RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 TTC28Q96AY4 2481 aa10.34□□□□□ -0.75
GPC6-201ENST00000377047 NACAE9PAV3 2078 aa10.34□□□□□ -0.75
GPC6-201ENST00000377047 FAM222AQ5U5X8 452 aa10.34□□□□□ -0.75
GPC6-201ENST00000377047 NTN5Q8WTR8 489 aaPredicted RBP10.33□□□□□ -0.76
GPC6-201ENST00000377047 CTRLP40313 264 aa10.33□□□□□ -0.76
GPC6-201ENST00000377047 DEFB114Q30KQ6 69 aa10.33□□□□□ -0.76
GPC6-201ENST00000377047 Q6ZTI0 123 aa10.33□□□□□ -0.76
GPC6-201ENST00000377047 HIVEP2P31629 2446 aa10.33□□□□□ -0.76
GPC6-201ENST00000377047 LGALS9O00182 355 aa10.33□□□□□ -0.76
GPC6-201ENST00000377047 C11orf71Q6IPW1 123 aa10.33□□□□□ -0.76
GPC6-201ENST00000377047 OPRPNQ99935 248 aaPredicted RBP10.33□□□□□ -0.76
GPC6-201ENST00000377047 CXCL5P42830 114 aa10.32□□□□□ -0.76
GPC6-201ENST00000377047 HIGD2BQ4VC39 106 aa10.32□□□□□ -0.76
GPC6-201ENST00000377047 LINC00482Q8N8I6 264 aa10.32□□□□□ -0.76
GPC6-201ENST00000377047 IGKV1D-37A0A075B6S9 117 aa10.32□□□□□ -0.76
GPC6-201ENST00000377047 PLA2G2EQ9NZK7 142 aa10.32□□□□□ -0.76
GPC6-201ENST00000377047 IGKV2-24A0A0C4DH68 120 aa10.32□□□□□ -0.76
GPC6-201ENST00000377047 SPATA25Q9BR10 227 aa10.32□□□□□ -0.76
GPC6-201ENST00000377047 OTOGLQ3ZCN5 2332 aa10.32□□□□□ -0.76
GPC6-201ENST00000377047 DEFB131BA0A096LNP1 70 aa10.32□□□□□ -0.76
GPC6-201ENST00000377047 P0DMU3 169 aa10.32□□□□□ -0.76
GPC6-201ENST00000377047 FAM231AP0DMU4 169 aa10.32□□□□□ -0.76
GPC6-201ENST00000377047 FAM231CP0DMU5 169 aa10.32□□□□□ -0.76
GPC6-201ENST00000377047 PLCE1Q9P212 2302 aa10.31□□□□□ -0.76
GPC6-201ENST00000377047 TRBV6-1A0A0K0K1D8 114 aa10.31□□□□□ -0.76
GPC6-201ENST00000377047 ANKRD29Q8N6D5 301 aa10.31□□□□□ -0.76
GPC6-201ENST00000377047 LINC00574Q9H8X3 128 aa10.31□□□□□ -0.76
GPC6-201ENST00000377047 K7EP13 123 aa10.31□□□□□ -0.76
GPC6-201ENST00000377047 CRYBA4P53673 196 aa10.3□□□□□ -0.76
GPC6-201ENST00000377047 C14orf177Q52M58 125 aa10.3□□□□□ -0.76
GPC6-201ENST00000377047 A4D1N5 150 aa10.3□□□□□ -0.76
GPC6-201ENST00000377047 H0YGX0 51 aa10.3□□□□□ -0.76
GPC6-201ENST00000377047 LINC01545Q5VT33 79 aa10.3□□□□□ -0.76
GPC6-201ENST00000377047 C10orf99Q6UWK7 81 aa10.3□□□□□ -0.76
GPC6-201ENST00000377047 PLA2G2AP14555 144 aa10.3□□□□□ -0.76
GPC6-201ENST00000377047 CEMP1Q6PRD7 247 aaPredicted RBP10.3□□□□□ -0.76
GPC6-201ENST00000377047 TRBV10-1A0A0K0K1A3 114 aa10.29□□□□□ -0.76
GPC6-201ENST00000377047 FREM1Q5H8C1 2179 aa10.29□□□□□ -0.76
GPC6-201ENST00000377047 LYRM9A8MSI8 78 aa10.29□□□□□ -0.76
GPC6-201ENST00000377047 NDUFB1O75438 58 aa10.29□□□□□ -0.76
GPC6-201ENST00000377047 CRYGDP07320 174 aa10.29□□□□□ -0.76
GPC6-201ENST00000377047 LINC00269Q8N2A0 174 aa10.29□□□□□ -0.76
GPC6-201ENST00000377047 C1orf229Q6ZS94 237 aaPredicted RBP10.29□□□□□ -0.76
GPC6-201ENST00000377047 SMIM9A6NGZ8 99 aa10.28□□□□□ -0.76
GPC6-201ENST00000377047 K7EQG2 157 aa10.28□□□□□ -0.76
GPC6-201ENST00000377047 ANKRD39Q53RE8 183 aa10.28□□□□□ -0.76
GPC6-201ENST00000377047 Q6ZUT4 128 aa10.28□□□□□ -0.76
GPC6-201ENST00000377047 Q6ZVH6 145 aa10.28□□□□□ -0.76
GPC6-201ENST00000377047 DIRC1Q969H9 104 aa10.28□□□□□ -0.76
GPC6-201ENST00000377047 PCDH15Q96QU1 1955 aa10.28□□□□□ -0.76
GPC6-201ENST00000377047 CEP192Q8TEP8 1941 aa10.28□□□□□ -0.76
GPC6-201ENST00000377047 TNRC6AQ8NDV7 1962 aaKnown RBP10.28□□□□□ -0.76
GPC6-201ENST00000377047 ZNF80P51504 273 aaPredicted RBP10.27□□□□□ -0.76
GPC6-201ENST00000377047 MIR7-3HGQ8N6C7 128 aa10.27□□□□□ -0.76
GPC6-201ENST00000377047 FSTL3O95633 263 aa10.27□□□□□ -0.76
GPC6-201ENST00000377047 C20orf173Q96LM9 149 aa10.27□□□□□ -0.76
GPC6-201ENST00000377047 NUPR1O60356 82 aa10.27□□□□□ -0.77
GPC6-201ENST00000377047 REG3AQ06141 175 aa10.27□□□□□ -0.77
GPC6-201ENST00000377047 CHD3Q12873 2000 aaKnown RBP10.27□□□□□ -0.77
GPC6-201ENST00000377047 C20orf203Q8NBC4 194 aa10.27□□□□□ -0.77
GPC6-201ENST00000377047 B9D2Q9BPU9 175 aa10.27□□□□□ -0.77
GPC6-201ENST00000377047 C11orf86A6NJI1 115 aa10.26□□□□□ -0.77
GPC6-201ENST00000377047 ODF3Q96PU9 254 aa10.26□□□□□ -0.77
GPC6-201ENST00000377047 CUL9Q8IWT3 2517 aa10.26□□□□□ -0.77
GPC6-201ENST00000377047 LY6LH3BQJ8 138 aa10.25□□□□□ -0.77
GPC6-201ENST00000377047 P0C879 139 aa10.25□□□□□ -0.77
GPC6-201ENST00000377047 C19orf71A6NCJ1 209 aa10.25□□□□□ -0.77
GPC6-201ENST00000377047 ZNF702PQ9H963 129 aa10.25□□□□□ -0.77
GPC6-201ENST00000377047 DSCAMO60469 2012 aa10.25□□□□□ -0.77
GPC6-201ENST00000377047 BRWD1-AS2P59051 145 aa10.25□□□□□ -0.77
GPC6-201ENST00000377047 IGHV1-58A0A0C4DH39 117 aa10.24□□□□□ -0.77
GPC6-201ENST00000377047 LRCOL1A6NCL2 159 aa10.24□□□□□ -0.77
GPC6-201ENST00000377047 ZFAND2AQ8N6M9 145 aa10.24□□□□□ -0.77
GPC6-201ENST00000377047 TTTY13Q9BZ97 58 aa10.24□□□□□ -0.77
GPC6-201ENST00000377047 NPSP0C0P6 89 aa10.24□□□□□ -0.77
GPC6-201ENST00000377047 NREPQ16612 68 aa10.24□□□□□ -0.77
GPC6-201ENST00000377047 CRYGBP07316 175 aa10.24□□□□□ -0.77
GPC6-201ENST00000377047 NUP210LQ5VU65 1888 aa10.24□□□□□ -0.77
GPC6-201ENST00000377047 TNRC6BQ9UPQ9 1833 aaKnown RBP10.24□□□□□ -0.77
GPC6-201ENST00000377047 E9PLD3 99 aa10.23□□□□□ -0.77
GPC6-201ENST00000377047 LECT2O14960 151 aa10.23□□□□□ -0.77
GPC6-201ENST00000377047 Q6ZPA2 131 aa10.23□□□□□ -0.77
GPC6-201ENST00000377047 ALPK3Q96L96 1907 aa10.23□□□□□ -0.77
GPC6-201ENST00000377047 H3BQ85 93 aa10.23□□□□□ -0.77
GPC6-201ENST00000377047 MIFP14174 115 aa10.23□□□□□ -0.77
GPC6-201ENST00000377047 EBI3Q14213 229 aa10.23□□□□□ -0.77
GPC6-201ENST00000377047 LINC01006Q8NI28 216 aa10.23□□□□□ -0.77
GPC6-201ENST00000377047 PSMG3-AS1Q96PY0 264 aa10.22□□□□□ -0.77
GPC6-201ENST00000377047 FRMD6-AS1P0C7T7 363 aa10.22□□□□□ -0.77
GPC6-201ENST00000377047 C11orf1Q9H5F2 150 aa10.22□□□□□ -0.77
GPC6-201ENST00000377047 NCOA6Q14686 2063 aaPredicted RBP10.22□□□□□ -0.77
GPC6-201ENST00000377047 TNCP24821 2201 aa10.22□□□□□ -0.77
GPC6-201ENST00000377047 CHCHD10Q8WYQ3 142 aaPredicted RBP10.22□□□□□ -0.77
GPC6-201ENST00000377047 NFE4Q86UQ8 179 aa10.22□□□□□ -0.77
GPC6-201ENST00000377047 CDPF1Q6NVV7 123 aa10.21□□□□□ -0.78
GPC6-201ENST00000377047 C18orf65Q6ZTR6 163 aa10.21□□□□□ -0.78
GPC6-201ENST00000377047 SPANXDQ9BXN6 97 aa10.21□□□□□ -0.78
GPC6-201ENST00000377047 GDF5OSQ5U4N7 250 aa10.21□□□□□ -0.78
GPC6-201ENST00000377047 MED12LQ86YW9 2145 aa10.2□□□□□ -0.78
GPC6-201ENST00000377047 CHKB-CPT1BH3BT56 60 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms