RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 M0R2N4 97 aa13.16□□□□□ -0.3
HOXA9-202ENST00000396345 RASL11AQ6T310 242 aa13.16□□□□□ -0.3
HOXA9-202ENST00000396345 DNAJC30Q96LL9 226 aa13.16□□□□□ -0.3
HOXA9-202ENST00000396345 TNFRSF18Q9Y5U5 241 aa13.16□□□□□ -0.3
HOXA9-202ENST00000396345 A0A1B0GW15 77 aa13.15□□□□□ -0.3
HOXA9-202ENST00000396345 SIVA1O15304 175 aa13.15□□□□□ -0.3
HOXA9-202ENST00000396345 LELP1Q5T871 98 aa13.15□□□□□ -0.3
HOXA9-202ENST00000396345 MRPL54Q6P161 138 aaKnown RBP13.15□□□□□ -0.3
HOXA9-202ENST00000396345 GATD1Q8NB37 220 aa13.15□□□□□ -0.3
HOXA9-202ENST00000396345 CTDSP1Q9GZU7 261 aa13.15□□□□□ -0.3
HOXA9-202ENST00000396345 TRAV26-2A0A0B4J265 109 aa13.14□□□□□ -0.31
HOXA9-202ENST00000396345 CAMPP49913 170 aa13.14□□□□□ -0.31
HOXA9-202ENST00000396345 OR10J3Q5JRS4 329 aa13.14□□□□□ -0.31
HOXA9-202ENST00000396345 NIT2Q9NQR4 276 aa13.14□□□□□ -0.31
HOXA9-202ENST00000396345 BIRC6Q9NR09 4857 aa13.13□□□□□ -0.31
HOXA9-202ENST00000396345 TRAV8-6A0A0B4J262 113 aa13.13□□□□□ -0.31
HOXA9-202ENST00000396345 NBDYA0A0U1RRE5 68 aa13.13□□□□□ -0.31
HOXA9-202ENST00000396345 HBBP68871 147 aa13.13□□□□□ -0.31
HOXA9-202ENST00000396345 WFDC10BQ8IUB3 73 aa13.13□□□□□ -0.31
HOXA9-202ENST00000396345 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.13□□□□□ -0.31
HOXA9-202ENST00000396345 A0A087WWC5 75 aa13.12□□□□□ -0.31
HOXA9-202ENST00000396345 A0A1B0GXF2 115 aa13.12□□□□□ -0.31
HOXA9-202ENST00000396345 S100A8P05109 93 aa13.12□□□□□ -0.31
HOXA9-202ENST00000396345 RAB4AP20338 218 aa13.12□□□□□ -0.31
HOXA9-202ENST00000396345 Q6ZR54 194 aa13.12□□□□□ -0.31
HOXA9-202ENST00000396345 AMN1Q8IY45 258 aa13.12□□□□□ -0.31
HOXA9-202ENST00000396345 CLRN3Q8NCR9 226 aa13.12□□□□□ -0.31
HOXA9-202ENST00000396345 FRZBQ92765 325 aa13.12□□□□□ -0.31
HOXA9-202ENST00000396345 RNF185Q96GF1 192 aa13.12□□□□□ -0.31
HOXA9-202ENST00000396345 IGHV3-38A0A0C4DH36 116 aa13.11□□□□□ -0.31
HOXA9-202ENST00000396345 NDUFA5Q16718 116 aa13.11□□□□□ -0.31
HOXA9-202ENST00000396345 ATP5L2Q7Z4Y8 100 aa13.11□□□□□ -0.31
HOXA9-202ENST00000396345 DAZ4Q86SG3 579 aaKnown RBP13.11□□□□□ -0.31
HOXA9-202ENST00000396345 IMMP2LQ96T52 175 aa13.11□□□□□ -0.31
HOXA9-202ENST00000396345 DAZ3Q9NR90 486 aaKnown RBP13.11□□□□□ -0.31
HOXA9-202ENST00000396345 C7orf77A4D0Y5 90 aa13.1□□□□□ -0.31
HOXA9-202ENST00000396345 APOC3P02656 99 aa13.1□□□□□ -0.31
HOXA9-202ENST00000396345 RHEBQ15382 184 aa13.1□□□□□ -0.31
HOXA9-202ENST00000396345 TTC32Q5I0X7 151 aa13.09□□□□□ -0.31
HOXA9-202ENST00000396345 FAM104BQ5XKR9 115 aa13.09□□□□□ -0.31
HOXA9-202ENST00000396345 SLC7A5P1Q8MH63 180 aa13.09□□□□□ -0.31
HOXA9-202ENST00000396345 RPL39LQ96EH5 51 aaKnown RBP13.09□□□□□ -0.31
HOXA9-202ENST00000396345 MRAP2Q96G30 205 aa13.09□□□□□ -0.31
HOXA9-202ENST00000396345 BTF3L4Q96K17 158 aa13.09□□□□□ -0.31
HOXA9-202ENST00000396345 RPS10P5Q9NQ39 176 aa13.09□□□□□ -0.31
HOXA9-202ENST00000396345 DNAH10OSP0CZ25 163 aa13.08□□□□□ -0.32
HOXA9-202ENST00000396345 KCNIP4Q6PIL6 250 aa13.08□□□□□ -0.32
HOXA9-202ENST00000396345 TMEM242Q9NWH2 141 aa13.08□□□□□ -0.32
HOXA9-202ENST00000396345 GAS8-AS1O95177 125 aa13.07□□□□□ -0.32
HOXA9-202ENST00000396345 MRPL51Q4U2R6 128 aaKnown RBP13.07□□□□□ -0.32
HOXA9-202ENST00000396345 TMEM97Q5BJF2 176 aa13.07□□□□□ -0.32
HOXA9-202ENST00000396345 SVBPQ8N300 66 aa13.07□□□□□ -0.32
HOXA9-202ENST00000396345 KRTAP1-5Q9BYS1 174 aa13.07□□□□□ -0.32
HOXA9-202ENST00000396345 TRAV9-2A0A087WT02 112 aa13.06□□□□□ -0.32
HOXA9-202ENST00000396345 TRBV6-8A0A0A6YYG3 113 aa13.06□□□□□ -0.32
HOXA9-202ENST00000396345 SMKR1H3BMG3 65 aa13.05□□□□□ -0.32
HOXA9-202ENST00000396345 SNAPINO95295 136 aa13.05□□□□□ -0.32
HOXA9-202ENST00000396345 NCR2O95944 276 aa13.05□□□□□ -0.32
HOXA9-202ENST00000396345 S100PP25815 95 aa13.05□□□□□ -0.32
HOXA9-202ENST00000396345 LINC01556Q5JQF7 62 aa13.05□□□□□ -0.32
HOXA9-202ENST00000396345 TRAV9-1A0A075B6T8 112 aa13.04□□□□□ -0.32
HOXA9-202ENST00000396345 TRBV6-5A0A0K0K1A5 114 aa13.04□□□□□ -0.32
HOXA9-202ENST00000396345 K7EP13 123 aa13.04□□□□□ -0.32
HOXA9-202ENST00000396345 C1orf134Q5TEV5 83 aa13.04□□□□□ -0.32
HOXA9-202ENST00000396345 NTM-AS1Q6ZSK4 140 aa13.04□□□□□ -0.32
HOXA9-202ENST00000396345 ST20Q9HBF5 79 aa13.04□□□□□ -0.32
HOXA9-202ENST00000396345 SDHAF1A6NFY7 115 aa13.03□□□□□ -0.32
HOXA9-202ENST00000396345 PPP1R17O96001 155 aa13.03□□□□□ -0.32
HOXA9-202ENST00000396345 IGHV3-30P01768 117 aa13.03□□□□□ -0.32
HOXA9-202ENST00000396345 IGHV3-33P01772 117 aa13.03□□□□□ -0.32
HOXA9-202ENST00000396345 IGHV3-30-3P0DP02 117 aa13.03□□□□□ -0.32
HOXA9-202ENST00000396345 IGHV3-30-5P0DP03 117 aa13.03□□□□□ -0.32
HOXA9-202ENST00000396345 CKS2P33552 79 aa13.03□□□□□ -0.32
HOXA9-202ENST00000396345 RPS10P46783 165 aaKnown RBP13.03□□□□□ -0.32
HOXA9-202ENST00000396345 URGCP-MRPS24S4R325 110 aa13.03□□□□□ -0.32
HOXA9-202ENST00000396345 DNAH10Q8IVF4 4471 aa13.03□□□□□ -0.32
HOXA9-202ENST00000396345 NIT1Q86X76 327 aa13.02□□□□□ -0.33
HOXA9-202ENST00000396345 C6orf223Q8N319 242 aa13.02□□□□□ -0.33
HOXA9-202ENST00000396345 C10orf126Q8N4M7 172 aa13.02□□□□□ -0.33
HOXA9-202ENST00000396345 DNAH2Q9P225 4427 aa13.02□□□□□ -0.33
HOXA9-202ENST00000396345 TRBV25-1A0A075B6N4 114 aa13.01□□□□□ -0.33
HOXA9-202ENST00000396345 IGHV1-24A0A0C4DH33 117 aa13.01□□□□□ -0.33
HOXA9-202ENST00000396345 COTL1Q14019 142 aa13.01□□□□□ -0.33
HOXA9-202ENST00000396345 NRACQ8N912 160 aa13.01□□□□□ -0.33
HOXA9-202ENST00000396345 DEFB104AQ8WTQ1 72 aa13.01□□□□□ -0.33
HOXA9-202ENST00000396345 CHCHD5Q9BSY4 110 aa13.01□□□□□ -0.33
HOXA9-202ENST00000396345 IQCJQ1A5X6 159 aa13□□□□□ -0.33
HOXA9-202ENST00000396345 Q8N3U1 123 aa13□□□□□ -0.33
HOXA9-202ENST00000396345 TMEM70Q9BUB7 260 aa13□□□□□ -0.33
HOXA9-202ENST00000396345 A0A087WX48 190 aa12.99□□□□□ -0.33
HOXA9-202ENST00000396345 D6R8Y8 96 aa12.99□□□□□ -0.33
HOXA9-202ENST00000396345 TMEM262E9PQX1 116 aa12.99□□□□□ -0.33
HOXA9-202ENST00000396345 I3L3M4 83 aa12.99□□□□□ -0.33
HOXA9-202ENST00000396345 PPBPP02775 128 aa12.99□□□□□ -0.33
HOXA9-202ENST00000396345 BTF3P20290 206 aaKnown RBP12.99□□□□□ -0.33
HOXA9-202ENST00000396345 PMCHP20382 165 aa12.99□□□□□ -0.33
HOXA9-202ENST00000396345 FRAS1Q86XX4 4008 aa12.98□□□□□ -0.33
HOXA9-202ENST00000396345 RTL8CO15255 209 aa12.98□□□□□ -0.33
HOXA9-202ENST00000396345 POLR2KP53803 58 aaKnown RBP12.98□□□□□ -0.33
HOXA9-202ENST00000396345 PKIAP61925 76 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms