RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 LRRK2Q5S007 2527 aa8.8□□□□□ -1
UBE2D3-209ENST00000394804 IGLV2-18A0A075B6J9 118 aa8.8□□□□□ -1
UBE2D3-209ENST00000394804 INSP01308 110 aa8.8□□□□□ -1
UBE2D3-209ENST00000394804 CFC1BP0CG36 223 aa8.8□□□□□ -1
UBE2D3-209ENST00000394804 CFC1P0CG37 223 aa8.8□□□□□ -1
UBE2D3-209ENST00000394804 A0A0J9YXV3 536 aa8.8□□□□□ -1
UBE2D3-209ENST00000394804 A0A0U1RRA0 63 aa8.8□□□□□ -1
UBE2D3-209ENST00000394804 GAGE2BQ13066 116 aa8.8□□□□□ -1
UBE2D3-209ENST00000394804 GAGE2EQ4V326 116 aa8.8□□□□□ -1
UBE2D3-209ENST00000394804 GAGE2DQ9UEU5 116 aa8.8□□□□□ -1
UBE2D3-209ENST00000394804 FLNCQ14315 2725 aa8.79□□□□□ -1
UBE2D3-209ENST00000394804 SPAG8Q99932 426 aaPredicted RBP8.79□□□□□ -1
UBE2D3-209ENST00000394804 A4D1N5 150 aa8.79□□□□□ -1
UBE2D3-209ENST00000394804 PRSS47A8MTI9 375 aa8.79□□□□□ -1
UBE2D3-209ENST00000394804 IGKV3OR2-268A0A0C4DH90 116 aa8.79□□□□□ -1
UBE2D3-209ENST00000394804 RNASE3P12724 160 aaKnown RBP8.79□□□□□ -1
UBE2D3-209ENST00000394804 MORN3Q6PF18 240 aaPredicted RBP8.79□□□□□ -1
UBE2D3-209ENST00000394804 MDFICQ9P1T7 246 aa8.79□□□□□ -1
UBE2D3-209ENST00000394804 AGRNO00468 2067 aa8.78□□□□□ -1
UBE2D3-209ENST00000394804 A0A0J9YX75 114 aa8.78□□□□□ -1
UBE2D3-209ENST00000394804 LINC01619G3V211 115 aa8.78□□□□□ -1
UBE2D3-209ENST00000394804 HOXD3P31249 432 aaPredicted RBP8.78□□□□□ -1
UBE2D3-209ENST00000394804 RPL36AP83881 106 aaKnown RBP8.78□□□□□ -1
UBE2D3-209ENST00000394804 TEN1Q86WV5 123 aa8.78□□□□□ -1
UBE2D3-209ENST00000394804 RPL36ALQ969Q0 106 aaKnown RBP8.78□□□□□ -1
UBE2D3-209ENST00000394804 ADGRG4Q8IZF6 3080 aa8.78□□□□□ -1
UBE2D3-209ENST00000394804 TRBV7-3A0A075B6L6 115 aa8.78□□□□□ -1
UBE2D3-209ENST00000394804 FOXI1Q12951 378 aa8.78□□□□□ -1
UBE2D3-209ENST00000394804 HELZ2Q9BYK8 2649 aaKnown RBP8.78□□□□□ -1
UBE2D3-209ENST00000394804 ADARB2-AS1A8MUL3 147 aa8.78□□□□□ -1
UBE2D3-209ENST00000394804 TSPAN13O95857 204 aa8.78□□□□□ -1
UBE2D3-209ENST00000394804 Q5PR19 223 aa8.78□□□□□ -1
UBE2D3-209ENST00000394804 MAPK1IP1LQ8NDC0 245 aa8.78□□□□□ -1
UBE2D3-209ENST00000394804 TRGV1A0A0A0MS02 117 aa8.77□□□□□ -1
UBE2D3-209ENST00000394804 J3QLI3 93 aa8.77□□□□□ -1
UBE2D3-209ENST00000394804 NDUFA11Q86Y39 141 aa8.77□□□□□ -1
UBE2D3-209ENST00000394804 NACAE9PAV3 2078 aa8.77□□□□□ -1.01
UBE2D3-209ENST00000394804 A0A1W2PRX2 142 aa8.77□□□□□ -1.01
UBE2D3-209ENST00000394804 RNASE13Q5GAN3 156 aaKnown RBP8.77□□□□□ -1.01
UBE2D3-209ENST00000394804 C20orf203Q8NBC4 194 aa8.77□□□□□ -1.01
UBE2D3-209ENST00000394804 ATP6V0E2Q8NHE4 81 aa8.77□□□□□ -1.01
UBE2D3-209ENST00000394804 TRGV2A0A075B6R0 118 aa8.76□□□□□ -1.01
UBE2D3-209ENST00000394804 C19orf84I3L1E1 186 aa8.76□□□□□ -1.01
UBE2D3-209ENST00000394804 TOMM7Q9P0U1 55 aa8.76□□□□□ -1.01
UBE2D3-209ENST00000394804 IGHV4OR15-8A0A075B7B6 117 aa8.76□□□□□ -1.01
UBE2D3-209ENST00000394804 A0A087WW49 117 aa8.76□□□□□ -1.01
UBE2D3-209ENST00000394804 IGHV3-16A0A0C4DH30 117 aa8.76□□□□□ -1.01
UBE2D3-209ENST00000394804 LINC01546A6NGU7 62 aa8.76□□□□□ -1.01
UBE2D3-209ENST00000394804 RPL32P62910 135 aaKnown RBP8.76□□□□□ -1.01
UBE2D3-209ENST00000394804 A0A0J9YY99 117 aa8.76□□□□□ -1.01
UBE2D3-209ENST00000394804 DNAL4O96015 105 aa8.76□□□□□ -1.01
UBE2D3-209ENST00000394804 ODF3Q96PU9 254 aa8.76□□□□□ -1.01
UBE2D3-209ENST00000394804 VPREB3Q9UKI3 123 aa8.76□□□□□ -1.01
UBE2D3-209ENST00000394804 A0A1W2PPR1 153 aa8.76□□□□□ -1.01
UBE2D3-209ENST00000394804 MUSTN1Q8IVN3 82 aa8.76□□□□□ -1.01
UBE2D3-209ENST00000394804 OPRPNQ99935 248 aaPredicted RBP8.76□□□□□ -1.01
UBE2D3-209ENST00000394804 USP9XQ93008 2570 aaPredicted RBP8.75□□□□□ -1.01
UBE2D3-209ENST00000394804 IGHV3-38A0A0C4DH36 116 aa8.75□□□□□ -1.01
UBE2D3-209ENST00000394804 RNF223E7ERA6 249 aa8.75□□□□□ -1.01
UBE2D3-209ENST00000394804 H3BMM0 161 aa8.75□□□□□ -1.01
UBE2D3-209ENST00000394804 UBE2WQ96B02 151 aa8.75□□□□□ -1.01
UBE2D3-209ENST00000394804 TMEM89A2RUT3 159 aa8.75□□□□□ -1.01
UBE2D3-209ENST00000394804 LGALS9O00182 355 aa8.75□□□□□ -1.01
UBE2D3-209ENST00000394804 UBE2E2Q96LR5 201 aa8.75□□□□□ -1.01
UBE2D3-209ENST00000394804 TRAV13-1A0A0B4J241 112 aa8.74□□□□□ -1.01
UBE2D3-209ENST00000394804 KLLNB2CW77 178 aa8.74□□□□□ -1.01
UBE2D3-209ENST00000394804 C11orf44Q8N8P7 122 aa8.74□□□□□ -1.01
UBE2D3-209ENST00000394804 SLC25A29Q8N8R3 303 aa8.74□□□□□ -1.01
UBE2D3-209ENST00000394804 NTN5Q8WTR8 489 aaPredicted RBP8.74□□□□□ -1.01
UBE2D3-209ENST00000394804 SPANXA1Q9NS26 97 aa8.74□□□□□ -1.01
UBE2D3-209ENST00000394804 XCL2Q9UBD3 114 aa8.74□□□□□ -1.01
UBE2D3-209ENST00000394804 IGHV3-53P01767 116 aa8.74□□□□□ -1.01
UBE2D3-209ENST00000394804 POLR2KP53803 58 aaKnown RBP8.74□□□□□ -1.01
UBE2D3-209ENST00000394804 PTH2Q96A98 100 aa8.74□□□□□ -1.01
UBE2D3-209ENST00000394804 TRBV27A0A0K0K1C4 114 aa8.74□□□□□ -1.01
UBE2D3-209ENST00000394804 CRIP2P52943 208 aaPredicted RBP8.74□□□□□ -1.01
UBE2D3-209ENST00000394804 PRIMA1Q86XR5 153 aa8.74□□□□□ -1.01
UBE2D3-209ENST00000394804 C2CD3Q4AC94 2353 aa8.74□□□□□ -1.01
UBE2D3-209ENST00000394804 TRAV8-3A0A0A6YYJ7 113 aa8.73□□□□□ -1.01
UBE2D3-209ENST00000394804 TRBV6-5A0A0K0K1A5 114 aa8.73□□□□□ -1.01
UBE2D3-209ENST00000394804 K7EQG2 157 aa8.73□□□□□ -1.01
UBE2D3-209ENST00000394804 ZNF625Q96I27 306 aaPredicted RBP8.73□□□□□ -1.01
UBE2D3-209ENST00000394804 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.72□□□□□ -1.01
UBE2D3-209ENST00000394804 IGKV2-29A2NJV5 120 aaPredicted RBP8.72□□□□□ -1.01
UBE2D3-209ENST00000394804 J3QKU1 62 aa8.72□□□□□ -1.01
UBE2D3-209ENST00000394804 TCL1BO95988 128 aa8.72□□□□□ -1.01
UBE2D3-209ENST00000394804 NSUN5P1Q3KNT7 163 aa8.72□□□□□ -1.01
UBE2D3-209ENST00000394804 ANKRD29Q8N6D5 301 aa8.72□□□□□ -1.01
UBE2D3-209ENST00000394804 ZNRF2Q8NHG8 242 aa8.72□□□□□ -1.01
UBE2D3-209ENST00000394804 WNK1Q9H4A3 2382 aa8.72□□□□□ -1.01
UBE2D3-209ENST00000394804 M0QY20 66 aa8.72□□□□□ -1.01
UBE2D3-209ENST00000394804 DEFB136Q30KP8 78 aa8.72□□□□□ -1.01
UBE2D3-209ENST00000394804 MYO9AB2RTY4 2548 aa8.72□□□□□ -1.01
UBE2D3-209ENST00000394804 PLA2G2AP14555 144 aa8.72□□□□□ -1.01
UBE2D3-209ENST00000394804 SLURP1P55000 103 aa8.71□□□□□ -1.01
UBE2D3-209ENST00000394804 OR13C6PQ8NH95 151 aa8.71□□□□□ -1.01
UBE2D3-209ENST00000394804 TRGV4A0A0C4DH28 118 aa8.71□□□□□ -1.02
UBE2D3-209ENST00000394804 SOCS3O14543 225 aa8.71□□□□□ -1.02
UBE2D3-209ENST00000394804 LINC01620Q4KN68 170 aa8.71□□□□□ -1.02
UBE2D3-209ENST00000394804 PTPN13Q12923 2485 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms