RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 HHLA3Q9XRX5 114 aa11.82□□□□□ -0.52
SNX6-202ENST00000396526 GTSCR1Q86UQ5 136 aa11.82□□□□□ -0.52
SNX6-202ENST00000396526 NDUFA11Q86Y39 141 aa11.82□□□□□ -0.52
SNX6-202ENST00000396526 SETD2Q9BYW2 2564 aaPredicted RBP11.82□□□□□ -0.52
SNX6-202ENST00000396526 IGHV3OR16-12A0A075B7B8 117 aa11.82□□□□□ -0.52
SNX6-202ENST00000396526 LINC00469Q8N7U9 141 aa11.82□□□□□ -0.52
SNX6-202ENST00000396526 NEXN-AS1Q8NBZ9 246 aa11.81□□□□□ -0.52
SNX6-202ENST00000396526 FAM110AQ9BQ89 295 aa11.81□□□□□ -0.52
SNX6-202ENST00000396526 BVES-AS1Q5T3Y7 98 aa11.81□□□□□ -0.52
SNX6-202ENST00000396526 TIMM17AQ99595 171 aa11.81□□□□□ -0.52
SNX6-202ENST00000396526 RIPPLY3P57055 190 aa11.81□□□□□ -0.52
SNX6-202ENST00000396526 BAALCQ8WXS3 180 aa11.81□□□□□ -0.52
SNX6-202ENST00000396526 C1QTNF4Q9BXJ3 329 aa11.81□□□□□ -0.52
SNX6-202ENST00000396526 IGLV1-51P01701 117 aa11.8□□□□□ -0.52
SNX6-202ENST00000396526 PDZD2O15018 2839 aa11.8□□□□□ -0.52
SNX6-202ENST00000396526 SEC11AP67812 179 aa11.8□□□□□ -0.52
SNX6-202ENST00000396526 HSD52Q0P140 79 aa11.8□□□□□ -0.52
SNX6-202ENST00000396526 EDA2RQ9HAV5 297 aa11.8□□□□□ -0.52
SNX6-202ENST00000396526 PRSS29PA6NIE9 313 aa11.79□□□□□ -0.52
SNX6-202ENST00000396526 FGF6P10767 208 aa11.79□□□□□ -0.52
SNX6-202ENST00000396526 PMVKQ15126 192 aa11.79□□□□□ -0.52
SNX6-202ENST00000396526 IGHV3-73A0A0B4J1V6 119 aa11.79□□□□□ -0.52
SNX6-202ENST00000396526 PCP2Q8IVA1 136 aa11.79□□□□□ -0.52
SNX6-202ENST00000396526 OR11H2Q8NH07 326 aa11.79□□□□□ -0.52
SNX6-202ENST00000396526 TP73-AS1Q9UF72 201 aa11.79□□□□□ -0.52
SNX6-202ENST00000396526 A6NDN8 102 aa11.78□□□□□ -0.52
SNX6-202ENST00000396526 HERVK_113P61574 105 aa11.78□□□□□ -0.52
SNX6-202ENST00000396526 C2orf91Q6ZV80 131 aa11.78□□□□□ -0.52
SNX6-202ENST00000396526 TRAV8-6A0A0B4J262 113 aa11.76□□□□□ -0.53
SNX6-202ENST00000396526 DNAJC30Q96LL9 226 aa11.76□□□□□ -0.53
SNX6-202ENST00000396526 HECTD1Q9ULT8 2610 aa11.76□□□□□ -0.53
SNX6-202ENST00000396526 IGIPA6NJ69 53 aa11.76□□□□□ -0.53
SNX6-202ENST00000396526 BEAN1Q3B7T3 259 aa11.76□□□□□ -0.53
SNX6-202ENST00000396526 C11orf72Q8NBR9 251 aa11.76□□□□□ -0.53
SNX6-202ENST00000396526 ORAOV1Q8WV07 137 aa11.76□□□□□ -0.53
SNX6-202ENST00000396526 MRPL16Q9NX20 251 aaKnown RBP11.76□□□□□ -0.53
SNX6-202ENST00000396526 HIGD1BQ9P298 99 aa11.76□□□□□ -0.53
SNX6-202ENST00000396526 FOSL1P15407 271 aa11.76□□□□□ -0.53
SNX6-202ENST00000396526 CFAP126Q5VTH2 177 aa11.76□□□□□ -0.53
SNX6-202ENST00000396526 MORN3Q6PF18 240 aaPredicted RBP11.76□□□□□ -0.53
SNX6-202ENST00000396526 RPL39P62891 51 aaKnown RBP11.75□□□□□ -0.53
SNX6-202ENST00000396526 OR4C5Q8NGB2 326 aa11.75□□□□□ -0.53
SNX6-202ENST00000396526 DEFB104AQ8WTQ1 72 aa11.75□□□□□ -0.53
SNX6-202ENST00000396526 COX11Q9Y6N1 276 aa11.75□□□□□ -0.53
SNX6-202ENST00000396526 INAFM1C9JVW0 142 aa11.75□□□□□ -0.53
SNX6-202ENST00000396526 GAGE1Q13065 139 aa11.75□□□□□ -0.53
SNX6-202ENST00000396526 C20orf203Q8NBC4 194 aa11.75□□□□□ -0.53
SNX6-202ENST00000396526 ADARB2-AS1A8MUL3 147 aa11.75□□□□□ -0.53
SNX6-202ENST00000396526 PRM2P04554 102 aa11.75□□□□□ -0.53
SNX6-202ENST00000396526 C1orf158Q8N1D5 194 aa11.75□□□□□ -0.53
SNX6-202ENST00000396526 TMEM263Q8WUH6 116 aaKnown RBP11.75□□□□□ -0.53
SNX6-202ENST00000396526 TRGV1A0A0A0MS02 117 aa11.74□□□□□ -0.53
SNX6-202ENST00000396526 AZU1P20160 251 aa11.74□□□□□ -0.53
SNX6-202ENST00000396526 NOTCH3Q9UM47 2321 aa11.74□□□□□ -0.53
SNX6-202ENST00000396526 IGKV2D-26A0A0A0MRZ7 120 aa11.74□□□□□ -0.53
SNX6-202ENST00000396526 RS1O15537 224 aa11.74□□□□□ -0.53
SNX6-202ENST00000396526 IGHV3-53P01767 116 aa11.74□□□□□ -0.53
SNX6-202ENST00000396526 TSHBP01222 138 aa11.73□□□□□ -0.53
SNX6-202ENST00000396526 VCX2Q9H322 139 aa11.73□□□□□ -0.53
SNX6-202ENST00000396526 CST9LQ9H4G1 147 aa11.73□□□□□ -0.53
SNX6-202ENST00000396526 RPL35AP18077 110 aaKnown RBP11.73□□□□□ -0.53
SNX6-202ENST00000396526 INSL3P51460 131 aa11.71□□□□□ -0.53
SNX6-202ENST00000396526 COTL1Q14019 142 aa11.71□□□□□ -0.53
SNX6-202ENST00000396526 VAMP3Q15836 100 aa11.71□□□□□ -0.53
SNX6-202ENST00000396526 TRBV25-1A0A075B6N4 114 aa11.71□□□□□ -0.53
SNX6-202ENST00000396526 RRN3P1Q2M238 152 aa11.71□□□□□ -0.53
SNX6-202ENST00000396526 CHAC1Q9BUX1 264 aa11.71□□□□□ -0.53
SNX6-202ENST00000396526 E9PLD3 99 aa11.71□□□□□ -0.54
SNX6-202ENST00000396526 C16orf74Q96GX8 76 aa11.71□□□□□ -0.54
SNX6-202ENST00000396526 PTTG1IPP53801 180 aa11.7□□□□□ -0.54
SNX6-202ENST00000396526 TMEM170BQ5T4T1 132 aa11.7□□□□□ -0.54
SNX6-202ENST00000396526 UFSP1Q6NVU6 142 aa11.7□□□□□ -0.54
SNX6-202ENST00000396526 GCSHP23434 173 aa11.7□□□□□ -0.54
SNX6-202ENST00000396526 RNASE8Q8TDE3 154 aaKnown RBP11.7□□□□□ -0.54
SNX6-202ENST00000396526 P0DMU3 169 aa11.69□□□□□ -0.54
SNX6-202ENST00000396526 FAM231AP0DMU4 169 aa11.69□□□□□ -0.54
SNX6-202ENST00000396526 FAM231CP0DMU5 169 aa11.69□□□□□ -0.54
SNX6-202ENST00000396526 NF1P21359 2839 aa11.69□□□□□ -0.54
SNX6-202ENST00000396526 PRADC1Q9BSG0 188 aa11.69□□□□□ -0.54
SNX6-202ENST00000396526 TTTY13Q9BZ97 58 aa11.69□□□□□ -0.54
SNX6-202ENST00000396526 PYGO1Q9Y3Y4 419 aa11.69□□□□□ -0.54
SNX6-202ENST00000396526 MYMXA0A1B0GTQ4 84 aa11.68□□□□□ -0.54
SNX6-202ENST00000396526 RPL36AP83881 106 aaKnown RBP11.68□□□□□ -0.54
SNX6-202ENST00000396526 TAL2Q16559 108 aa11.68□□□□□ -0.54
SNX6-202ENST00000396526 LINC00482Q8N8I6 264 aa11.68□□□□□ -0.54
SNX6-202ENST00000396526 RPL36ALQ969Q0 106 aaKnown RBP11.68□□□□□ -0.54
SNX6-202ENST00000396526 CRYBA4P53673 196 aa11.68□□□□□ -0.54
SNX6-202ENST00000396526 C11orf86A6NJI1 115 aa11.68□□□□□ -0.54
SNX6-202ENST00000396526 CIDEAO60543 219 aa11.68□□□□□ -0.54
SNX6-202ENST00000396526 C9orf66Q5T8R8 295 aa11.68□□□□□ -0.54
SNX6-202ENST00000396526 TRBV10-1A0A0K0K1A3 114 aa11.67□□□□□ -0.54
SNX6-202ENST00000396526 TAX1BP3O14907 124 aa11.67□□□□□ -0.54
SNX6-202ENST00000396526 NPSP0C0P6 89 aa11.67□□□□□ -0.54
SNX6-202ENST00000396526 DAZ2Q13117 558 aaKnown RBP11.67□□□□□ -0.54
SNX6-202ENST00000396526 SCGB1D4Q6XE38 83 aa11.67□□□□□ -0.54
SNX6-202ENST00000396526 TRAV4A0A0B4J268 109 aa11.67□□□□□ -0.54
SNX6-202ENST00000396526 TRGV2A0A075B6R0 118 aa11.67□□□□□ -0.54
SNX6-202ENST00000396526 SMAGPQ0VAQ4 97 aa11.67□□□□□ -0.54
SNX6-202ENST00000396526 DGAT2L7PQ6IED9 249 aa11.67□□□□□ -0.54
SNX6-202ENST00000396526 HIST1H4GQ99525 98 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms