RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 USP17L23D6RBM5 183 aa11.3□□□□□ -0.6
EXOSC3-202ENST00000396521 PEX7O00628 323 aa11.3□□□□□ -0.6
EXOSC3-202ENST00000396521 IFNA1P01562 189 aa11.3□□□□□ -0.6
EXOSC3-202ENST00000396521 RAB4BP61018 213 aa11.3□□□□□ -0.6
EXOSC3-202ENST00000396521 Q86TA4 180 aa11.3□□□□□ -0.6
EXOSC3-202ENST00000396521 DAZAP1Q96EP5 407 aaKnown RBP11.3□□□□□ -0.6
EXOSC3-202ENST00000396521 ZC2HC1AQ96GY0 325 aa11.3□□□□□ -0.6
EXOSC3-202ENST00000396521 MANBALQ9NQG1 85 aa11.3□□□□□ -0.6
EXOSC3-202ENST00000396521 GNG13Q9P2W3 67 aa11.3□□□□□ -0.6
EXOSC3-202ENST00000396521 TRAV1-1A0A0B4J248 108 aa11.29□□□□□ -0.6
EXOSC3-202ENST00000396521 M0R036 132 aa11.29□□□□□ -0.6
EXOSC3-202ENST00000396521 M0R381 172 aa11.29□□□□□ -0.6
EXOSC3-202ENST00000396521 PAGE4O60829 102 aa11.29□□□□□ -0.6
EXOSC3-202ENST00000396521 SH2D1AO60880 128 aa11.29□□□□□ -0.6
EXOSC3-202ENST00000396521 ANGP03950 147 aaKnown RBP11.29□□□□□ -0.6
EXOSC3-202ENST00000396521 CRIP1P50238 77 aa11.29□□□□□ -0.6
EXOSC3-202ENST00000396521 BLOC1S1P78537 153 aa11.29□□□□□ -0.6
EXOSC3-202ENST00000396521 C15orf54Q8N8G6 183 aa11.29□□□□□ -0.6
EXOSC3-202ENST00000396521 CLRN3Q8NCR9 226 aa11.29□□□□□ -0.6
EXOSC3-202ENST00000396521 FMC1Q96HJ9 113 aa11.29□□□□□ -0.6
EXOSC3-202ENST00000396521 TCEAL7Q9BRU2 100 aa11.29□□□□□ -0.6
EXOSC3-202ENST00000396521 LINC01559Q495D7 138 aa11.28□□□□□ -0.6
EXOSC3-202ENST00000396521 GRIFINA4D1Z8 144 aa11.27□□□□□ -0.61
EXOSC3-202ENST00000396521 PRSS1P07477 247 aa11.27□□□□□ -0.61
EXOSC3-202ENST00000396521 ZNF674Q2M3X9 581 aa11.27□□□□□ -0.61
EXOSC3-202ENST00000396521 CHCHD5Q9BSY4 110 aa11.27□□□□□ -0.61
EXOSC3-202ENST00000396521 TRBV6-1A0A0K0K1D8 114 aa11.26□□□□□ -0.61
EXOSC3-202ENST00000396521 HLA-DQA1P01909 254 aa11.26□□□□□ -0.61
EXOSC3-202ENST00000396521 AKR1C3P42330 323 aa11.26□□□□□ -0.61
EXOSC3-202ENST00000396521 UBE2G1P62253 170 aa11.26□□□□□ -0.61
EXOSC3-202ENST00000396521 MPV17L2Q567V2 206 aa11.26□□□□□ -0.61
EXOSC3-202ENST00000396521 PRR34Q9NV39 138 aa11.26□□□□□ -0.61
EXOSC3-202ENST00000396521 HNRNPA3P51991 378 aaKnown RBP11.25□□□□□ -0.61
EXOSC3-202ENST00000396521 PRR27Q6MZM9 219 aa11.25□□□□□ -0.61
EXOSC3-202ENST00000396521 TEX261Q6UWH6 196 aa11.25□□□□□ -0.61
EXOSC3-202ENST00000396521 SDIM1Q6ZPB5 146 aa11.25□□□□□ -0.61
EXOSC3-202ENST00000396521 RNF185Q96GF1 192 aa11.25□□□□□ -0.61
EXOSC3-202ENST00000396521 MT1HL1P0DM35 61 aa11.24□□□□□ -0.61
EXOSC3-202ENST00000396521 BCL2P10415 239 aa11.24□□□□□ -0.61
EXOSC3-202ENST00000396521 CCL20P78556 96 aa11.24□□□□□ -0.61
EXOSC3-202ENST00000396521 NEXN-AS1Q8NBZ9 246 aa11.24□□□□□ -0.61
EXOSC3-202ENST00000396521 CXCL1P09341 107 aa11.23□□□□□ -0.61
EXOSC3-202ENST00000396521 TAGLN2P37802 199 aaKnown RBP11.23□□□□□ -0.61
EXOSC3-202ENST00000396521 CNBPP62633 177 aaKnown RBP11.23□□□□□ -0.61
EXOSC3-202ENST00000396521 ZNF56Q15929 161 aa11.23□□□□□ -0.61
EXOSC3-202ENST00000396521 VAX2Q9UIW0 290 aa11.23□□□□□ -0.61
EXOSC3-202ENST00000396521 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.23□□□□□ -0.61
EXOSC3-202ENST00000396521 SCO2A0A1W2PP80 73 aa11.22□□□□□ -0.61
EXOSC3-202ENST00000396521 LTAP01374 205 aa11.22□□□□□ -0.61
EXOSC3-202ENST00000396521 MEF2BQ02080 365 aaPredicted RBP11.22□□□□□ -0.61
EXOSC3-202ENST00000396521 CIRBPQ14011 172 aaKnown RBP11.22□□□□□ -0.61
EXOSC3-202ENST00000396521 TMSB15BA0A087X1C1 80 aa11.21□□□□□ -0.61
EXOSC3-202ENST00000396521 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.21□□□□□ -0.61
EXOSC3-202ENST00000396521 S100A9P06702 114 aaKnown RBP11.21□□□□□ -0.61
EXOSC3-202ENST00000396521 TRBV25-1A0A075B6N4 114 aa11.2□□□□□ -0.62
EXOSC3-202ENST00000396521 TRAV8-4A0A0B4J246 113 aa11.2□□□□□ -0.62
EXOSC3-202ENST00000396521 P01737 135 aa11.2□□□□□ -0.62
EXOSC3-202ENST00000396521 GZMBP10144 247 aa11.2□□□□□ -0.62
EXOSC3-202ENST00000396521 RBX1P62877 108 aa11.2□□□□□ -0.62
EXOSC3-202ENST00000396521 KRTAP26-1Q6PEX3 210 aa11.2□□□□□ -0.62
EXOSC3-202ENST00000396521 PDE6DO43924 150 aa11.19□□□□□ -0.62
EXOSC3-202ENST00000396521 LINC00269Q8N2A0 174 aa11.19□□□□□ -0.62
EXOSC3-202ENST00000396521 DPH3Q96FX2 82 aa11.19□□□□□ -0.62
EXOSC3-202ENST00000396521 SSBP4Q9BWG4 385 aaPredicted RBP11.19□□□□□ -0.62
EXOSC3-202ENST00000396521 AP5S1Q9NUS5 200 aa11.19□□□□□ -0.62
EXOSC3-202ENST00000396521 IGHV3-64A0A075B6Q5 118 aa11.18□□□□□ -0.62
EXOSC3-202ENST00000396521 F5H697 171 aa11.18□□□□□ -0.62
EXOSC3-202ENST00000396521 OR5AL1P0C617 328 aa11.18□□□□□ -0.62
EXOSC3-202ENST00000396521 RAB14P61106 215 aa11.18□□□□□ -0.62
EXOSC3-202ENST00000396521 SPANXN1Q5VSR9 72 aa11.18□□□□□ -0.62
EXOSC3-202ENST00000396521 DERL1Q9BUN8 251 aa11.18□□□□□ -0.62
EXOSC3-202ENST00000396521 DPH3P1Q9H4G8 78 aa11.18□□□□□ -0.62
EXOSC3-202ENST00000396521 SMIM17P0DL12 118 aa11.17□□□□□ -0.62
EXOSC3-202ENST00000396521 IQCJQ1A5X6 159 aa11.17□□□□□ -0.62
EXOSC3-202ENST00000396521 NTM-AS1Q6ZSK4 140 aa11.17□□□□□ -0.62
EXOSC3-202ENST00000396521 OR10AG1Q8NH19 301 aa11.17□□□□□ -0.62
EXOSC3-202ENST00000396521 LYPD6BQ8NI32 183 aa11.17□□□□□ -0.62
EXOSC3-202ENST00000396521 C11orf52Q96A22 123 aa11.17□□□□□ -0.62
EXOSC3-202ENST00000396521 PKHD1L1Q86WI1 4243 aa11.16□□□□□ -0.62
EXOSC3-202ENST00000396521 IGHV1-24A0A0C4DH33 117 aa11.16□□□□□ -0.62
EXOSC3-202ENST00000396521 hDV102S1A0JD36 115 aa11.16□□□□□ -0.62
EXOSC3-202ENST00000396521 PANO1I0J062 215 aa11.16□□□□□ -0.62
EXOSC3-202ENST00000396521 SNAI2O43623 268 aa11.16□□□□□ -0.62
EXOSC3-202ENST00000396521 REG3AQ06141 175 aa11.16□□□□□ -0.62
EXOSC3-202ENST00000396521 EIF5A2Q9GZV4 153 aaKnown RBP11.16□□□□□ -0.62
EXOSC3-202ENST00000396521 MED9Q9NWA0 146 aa11.16□□□□□ -0.62
EXOSC3-202ENST00000396521 A0A1B0GUV1 79 aa11.15□□□□□ -0.62
EXOSC3-202ENST00000396521 H7C1H1 209 aa11.15□□□□□ -0.62
EXOSC3-202ENST00000396521 RPL35P42766 123 aaKnown RBP11.15□□□□□ -0.62
EXOSC3-202ENST00000396521 GAGE6Q13070 117 aa11.15□□□□□ -0.62
EXOSC3-202ENST00000396521 C7orf33Q8WU49 177 aa11.14□□□□□ -0.63
EXOSC3-202ENST00000396521 FAM210AQ96ND0 272 aa11.14□□□□□ -0.63
EXOSC3-202ENST00000396521 AP1S3Q96PC3 154 aa11.14□□□□□ -0.63
EXOSC3-202ENST00000396521 A0A087WYN8 130 aa11.13□□□□□ -0.63
EXOSC3-202ENST00000396521 CEBPGP53567 150 aa11.13□□□□□ -0.63
EXOSC3-202ENST00000396521 CENPWQ5EE01 88 aa11.13□□□□□ -0.63
EXOSC3-202ENST00000396521 CLPSL2Q6UWE3 100 aa11.13□□□□□ -0.63
EXOSC3-202ENST00000396521 BAGE2Q86Y30 109 aa11.13□□□□□ -0.63
EXOSC3-202ENST00000396521 GNG4P50150 75 aa11.12□□□□□ -0.63
EXOSC3-202ENST00000396521 CFAP161Q6P656 301 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms