RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 PKD1L2Q7Z442 2459 aa13.89□□□□□ -0.19
CBX1-202ENST00000393408 LEPROTO15243 131 aa13.88□□□□□ -0.19
CBX1-202ENST00000393408 DSCR9P59020 149 aa13.88□□□□□ -0.19
CBX1-202ENST00000393408 ATP6V0E2Q8NHE4 81 aa13.88□□□□□ -0.19
CBX1-202ENST00000393408 TRGV11A0A075B6L2 103 aa13.88□□□□□ -0.19
CBX1-202ENST00000393408 SCGB1A1P11684 91 aa13.88□□□□□ -0.19
CBX1-202ENST00000393408 LYRM7Q5U5X0 104 aa13.88□□□□□ -0.19
CBX1-202ENST00000393408 NRGNQ92686 78 aa13.88□□□□□ -0.19
CBX1-202ENST00000393408 C1QTNF4Q9BXJ3 329 aa13.88□□□□□ -0.19
CBX1-202ENST00000393408 CRYBG3Q68DQ2 2970 aa13.87□□□□□ -0.19
CBX1-202ENST00000393408 LINC01356Q8N9X3 169 aa13.87□□□□□ -0.19
CBX1-202ENST00000393408 DUX5Q96PT3 197 aa13.87□□□□□ -0.19
CBX1-202ENST00000393408 ZNF22P17026 224 aaPredicted RBP13.86□□□□□ -0.19
CBX1-202ENST00000393408 C10orf126Q8N4M7 172 aa13.86□□□□□ -0.19
CBX1-202ENST00000393408 IGLV4-3A0A075B6K6 122 aa13.86□□□□□ -0.19
CBX1-202ENST00000393408 HOXD3P31249 432 aaPredicted RBP13.86□□□□□ -0.19
CBX1-202ENST00000393408 SMAGPQ0VAQ4 97 aa13.86□□□□□ -0.19
CBX1-202ENST00000393408 FOXI1Q12951 378 aa13.86□□□□□ -0.19
CBX1-202ENST00000393408 DOPEY2Q9Y3R5 2298 aa13.86□□□□□ -0.19
CBX1-202ENST00000393408 RBMY1A1P0DJD3 496 aaKnown RBP13.85□□□□□ -0.19
CBX1-202ENST00000393408 RBMY1CP0DJD4 496 aa13.85□□□□□ -0.19
CBX1-202ENST00000393408 RBMY1FQ15415 496 aaKnown RBP13.85□□□□□ -0.19
CBX1-202ENST00000393408 RHODO00212 210 aa13.85□□□□□ -0.19
CBX1-202ENST00000393408 TCL1BO95988 128 aa13.84□□□□□ -0.19
CBX1-202ENST00000393408 ELANEP08246 267 aa13.84□□□□□ -0.19
CBX1-202ENST00000393408 CFAP46Q8IYW2 2715 aa13.84□□□□□ -0.19
CBX1-202ENST00000393408 A0A0J9YXV3 536 aa13.84□□□□□ -0.19
CBX1-202ENST00000393408 EDA2RQ9HAV5 297 aa13.84□□□□□ -0.19
CBX1-202ENST00000393408 PRO1854Q9UHT4 67 aa13.84□□□□□ -0.19
CBX1-202ENST00000393408 A0A096LNT2 108 aa13.83□□□□□ -0.19
CBX1-202ENST00000393408 ZNF418Q8TF45 676 aaPredicted RBP13.83□□□□□ -0.19
CBX1-202ENST00000393408 UBE2E2Q96LR5 201 aa13.83□□□□□ -0.19
CBX1-202ENST00000393408 VCX2Q9H322 139 aa13.83□□□□□ -0.19
CBX1-202ENST00000393408 DOPEY1Q5JWR5 2465 aa13.83□□□□□ -0.2
CBX1-202ENST00000393408 SORL1Q92673 2214 aa13.83□□□□□ -0.2
CBX1-202ENST00000393408 TRBV20-1A0A075B6N2 111 aa13.83□□□□□ -0.2
CBX1-202ENST00000393408 J3QLI3 93 aa13.83□□□□□ -0.2
CBX1-202ENST00000393408 VPREB3Q9UKI3 123 aa13.83□□□□□ -0.2
CBX1-202ENST00000393408 CACNA1AO00555 2505 aa13.83□□□□□ -0.2
CBX1-202ENST00000393408 ZNF702PQ9H963 129 aa13.82□□□□□ -0.2
CBX1-202ENST00000393408 IGHV3-64A0A075B6Q5 118 aa13.82□□□□□ -0.2
CBX1-202ENST00000393408 TCTEX1D4Q5JR98 221 aa13.82□□□□□ -0.2
CBX1-202ENST00000393408 A4D1N5 150 aa13.81□□□□□ -0.2
CBX1-202ENST00000393408 KNCNA6PVL3 124 aa13.81□□□□□ -0.2
CBX1-202ENST00000393408 EIF4EBP3O60516 100 aaPredicted RBP13.81□□□□□ -0.2
CBX1-202ENST00000393408 FAM104AQ969W3 186 aa13.81□□□□□ -0.2
CBX1-202ENST00000393408 PYGO1Q9Y3Y4 419 aa13.81□□□□□ -0.2
CBX1-202ENST00000393408 TGFAP01135 160 aa13.8□□□□□ -0.2
CBX1-202ENST00000393408 SBSPONQ8IVN8 264 aa13.8□□□□□ -0.2
CBX1-202ENST00000393408 PTH2Q96A98 100 aa13.8□□□□□ -0.2
CBX1-202ENST00000393408 FLNCQ14315 2725 aa13.8□□□□□ -0.2
CBX1-202ENST00000393408 IGHV3-73A0A0B4J1V6 119 aa13.8□□□□□ -0.2
CBX1-202ENST00000393408 A8MTW9 85 aa13.8□□□□□ -0.2
CBX1-202ENST00000393408 PROK1P58294 105 aa13.79□□□□□ -0.2
CBX1-202ENST00000393408 MAPK1IP1LQ8NDC0 245 aa13.79□□□□□ -0.2
CBX1-202ENST00000393408 HTN1P15515 57 aa13.79□□□□□ -0.2
CBX1-202ENST00000393408 TMEM263Q8WUH6 116 aaKnown RBP13.79□□□□□ -0.2
CBX1-202ENST00000393408 USP9XQ93008 2570 aaPredicted RBP13.78□□□□□ -0.2
CBX1-202ENST00000393408 TRAV2A0A0B4J234 112 aa13.78□□□□□ -0.2
CBX1-202ENST00000393408 DEFB131AP59861 70 aa13.78□□□□□ -0.2
CBX1-202ENST00000393408 Q6YL49 198 aa13.78□□□□□ -0.2
CBX1-202ENST00000393408 TEN1Q86WV5 123 aa13.78□□□□□ -0.2
CBX1-202ENST00000393408 M0R2P5 195 aa13.78□□□□□ -0.2
CBX1-202ENST00000393408 IGHV3-33P01772 117 aa13.78□□□□□ -0.2
CBX1-202ENST00000393408 CD28P10747 220 aa13.78□□□□□ -0.2
CBX1-202ENST00000393408 MUSTN1Q8IVN3 82 aa13.78□□□□□ -0.2
CBX1-202ENST00000393408 CARD19Q96LW7 228 aa13.78□□□□□ -0.2
CBX1-202ENST00000393408 A0A0B4J2C4 111 aa13.77□□□□□ -0.21
CBX1-202ENST00000393408 RBMY1BA6NDE4 496 aaKnown RBP13.77□□□□□ -0.21
CBX1-202ENST00000393408 RBMY1EA6NEQ0 496 aaKnown RBP13.77□□□□□ -0.21
CBX1-202ENST00000393408 FSHBP01225 129 aa13.77□□□□□ -0.21
CBX1-202ENST00000393408 RBMY1DP0C7P1 496 aaKnown RBP13.77□□□□□ -0.21
CBX1-202ENST00000393408 SCGB1C2P0DMR2 95 aa13.77□□□□□ -0.21
CBX1-202ENST00000393408 SLURP1P55000 103 aa13.77□□□□□ -0.21
CBX1-202ENST00000393408 NACAE9PAV3 2078 aa13.77□□□□□ -0.21
CBX1-202ENST00000393408 H3BMM0 161 aa13.76□□□□□ -0.21
CBX1-202ENST00000393408 CRYBA4P53673 196 aa13.76□□□□□ -0.21
CBX1-202ENST00000393408 MRPS36P82909 103 aaKnown RBP13.76□□□□□ -0.21
CBX1-202ENST00000393408 Q5PR19 223 aa13.76□□□□□ -0.21
CBX1-202ENST00000393408 PPDPFLQ8WWR9 84 aa13.76□□□□□ -0.21
CBX1-202ENST00000393408 CDIP1Q9H305 208 aa13.76□□□□□ -0.21
CBX1-202ENST00000393408 A0A0J9YXY3 114 aa13.76□□□□□ -0.21
CBX1-202ENST00000393408 IGHV3-30-3P0DP02 117 aa13.76□□□□□ -0.21
CBX1-202ENST00000393408 C18orf65Q6ZTR6 163 aa13.75□□□□□ -0.21
CBX1-202ENST00000393408 RAX2Q96IS3 184 aa13.75□□□□□ -0.21
CBX1-202ENST00000393408 SPXQ9BT56 116 aa13.75□□□□□ -0.21
CBX1-202ENST00000393408 TNFRSF18Q9Y5U5 241 aa13.75□□□□□ -0.21
CBX1-202ENST00000393408 A8MWV9 139 aa13.75□□□□□ -0.21
CBX1-202ENST00000393408 PRM2P04554 102 aa13.75□□□□□ -0.21
CBX1-202ENST00000393408 DEFB136Q30KP8 78 aa13.75□□□□□ -0.21
CBX1-202ENST00000393408 CEMP1Q6PRD7 247 aaPredicted RBP13.75□□□□□ -0.21
CBX1-202ENST00000393408 DUX3Q96PT4 197 aa13.75□□□□□ -0.21
CBX1-202ENST00000393408 TIMM21Q9BVV7 248 aa13.74□□□□□ -0.21
CBX1-202ENST00000393408 UTP20O75691 2785 aaKnown RBP13.74□□□□□ -0.21
CBX1-202ENST00000393408 FHL3Q13643 280 aa13.74□□□□□ -0.21
CBX1-202ENST00000393408 Q9UF83 564 aa13.74□□□□□ -0.21
CBX1-202ENST00000393408 ERG28Q9UKR5 140 aa13.74□□□□□ -0.21
CBX1-202ENST00000393408 PIK3CD-AS1Q5SR53 167 aa13.73□□□□□ -0.21
CBX1-202ENST00000393408 Q6ZSN1 163 aa13.73□□□□□ -0.21
CBX1-202ENST00000393408 BEX4Q9NWD9 120 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms