RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 FAM231CP0DMU5 169 aa12.25□□□□□ -0.45
SMIM11A-202ENST00000399295 HOXA5P20719 270 aa12.25□□□□□ -0.45
SMIM11A-202ENST00000399295 C14orf178Q8N769 122 aaPredicted RBP12.25□□□□□ -0.45
SMIM11A-202ENST00000399295 C5orf52A6NGY3 159 aa12.24□□□□□ -0.45
SMIM11A-202ENST00000399295 D6R8Y8 96 aa12.24□□□□□ -0.45
SMIM11A-202ENST00000399295 BAGE3Q86Y29 109 aa12.24□□□□□ -0.45
SMIM11A-202ENST00000399295 POM121L12Q8N7R1 296 aa12.24□□□□□ -0.45
SMIM11A-202ENST00000399295 C18orf32Q8TCD1 76 aa12.24□□□□□ -0.45
SMIM11A-202ENST00000399295 RASL10AQ92737 203 aa12.24□□□□□ -0.45
SMIM11A-202ENST00000399295 PRELID3AQ96N28 172 aa12.24□□□□□ -0.45
SMIM11A-202ENST00000399295 KIF25-AS1Q9Y6Z4 181 aa12.24□□□□□ -0.45
SMIM11A-202ENST00000399295 TRAV26-1A0A087WT03 109 aa12.23□□□□□ -0.45
SMIM11A-202ENST00000399295 PPP1R17O96001 155 aa12.23□□□□□ -0.45
SMIM11A-202ENST00000399295 SNRPEP62304 92 aaKnown RBP12.23□□□□□ -0.45
SMIM11A-202ENST00000399295 RHODO00212 210 aa12.22□□□□□ -0.45
SMIM11A-202ENST00000399295 NUDT3O95989 172 aa12.22□□□□□ -0.45
SMIM11A-202ENST00000399295 MGPP08493 103 aa12.22□□□□□ -0.45
SMIM11A-202ENST00000399295 IGHV3-53P01767 116 aa12.21□□□□□ -0.45
SMIM11A-202ENST00000399295 CRYGDP07320 174 aa12.21□□□□□ -0.45
SMIM11A-202ENST00000399295 KMT2AQ03164 3969 aa12.21□□□□□ -0.46
SMIM11A-202ENST00000399295 A0A0J9YY99 117 aa12.2□□□□□ -0.46
SMIM11A-202ENST00000399295 CIDEAO60543 219 aa12.2□□□□□ -0.46
SMIM11A-202ENST00000399295 LINC00315P59091 139 aa12.2□□□□□ -0.46
SMIM11A-202ENST00000399295 UBE2DNLQ8IWF7 75 aa12.2□□□□□ -0.46
SMIM11A-202ENST00000399295 JPT2Q9H910 190 aa12.2□□□□□ -0.46
SMIM11A-202ENST00000399295 A0A087WWL8 130 aa12.19□□□□□ -0.46
SMIM11A-202ENST00000399295 RS1O15537 224 aa12.19□□□□□ -0.46
SMIM11A-202ENST00000399295 ESDP10768 282 aa12.19□□□□□ -0.46
SMIM11A-202ENST00000399295 FAM74A4Q5TZK3 123 aa12.19□□□□□ -0.46
SMIM11A-202ENST00000399295 ZFP2Q6ZN57 461 aa12.19□□□□□ -0.46
SMIM11A-202ENST00000399295 F5H697 171 aa12.18□□□□□ -0.46
SMIM11A-202ENST00000399295 SMKR1H3BMG3 65 aa12.18□□□□□ -0.46
SMIM11A-202ENST00000399295 H3BNG1 76 aa12.18□□□□□ -0.46
SMIM11A-202ENST00000399295 H7C1H1 209 aa12.18□□□□□ -0.46
SMIM11A-202ENST00000399295 TNFRSF6BO95407 300 aa12.18□□□□□ -0.46
SMIM11A-202ENST00000399295 NCR2O95944 276 aa12.18□□□□□ -0.46
SMIM11A-202ENST00000399295 ZNF56Q15929 161 aa12.18□□□□□ -0.46
SMIM11A-202ENST00000399295 CFAP126Q5VTH2 177 aa12.18□□□□□ -0.46
SMIM11A-202ENST00000399295 CHCHD1Q96BP2 118 aaKnown RBP12.18□□□□□ -0.46
SMIM11A-202ENST00000399295 MAP1LC3AQ9H492 121 aa12.18□□□□□ -0.46
SMIM11A-202ENST00000399295 PRSS47A8MTI9 375 aa12.17□□□□□ -0.46
SMIM11A-202ENST00000399295 SERF1AO75920 110 aa12.17□□□□□ -0.46
SMIM11A-202ENST00000399295 NPYP01303 97 aa12.17□□□□□ -0.46
SMIM11A-202ENST00000399295 S100A2P29034 98 aa12.17□□□□□ -0.46
SMIM11A-202ENST00000399295 FHL2Q14192 279 aa12.17□□□□□ -0.46
SMIM11A-202ENST00000399295 IQCJQ1A5X6 159 aa12.17□□□□□ -0.46
SMIM11A-202ENST00000399295 HIST3H2BBQ8N257 126 aa12.17□□□□□ -0.46
SMIM11A-202ENST00000399295 ZNF479Q96JC4 524 aa12.17□□□□□ -0.46
SMIM11A-202ENST00000399295 C20orf78Q9BR46 151 aa12.17□□□□□ -0.46
SMIM11A-202ENST00000399295 SAMD10Q9BYL1 202 aa12.17□□□□□ -0.46
SMIM11A-202ENST00000399295 TRAV4A0A0B4J268 109 aa12.16□□□□□ -0.46
SMIM11A-202ENST00000399295 SUMO4Q6EEV6 95 aa12.16□□□□□ -0.46
SMIM11A-202ENST00000399295 UFSP1Q6NVU6 142 aa12.16□□□□□ -0.46
SMIM11A-202ENST00000399295 NIT1Q86X76 327 aa12.16□□□□□ -0.46
SMIM11A-202ENST00000399295 NRACQ8N912 160 aa12.16□□□□□ -0.46
SMIM11A-202ENST00000399295 OR4C5Q8NGB2 326 aa12.16□□□□□ -0.46
SMIM11A-202ENST00000399295 PRSS3P2Q8NHM4 247 aa12.16□□□□□ -0.46
SMIM11A-202ENST00000399295 VSIG2Q96IQ7 327 aa12.16□□□□□ -0.46
SMIM11A-202ENST00000399295 PRO0255Q9UI72 69 aa12.16□□□□□ -0.46
SMIM11A-202ENST00000399295 HHLA3Q9XRX5 114 aa12.16□□□□□ -0.46
SMIM11A-202ENST00000399295 DNAH6Q9C0G6 4158 aa12.15□□□□□ -0.46
SMIM11A-202ENST00000399295 TRAV26-2A0A0B4J265 109 aa12.15□□□□□ -0.46
SMIM11A-202ENST00000399295 TRGV4A0A0C4DH28 118 aa12.15□□□□□ -0.46
SMIM11A-202ENST00000399295 LOC105371267A0A1B0GV96 52 aa12.15□□□□□ -0.46
SMIM11A-202ENST00000399295 PAX4O43316 350 aa12.15□□□□□ -0.46
SMIM11A-202ENST00000399295 LINC00614P0C842 121 aa12.15□□□□□ -0.46
SMIM11A-202ENST00000399295 NXT2Q9NPJ8 142 aaKnown RBP12.15□□□□□ -0.46
SMIM11A-202ENST00000399295 HSBP1O75506 76 aa12.14□□□□□ -0.47
SMIM11A-202ENST00000399295 PMCHP20382 165 aa12.14□□□□□ -0.47
SMIM11A-202ENST00000399295 CRYBA4P53673 196 aa12.14□□□□□ -0.47
SMIM11A-202ENST00000399295 CCL18P55774 89 aa12.14□□□□□ -0.47
SMIM11A-202ENST00000399295 FA2HQ7L5A8 372 aa12.14□□□□□ -0.47
SMIM11A-202ENST00000399295 TMEM18Q96B42 140 aa12.14□□□□□ -0.47
SMIM11A-202ENST00000399295 PACRGQ96M98 296 aaPredicted RBP12.14□□□□□ -0.47
SMIM11A-202ENST00000399295 TRBV6-5A0A0K0K1A5 114 aa12.13□□□□□ -0.47
SMIM11A-202ENST00000399295 M0QY20 66 aa12.13□□□□□ -0.47
SMIM11A-202ENST00000399295 GATA1P15976 413 aaPredicted RBP12.13□□□□□ -0.47
SMIM11A-202ENST00000399295 LINC00310P59036 64 aa12.13□□□□□ -0.47
SMIM11A-202ENST00000399295 RPL32P62910 135 aaKnown RBP12.13□□□□□ -0.47
SMIM11A-202ENST00000399295 RNASEKQ6P5S7 137 aaKnown RBP12.13□□□□□ -0.47
SMIM11A-202ENST00000399295 NACAE9PAV3 2078 aa12.13□□□□□ -0.47
SMIM11A-202ENST00000399295 A0A096LPF7 62 aa12.12□□□□□ -0.47
SMIM11A-202ENST00000399295 LOC389332A0A1B0GUA5 103 aa12.12□□□□□ -0.47
SMIM11A-202ENST00000399295 GAS8-AS1O95177 125 aa12.12□□□□□ -0.47
SMIM11A-202ENST00000399295 SUMO2P61956 95 aaKnown RBP12.12□□□□□ -0.47
SMIM11A-202ENST00000399295 Q8N8P6 123 aa12.12□□□□□ -0.47
SMIM11A-202ENST00000399295 ST20Q9HBF5 79 aa12.12□□□□□ -0.47
SMIM11A-202ENST00000399295 NIT2Q9NQR4 276 aa12.12□□□□□ -0.47
SMIM11A-202ENST00000399295 AP5S1Q9NUS5 200 aa12.12□□□□□ -0.47
SMIM11A-202ENST00000399295 BIRC6Q9NR09 4857 aa12.11□□□□□ -0.47
SMIM11A-202ENST00000399295 K7EMI3 77 aa12.11□□□□□ -0.47
SMIM11A-202ENST00000399295 IFI27P40305 119 aaPredicted RBP12.11□□□□□ -0.47
SMIM11A-202ENST00000399295 PDZD11Q5EBL8 140 aa12.11□□□□□ -0.47
SMIM11A-202ENST00000399295 URB1-AS1Q96HZ7 61 aa12.11□□□□□ -0.47
SMIM11A-202ENST00000399295 LINC00588Q9Y4M8 146 aa12.11□□□□□ -0.47
SMIM11A-202ENST00000399295 ICOSQ9Y6W8 199 aa12.11□□□□□ -0.47
SMIM11A-202ENST00000399295 IGHV3-73A0A0B4J1V6 119 aa12.1□□□□□ -0.47
SMIM11A-202ENST00000399295 LINC01546A6NGU7 62 aa12.1□□□□□ -0.47
SMIM11A-202ENST00000399295 NUPR1O60356 82 aa12.1□□□□□ -0.47
SMIM11A-202ENST00000399295 RPL39LQ96EH5 51 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms