RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 RNF152Q8N8N0 203 aa13.26□□□□□ -0.29
SREBF1-204ENST00000395756 SMIM2Q9BVW6 85 aa13.26□□□□□ -0.29
SREBF1-204ENST00000395756 IGHV3-73A0A0B4J1V6 119 aa13.25□□□□□ -0.29
SREBF1-204ENST00000395756 C20orf78Q9BR46 151 aa13.25□□□□□ -0.29
SREBF1-204ENST00000395756 FN1P02751 2386 aaKnown RBP13.25□□□□□ -0.29
SREBF1-204ENST00000395756 ANAPC13Q9BS18 74 aa13.25□□□□□ -0.29
SREBF1-204ENST00000395756 SPANXB1Q9NS25 103 aaPredicted RBP13.25□□□□□ -0.29
SREBF1-204ENST00000395756 RPL32P62910 135 aaKnown RBP13.24□□□□□ -0.29
SREBF1-204ENST00000395756 GAGE5Q13069 117 aa13.24□□□□□ -0.29
SREBF1-204ENST00000395756 GAGE6Q13070 117 aa13.24□□□□□ -0.29
SREBF1-204ENST00000395756 C4orf3Q8WVX3 66 aa13.24□□□□□ -0.29
SREBF1-204ENST00000395756 PCP2Q8IVA1 136 aa13.24□□□□□ -0.29
SREBF1-204ENST00000395756 ZNF418Q8TF45 676 aaPredicted RBP13.24□□□□□ -0.29
SREBF1-204ENST00000395756 PEMTQ9UBM1 199 aa13.24□□□□□ -0.29
SREBF1-204ENST00000395756 SETXQ7Z333 2677 aaKnown RBP13.24□□□□□ -0.29
SREBF1-204ENST00000395756 IGHV1OR15-1A0A075B7D0 117 aa13.23□□□□□ -0.29
SREBF1-204ENST00000395756 RBMY1A1P0DJD3 496 aaKnown RBP13.23□□□□□ -0.29
SREBF1-204ENST00000395756 RBMY1CP0DJD4 496 aa13.23□□□□□ -0.29
SREBF1-204ENST00000395756 COX8AP10176 69 aa13.23□□□□□ -0.29
SREBF1-204ENST00000395756 RBMY1FQ15415 496 aaKnown RBP13.23□□□□□ -0.29
SREBF1-204ENST00000395756 IGHV3-16A0A0C4DH30 117 aa13.23□□□□□ -0.29
SREBF1-204ENST00000395756 MT-ATP8P03928 68 aa13.23□□□□□ -0.29
SREBF1-204ENST00000395756 GTSCR1Q86UQ5 136 aa13.23□□□□□ -0.29
SREBF1-204ENST00000395756 CITED2Q99967 270 aaPredicted RBP13.23□□□□□ -0.29
SREBF1-204ENST00000395756 ZNF56Q15929 161 aa13.23□□□□□ -0.29
SREBF1-204ENST00000395756 FOXI2Q6ZQN5 318 aa13.23□□□□□ -0.29
SREBF1-204ENST00000395756 ZNF876PQ49A33 203 aa13.22□□□□□ -0.29
SREBF1-204ENST00000395756 SUMO4Q6EEV6 95 aa13.22□□□□□ -0.29
SREBF1-204ENST00000395756 RAX2Q96IS3 184 aa13.22□□□□□ -0.29
SREBF1-204ENST00000395756 ZNF256Q9Y2P7 627 aaPredicted RBP13.22□□□□□ -0.29
SREBF1-204ENST00000395756 MRPL35Q9NZE8 188 aaKnown RBP13.22□□□□□ -0.29
SREBF1-204ENST00000395756 ERG28Q9UKR5 140 aa13.22□□□□□ -0.29
SREBF1-204ENST00000395756 DUSP14O95147 198 aaKnown RBP13.21□□□□□ -0.29
SREBF1-204ENST00000395756 C2CD3Q4AC94 2353 aa13.21□□□□□ -0.29
SREBF1-204ENST00000395756 IGHV3OR16-12A0A075B7B8 117 aa13.21□□□□□ -0.29
SREBF1-204ENST00000395756 KRTAP1-1Q07627 177 aa13.21□□□□□ -0.29
SREBF1-204ENST00000395756 AMTNQ6UX39 209 aa13.21□□□□□ -0.29
SREBF1-204ENST00000395756 K7EMI3 77 aa13.21□□□□□ -0.3
SREBF1-204ENST00000395756 LINC00315P59091 139 aa13.21□□□□□ -0.3
SREBF1-204ENST00000395756 SCGB3A1Q96QR1 104 aa13.21□□□□□ -0.3
SREBF1-204ENST00000395756 ANK3Q12955 4377 aaKnown RBP13.2□□□□□ -0.3
SREBF1-204ENST00000395756 K7ERJ3 54 aa13.2□□□□□ -0.3
SREBF1-204ENST00000395756 TNFRSF18Q9Y5U5 241 aa13.2□□□□□ -0.3
SREBF1-204ENST00000395756 IGKV2D-26A0A0A0MRZ7 120 aa13.2□□□□□ -0.3
SREBF1-204ENST00000395756 RBMY1BA6NDE4 496 aaKnown RBP13.2□□□□□ -0.3
SREBF1-204ENST00000395756 RBMY1EA6NEQ0 496 aaKnown RBP13.2□□□□□ -0.3
SREBF1-204ENST00000395756 RBMY1DP0C7P1 496 aaKnown RBP13.2□□□□□ -0.3
SREBF1-204ENST00000395756 KIF25-AS1Q9Y6Z4 181 aa13.2□□□□□ -0.3
SREBF1-204ENST00000395756 DEFB114Q30KQ6 69 aa13.19□□□□□ -0.3
SREBF1-204ENST00000395756 H3BMM0 161 aa13.19□□□□□ -0.3
SREBF1-204ENST00000395756 ZC2HC1BQ5TFG8 222 aa13.19□□□□□ -0.3
SREBF1-204ENST00000395756 H3BMG7 143 aa13.18□□□□□ -0.3
SREBF1-204ENST00000395756 CCL24O00175 119 aa13.18□□□□□ -0.3
SREBF1-204ENST00000395756 IGKCP01834 107 aa13.18□□□□□ -0.3
SREBF1-204ENST00000395756 MED14OSP0DP75 135 aa13.18□□□□□ -0.3
SREBF1-204ENST00000395756 C2orf66Q6UXQ4 117 aa13.18□□□□□ -0.3
SREBF1-204ENST00000395756 SYT8Q8NBV8 401 aa13.18□□□□□ -0.3
SREBF1-204ENST00000395756 LINC01546A6NGU7 62 aa13.18□□□□□ -0.3
SREBF1-204ENST00000395756 C1QTNF4Q9BXJ3 329 aa13.18□□□□□ -0.3
SREBF1-204ENST00000395756 MAP6D1Q9H9H5 199 aa13.18□□□□□ -0.3
SREBF1-204ENST00000395756 ATP5LO75964 103 aa13.18□□□□□ -0.3
SREBF1-204ENST00000395756 EMP1P54849 157 aa13.18□□□□□ -0.3
SREBF1-204ENST00000395756 LINC01006Q8NI28 216 aa13.18□□□□□ -0.3
SREBF1-204ENST00000395756 NACAE9PAV3 2078 aa13.17□□□□□ -0.3
SREBF1-204ENST00000395756 XCL2Q9UBD3 114 aa13.17□□□□□ -0.3
SREBF1-204ENST00000395756 SMIM13P0DJ93 91 aa13.17□□□□□ -0.3
SREBF1-204ENST00000395756 GCSHP23434 173 aa13.17□□□□□ -0.3
SREBF1-204ENST00000395756 PROK1P58294 105 aa13.17□□□□□ -0.3
SREBF1-204ENST00000395756 HHLA3Q9XRX5 114 aa13.17□□□□□ -0.3
SREBF1-204ENST00000395756 CYSLTR1Q9Y271 337 aa13.17□□□□□ -0.3
SREBF1-204ENST00000395756 RPL39P62891 51 aaKnown RBP13.16□□□□□ -0.3
SREBF1-204ENST00000395756 ORMDL2Q53FV1 153 aa13.16□□□□□ -0.3
SREBF1-204ENST00000395756 TMEM86BQ8N661 226 aa13.16□□□□□ -0.3
SREBF1-204ENST00000395756 OTOGQ6ZRI0 2925 aa13.16□□□□□ -0.3
SREBF1-204ENST00000395756 SDHAF1A6NFY7 115 aa13.16□□□□□ -0.3
SREBF1-204ENST00000395756 HLA-DRB4P13762 266 aa13.16□□□□□ -0.3
SREBF1-204ENST00000395756 NSUN5P1Q3KNT7 163 aa13.16□□□□□ -0.3
SREBF1-204ENST00000395756 LINC01587Q99440 93 aa13.16□□□□□ -0.3
SREBF1-204ENST00000395756 HLA-DRB4X5D2U9 266 aa13.16□□□□□ -0.3
SREBF1-204ENST00000395756 DPM2O94777 84 aa13.15□□□□□ -0.3
SREBF1-204ENST00000395756 C9orf85Q96MD7 179 aa13.15□□□□□ -0.3
SREBF1-204ENST00000395756 FGF6P10767 208 aa13.15□□□□□ -0.3
SREBF1-204ENST00000395756 CRYGDP07320 174 aa13.15□□□□□ -0.3
SREBF1-204ENST00000395756 P0DMU3 169 aa13.15□□□□□ -0.3
SREBF1-204ENST00000395756 FAM231AP0DMU4 169 aa13.15□□□□□ -0.3
SREBF1-204ENST00000395756 FAM231CP0DMU5 169 aa13.15□□□□□ -0.3
SREBF1-204ENST00000395756 ODF3Q96PU9 254 aa13.15□□□□□ -0.3
SREBF1-204ENST00000395756 NXPH4O95158 308 aa13.14□□□□□ -0.31
SREBF1-204ENST00000395756 TP53TG1Q9Y2A0 90 aa13.13□□□□□ -0.31
SREBF1-204ENST00000395756 A0A1B0GWB2 263 aa13.13□□□□□ -0.31
SREBF1-204ENST00000395756 XGP55808 180 aa13.13□□□□□ -0.31
SREBF1-204ENST00000395756 TEX29Q8N6K0 151 aa13.13□□□□□ -0.31
SREBF1-204ENST00000395756 TOMM6Q96B49 74 aa13.12□□□□□ -0.31
SREBF1-204ENST00000395756 KIR2DL4Q99706 377 aa13.12□□□□□ -0.31
SREBF1-204ENST00000395756 Q9UF83 564 aa13.12□□□□□ -0.31
SREBF1-204ENST00000395756 F8W1H4 67 aa13.12□□□□□ -0.31
SREBF1-204ENST00000395756 A0A087WX48 190 aa13.11□□□□□ -0.31
SREBF1-204ENST00000395756 CDIP1Q9H305 208 aa13.11□□□□□ -0.31
SREBF1-204ENST00000395756 ZFP2Q6ZN57 461 aa13.11□□□□□ -0.31
SREBF1-204ENST00000395756 WFDC10AQ9H1F0 79 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms