-202ENST00000405925 DNAL4O96015 105 aa6.7□□□□□ -1.34
LIG4-202ENST00000405925 MPV17L2Q567V2 206 aa6.7□□□□□ -1.34
LIG4-202ENST00000405925 MRPS16Q9Y3D3 137 aaKnown RBP6.7□□□□□ -1.34
LIG4-202ENST00000405925 GCN1Q92616 2671 aaKnown RBP6.7□□□□□ -1.34
LIG4-202ENST00000405925 IGKV2D-24A0A075B6R9 120 aa6.7□□□□□ -1.34
LIG4-202ENST00000405925 A0A0J9YXV3 536 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms