RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 PMVKQ15126 192 aa8.44□□□□□ -1.06
C4orf3-201ENST00000399075 NRGNQ92686 78 aa8.44□□□□□ -1.06
C4orf3-201ENST00000399075 UBE2E2Q96LR5 201 aa8.44□□□□□ -1.06
C4orf3-201ENST00000399075 VPS13CQ709C8 3753 aa8.44□□□□□ -1.06
C4orf3-201ENST00000399075 IGLV4-69A0A075B6H9 119 aa8.44□□□□□ -1.06
C4orf3-201ENST00000399075 IGLL5B9A064 214 aa8.44□□□□□ -1.06
C4orf3-201ENST00000399075 MEIG1Q5JSS6 88 aa8.44□□□□□ -1.06
C4orf3-201ENST00000399075 F5H697 171 aa8.43□□□□□ -1.06
C4orf3-201ENST00000399075 SYNJ2BPP57105 145 aa8.43□□□□□ -1.06
C4orf3-201ENST00000399075 Q6YL49 198 aa8.43□□□□□ -1.06
C4orf3-201ENST00000399075 Q8N1Y9 231 aa8.43□□□□□ -1.06
C4orf3-201ENST00000399075 ZNF702PQ9H963 129 aa8.43□□□□□ -1.06
C4orf3-201ENST00000399075 PIEZO1Q92508 2521 aa8.43□□□□□ -1.06
C4orf3-201ENST00000399075 RHOHQ15669 191 aa8.43□□□□□ -1.06
C4orf3-201ENST00000399075 MDFICQ9P1T7 246 aa8.43□□□□□ -1.06
C4orf3-201ENST00000399075 ZNF256Q9Y2P7 627 aaPredicted RBP8.43□□□□□ -1.06
C4orf3-201ENST00000399075 M0QY20 66 aa8.43□□□□□ -1.06
C4orf3-201ENST00000399075 HERVK_113P61574 105 aa8.43□□□□□ -1.06
C4orf3-201ENST00000399075 NSUN5P1Q3KNT7 163 aa8.43□□□□□ -1.06
C4orf3-201ENST00000399075 COL12A1Q99715 3063 aa8.42□□□□□ -1.06
C4orf3-201ENST00000399075 USP9XQ93008 2570 aaPredicted RBP8.42□□□□□ -1.06
C4orf3-201ENST00000399075 SPG11Q96JI7 2443 aa8.42□□□□□ -1.06
C4orf3-201ENST00000399075 C11orf86A6NJI1 115 aa8.42□□□□□ -1.06
C4orf3-201ENST00000399075 HOXD3P31249 432 aaPredicted RBP8.42□□□□□ -1.06
C4orf3-201ENST00000399075 TRPT1Q86TN4 253 aaKnown RBP8.42□□□□□ -1.06
C4orf3-201ENST00000399075 TRGV11A0A075B6L2 103 aa8.42□□□□□ -1.06
C4orf3-201ENST00000399075 TRAV12-2A0A075B6T6 113 aa8.42□□□□□ -1.06
C4orf3-201ENST00000399075 ZNF815PA8K554 130 aa8.42□□□□□ -1.06
C4orf3-201ENST00000399075 F8W1H4 67 aa8.42□□□□□ -1.06
C4orf3-201ENST00000399075 SPINK13Q1W4C9 94 aa8.41□□□□□ -1.06
C4orf3-201ENST00000399075 RRN3P1Q2M238 152 aa8.41□□□□□ -1.06
C4orf3-201ENST00000399075 MORN3Q6PF18 240 aaPredicted RBP8.41□□□□□ -1.06
C4orf3-201ENST00000399075 IGSF10Q6WRI0 2623 aa8.41□□□□□ -1.06
C4orf3-201ENST00000399075 FLNCQ14315 2725 aa8.41□□□□□ -1.06
C4orf3-201ENST00000399075 A8MTW9 85 aa8.41□□□□□ -1.06
C4orf3-201ENST00000399075 ZNF56Q15929 161 aa8.41□□□□□ -1.06
C4orf3-201ENST00000399075 ZNF876PQ49A33 203 aa8.41□□□□□ -1.06
C4orf3-201ENST00000399075 GAGE13Q4V321 117 aa8.41□□□□□ -1.06
C4orf3-201ENST00000399075 EDA2RQ9HAV5 297 aa8.41□□□□□ -1.06
C4orf3-201ENST00000399075 IGKV3-20P01619 116 aa8.4□□□□□ -1.06
C4orf3-201ENST00000399075 NDUFV3P56181 108 aaKnown RBP8.4□□□□□ -1.06
C4orf3-201ENST00000399075 RPL39P62891 51 aaKnown RBP8.4□□□□□ -1.06
C4orf3-201ENST00000399075 FOXI1Q12951 378 aa8.4□□□□□ -1.06
C4orf3-201ENST00000399075 FAM74A4Q5TZK3 123 aa8.4□□□□□ -1.06
C4orf3-201ENST00000399075 AGRNO00468 2067 aa8.4□□□□□ -1.06
C4orf3-201ENST00000399075 TRAV2A0A0B4J234 112 aa8.4□□□□□ -1.06
C4orf3-201ENST00000399075 LINC00694P0DN24 101 aa8.4□□□□□ -1.06
C4orf3-201ENST00000399075 CSPG4Q6UVK1 2322 aa8.4□□□□□ -1.07
C4orf3-201ENST00000399075 IGHV4-31P0DP07 118 aa8.4□□□□□ -1.07
C4orf3-201ENST00000399075 TTC32Q5I0X7 151 aa8.4□□□□□ -1.07
C4orf3-201ENST00000399075 Q8N2B8 174 aa8.4□□□□□ -1.07
C4orf3-201ENST00000399075 NFE4Q86UQ8 179 aa8.39□□□□□ -1.07
C4orf3-201ENST00000399075 CELSR2Q9HCU4 2923 aa8.39□□□□□ -1.07
C4orf3-201ENST00000399075 F5H768 121 aa8.39□□□□□ -1.07
C4orf3-201ENST00000399075 SCGB1D4Q6XE38 83 aa8.39□□□□□ -1.07
C4orf3-201ENST00000399075 UBE2D1P51668 147 aa8.38□□□□□ -1.07
C4orf3-201ENST00000399075 PLEKHB2Q96CS7 222 aa8.38□□□□□ -1.07
C4orf3-201ENST00000399075 I3L3M4 83 aa8.37□□□□□ -1.07
C4orf3-201ENST00000399075 HOXA3O43365 443 aaPredicted RBP8.37□□□□□ -1.07
C4orf3-201ENST00000399075 PIK3CD-AS1Q5SR53 167 aa8.37□□□□□ -1.07
C4orf3-201ENST00000399075 A0A0J9YY99 117 aa8.37□□□□□ -1.07
C4orf3-201ENST00000399075 FAM19A5Q7Z5A7 132 aaPredicted RBP8.37□□□□□ -1.07
C4orf3-201ENST00000399075 C20orf203Q8NBC4 194 aa8.37□□□□□ -1.07
C4orf3-201ENST00000399075 MAPK1IP1LQ8NDC0 245 aa8.37□□□□□ -1.07
C4orf3-201ENST00000399075 ZNRF2Q8NHG8 242 aa8.37□□□□□ -1.07
C4orf3-201ENST00000399075 GAGE2BQ13066 116 aa8.37□□□□□ -1.07
C4orf3-201ENST00000399075 GAGE2EQ4V326 116 aa8.37□□□□□ -1.07
C4orf3-201ENST00000399075 SFTA2Q6UW10 78 aa8.37□□□□□ -1.07
C4orf3-201ENST00000399075 DUX5Q96PT3 197 aa8.37□□□□□ -1.07
C4orf3-201ENST00000399075 BEX4Q9NWD9 120 aaPredicted RBP8.37□□□□□ -1.07
C4orf3-201ENST00000399075 GAGE2DQ9UEU5 116 aa8.37□□□□□ -1.07
C4orf3-201ENST00000399075 P0DMU3 169 aa8.36□□□□□ -1.07
C4orf3-201ENST00000399075 FAM231AP0DMU4 169 aa8.36□□□□□ -1.07
C4orf3-201ENST00000399075 FAM231CP0DMU5 169 aa8.36□□□□□ -1.07
C4orf3-201ENST00000399075 SRSF9Q13242 221 aaKnown RBP eCLIP8.36□□□□□ -1.07
C4orf3-201ENST00000399075 RBMY1A1P0DJD3 496 aaKnown RBP8.36□□□□□ -1.07
C4orf3-201ENST00000399075 RBMY1CP0DJD4 496 aa8.36□□□□□ -1.07
C4orf3-201ENST00000399075 EMP1P54849 157 aa8.36□□□□□ -1.07
C4orf3-201ENST00000399075 RBMY1FQ15415 496 aaKnown RBP8.36□□□□□ -1.07
C4orf3-201ENST00000399075 LRRC75A-AS1Q8N1F1 130 aa8.36□□□□□ -1.07
C4orf3-201ENST00000399075 KLHL30-AS1Q8NEE0 82 aa8.36□□□□□ -1.07
C4orf3-201ENST00000399075 CR1P17927 2039 aa8.35□□□□□ -1.07
C4orf3-201ENST00000399075 ANKRD17O75179 2603 aaKnown RBP8.35□□□□□ -1.07
C4orf3-201ENST00000399075 WIPF1O43516 503 aa8.35□□□□□ -1.07
C4orf3-201ENST00000399075 TMEM170BQ5T4T1 132 aa8.35□□□□□ -1.07
C4orf3-201ENST00000399075 AMELXQ99217 191 aa8.35□□□□□ -1.07
C4orf3-201ENST00000399075 H3BMM0 161 aa8.35□□□□□ -1.07
C4orf3-201ENST00000399075 SLC25A29Q8N8R3 303 aa8.35□□□□□ -1.07
C4orf3-201ENST00000399075 PEMTQ9UBM1 199 aa8.35□□□□□ -1.07
C4orf3-201ENST00000399075 PRRC2AP48634 2157 aaKnown RBP8.35□□□□□ -1.07
C4orf3-201ENST00000399075 TRAV4A0A0B4J268 109 aa8.34□□□□□ -1.07
C4orf3-201ENST00000399075 J3QQQ9 107 aa8.34□□□□□ -1.07
C4orf3-201ENST00000399075 IFITM1P13164 125 aa8.34□□□□□ -1.07
C4orf3-201ENST00000399075 SLURP1P55000 103 aa8.34□□□□□ -1.07
C4orf3-201ENST00000399075 TSPEAR-AS2P59090 65 aa8.34□□□□□ -1.07
C4orf3-201ENST00000399075 C4orf3Q8WVX3 66 aa8.34□□□□□ -1.07
C4orf3-201ENST00000399075 PYGO1Q9Y3Y4 419 aa8.34□□□□□ -1.07
C4orf3-201ENST00000399075 KNCNA6PVL3 124 aa8.34□□□□□ -1.07
C4orf3-201ENST00000399075 DEFB131AP59861 70 aa8.34□□□□□ -1.07
C4orf3-201ENST00000399075 DEFB104AQ8WTQ1 72 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms