RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 OR11H12B2RN74 326 aa3.79□□□□□ -1.8
SMAD4-202ENST00000398417 OR11H1Q8NG94 326 aa3.79□□□□□ -1.8
SMAD4-202ENST00000398417 OR11H2Q8NH07 326 aa3.79□□□□□ -1.8
SMAD4-202ENST00000398417 LGALS1P09382 135 aaKnown RBP3.79□□□□□ -1.8
SMAD4-202ENST00000398417 C16orf54Q6UWD8 224 aa3.79□□□□□ -1.8
SMAD4-202ENST00000398417 Q8N6K4 173 aa3.79□□□□□ -1.8
SMAD4-202ENST00000398417 MRPL35Q9NZE8 188 aaKnown RBP3.79□□□□□ -1.8
SMAD4-202ENST00000398417 TRAV25A0A0B4J276 109 aa3.79□□□□□ -1.8
SMAD4-202ENST00000398417 K7ERJ3 54 aa3.79□□□□□ -1.8
SMAD4-202ENST00000398417 CD7P09564 240 aa3.79□□□□□ -1.8
SMAD4-202ENST00000398417 PSMG4Q5JS54 123 aa3.79□□□□□ -1.8
SMAD4-202ENST00000398417 KLK9Q9UKQ9 250 aa3.79□□□□□ -1.8
SMAD4-202ENST00000398417 A0A0G2JLM5 398 aa3.78□□□□□ -1.8
SMAD4-202ENST00000398417 A0A1W2PPR1 153 aa3.78□□□□□ -1.8
SMAD4-202ENST00000398417 SAP30O75446 220 aa3.78□□□□□ -1.8
SMAD4-202ENST00000398417 ODF1Q14990 250 aa3.78□□□□□ -1.8
SMAD4-202ENST00000398417 C1orf122Q6ZSJ8 110 aa3.78□□□□□ -1.8
SMAD4-202ENST00000398417 RNF185Q96GF1 192 aa3.78□□□□□ -1.8
SMAD4-202ENST00000398417 TRAV12-2A0A075B6T6 113 aa3.78□□□□□ -1.8
SMAD4-202ENST00000398417 PIP4P2Q8N4L2 257 aa3.78□□□□□ -1.8
SMAD4-202ENST00000398417 INSP01308 110 aa3.78□□□□□ -1.8
SMAD4-202ENST00000398417 INAFM2P0DMQ5 153 aa3.78□□□□□ -1.8
SMAD4-202ENST00000398417 ZNF493Q6ZR52 646 aa3.78□□□□□ -1.8
SMAD4-202ENST00000398417 NRGNQ92686 78 aa3.78□□□□□ -1.8
SMAD4-202ENST00000398417 TRBV7-1A0A0A6YYK4 115 aa3.78□□□□□ -1.8
SMAD4-202ENST00000398417 LMO4P61968 165 aa3.78□□□□□ -1.8
SMAD4-202ENST00000398417 SAMD5Q5TGI4 173 aa3.78□□□□□ -1.8
SMAD4-202ENST00000398417 UNQ9165/PRO28630Q6UXU0 137 aa3.78□□□□□ -1.8
SMAD4-202ENST00000398417 COL4A2P08572 1712 aa3.78□□□□□ -1.8
SMAD4-202ENST00000398417 F8W735 103 aaPredicted RBP3.78□□□□□ -1.8
SMAD4-202ENST00000398417 FAM223BA6NKX1 122 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 BLCAPP62952 87 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 HIGD2BQ4VC39 106 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 FAM223AQ8IWN6 122 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 ZZEF1O43149 2961 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 TRGV4A0A0C4DH28 118 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 C9orf118A6NHY6 69 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 K7EP34 96 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 LINC01554Q52M75 96 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 PRR9Q5T870 116 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 MYO18BQ8IUG5 2567 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 B5MCH6 92 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 ZNF479Q96JC4 524 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 PLA2G2DQ9UNK4 145 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 BDP1A6H8Y1 2624 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 TMEM89A2RUT3 159 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 EBI3Q14213 229 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 C2orf66Q6UXQ4 117 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 CUBNO60494 3623 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 IGHV4-30-2A0A087WSY4 118 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 A0A096LNJ9 63 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 A8MWV9 139 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 IFITM1P13164 125 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 RPL39LQ96EH5 51 aaKnown RBP3.77□□□□□ -1.81
SMAD4-202ENST00000398417 SMPXQ9UHP9 88 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 TRAV2A0A0B4J234 112 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 FBXL19-AS1Q494R0 122 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 SPINT4Q6UDR6 99 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 C2CD3Q4AC94 2353 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 JPT2Q9H910 190 aa3.77□□□□□ -1.81
SMAD4-202ENST00000398417 TLN1Q9Y490 2541 aaKnown RBP3.76□□□□□ -1.81
SMAD4-202ENST00000398417 C5orf56Q8N8D9 126 aa3.76□□□□□ -1.81
SMAD4-202ENST00000398417 NDUFA4O00483 81 aa3.76□□□□□ -1.81
SMAD4-202ENST00000398417 DEFB112Q30KQ8 113 aa3.76□□□□□ -1.81
SMAD4-202ENST00000398417 MPLKIPQ8TAP9 179 aa3.76□□□□□ -1.81
SMAD4-202ENST00000398417 ZNF625Q96I27 306 aaPredicted RBP3.76□□□□□ -1.81
SMAD4-202ENST00000398417 LINC00158P58513 81 aa3.76□□□□□ -1.81
SMAD4-202ENST00000398417 IGKV2D-26A0A0A0MRZ7 120 aa3.76□□□□□ -1.81
SMAD4-202ENST00000398417 ADARB2-AS1A8MUL3 147 aa3.76□□□□□ -1.81
SMAD4-202ENST00000398417 F8W1H4 67 aa3.76□□□□□ -1.81
SMAD4-202ENST00000398417 A0A087WX48 190 aa3.76□□□□□ -1.81
SMAD4-202ENST00000398417 FXYD2P54710 66 aa3.76□□□□□ -1.81
SMAD4-202ENST00000398417 C10orf99Q6UWK7 81 aa3.76□□□□□ -1.81
SMAD4-202ENST00000398417 TMEM243Q9BU79 118 aa3.76□□□□□ -1.81
SMAD4-202ENST00000398417 IGHV7-4-1A0A0J9YVY3 117 aa3.76□□□□□ -1.81
SMAD4-202ENST00000398417 Q6ZS46 218 aa3.76□□□□□ -1.81
SMAD4-202ENST00000398417 MAPKAPK5-AS1Q8N8E1 139 aa3.76□□□□□ -1.81
SMAD4-202ENST00000398417 TP53TG1Q9Y2A0 90 aa3.76□□□□□ -1.81
SMAD4-202ENST00000398417 U3KQK5 164 aa3.76□□□□□ -1.81
SMAD4-202ENST00000398417 IGHV3-53P01767 116 aa3.75□□□□□ -1.81
SMAD4-202ENST00000398417 PRB2P02812 416 aaPredicted RBP3.75□□□□□ -1.81
SMAD4-202ENST00000398417 DAND5Q8N907 189 aa3.75□□□□□ -1.81
SMAD4-202ENST00000398417 C10orf105Q8TEF2 133 aa3.75□□□□□ -1.81
SMAD4-202ENST00000398417 SMIM2Q9BVW6 85 aa3.75□□□□□ -1.81
SMAD4-202ENST00000398417 ZFHX2Q9C0A1 2572 aaPredicted RBP3.75□□□□□ -1.81
SMAD4-202ENST00000398417 TIMM17BO60830 172 aa3.75□□□□□ -1.81
SMAD4-202ENST00000398417 IGHV4-59P01825 116 aa3.75□□□□□ -1.81
SMAD4-202ENST00000398417 HLA-DRB4P13762 266 aa3.75□□□□□ -1.81
SMAD4-202ENST00000398417 SH2D6Q7Z4S9 175 aa3.75□□□□□ -1.81
SMAD4-202ENST00000398417 TMEM190Q8WZ59 177 aa3.75□□□□□ -1.81
SMAD4-202ENST00000398417 PRADC1Q9BSG0 188 aa3.75□□□□□ -1.81
SMAD4-202ENST00000398417 CSDC2Q9Y534 153 aaKnown RBP3.75□□□□□ -1.81
SMAD4-202ENST00000398417 HLA-DRB4X5D2U9 266 aa3.75□□□□□ -1.81
SMAD4-202ENST00000398417 MSMBP08118 114 aa3.75□□□□□ -1.81
SMAD4-202ENST00000398417 IGLL5B9A064 214 aa3.75□□□□□ -1.81
SMAD4-202ENST00000398417 IGHG4P01861 327 aa3.75□□□□□ -1.81
SMAD4-202ENST00000398417 SPINK8P0C7L1 97 aa3.75□□□□□ -1.81
SMAD4-202ENST00000398417 TRAV13-1A0A0B4J241 112 aa3.75□□□□□ -1.81
SMAD4-202ENST00000398417 PRSS29PA6NIE9 313 aa3.75□□□□□ -1.81
SMAD4-202ENST00000398417 ZNF876PQ49A33 203 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms