RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 C20orf203Q8NBC4 194 aa10.73□□□□□ -0.69
MSH5-201ENST00000375703 TRGV11A0A075B6L2 103 aa10.73□□□□□ -0.69
MSH5-201ENST00000375703 MAPK1IP1LQ8NDC0 245 aa10.73□□□□□ -0.69
MSH5-201ENST00000375703 CSPG4Q6UVK1 2322 aa10.73□□□□□ -0.69
MSH5-201ENST00000375703 ELANEP08246 267 aa10.72□□□□□ -0.69
MSH5-201ENST00000375703 HTN1P15515 57 aa10.72□□□□□ -0.69
MSH5-201ENST00000375703 AMELXQ99217 191 aa10.72□□□□□ -0.69
MSH5-201ENST00000375703 CFC1BP0CG36 223 aa10.72□□□□□ -0.69
MSH5-201ENST00000375703 CFC1P0CG37 223 aa10.72□□□□□ -0.69
MSH5-201ENST00000375703 CELSR2Q9HCU4 2923 aa10.72□□□□□ -0.69
MSH5-201ENST00000375703 TMEM223A0PJW6 202 aa10.71□□□□□ -0.69
MSH5-201ENST00000375703 UBE2D3P61077 147 aa10.71□□□□□ -0.69
MSH5-201ENST00000375703 UBE2D2P62837 147 aa10.71□□□□□ -0.69
MSH5-201ENST00000375703 TCTEX1D4Q5JR98 221 aa10.71□□□□□ -0.69
MSH5-201ENST00000375703 CFAP126Q5VTH2 177 aa10.71□□□□□ -0.69
MSH5-201ENST00000375703 UBE2E2Q96LR5 201 aa10.71□□□□□ -0.69
MSH5-201ENST00000375703 VCX2Q9H322 139 aa10.71□□□□□ -0.69
MSH5-201ENST00000375703 J3QLI3 93 aa10.71□□□□□ -0.69
MSH5-201ENST00000375703 LEPROTO15243 131 aa10.71□□□□□ -0.69
MSH5-201ENST00000375703 INSL3P51460 131 aa10.71□□□□□ -0.69
MSH5-201ENST00000375703 RNF152Q8N8N0 203 aa10.71□□□□□ -0.69
MSH5-201ENST00000375703 VPREB3Q9UKI3 123 aa10.71□□□□□ -0.69
MSH5-201ENST00000375703 KNCNA6PVL3 124 aa10.7□□□□□ -0.7
MSH5-201ENST00000375703 SMCPP49901 116 aaPredicted RBP10.7□□□□□ -0.7
MSH5-201ENST00000375703 LYRM7Q5U5X0 104 aa10.7□□□□□ -0.7
MSH5-201ENST00000375703 IGHV3-73A0A0B4J1V6 119 aa10.7□□□□□ -0.7
MSH5-201ENST00000375703 RBMY1A1P0DJD3 496 aaKnown RBP10.7□□□□□ -0.7
MSH5-201ENST00000375703 RBMY1CP0DJD4 496 aa10.7□□□□□ -0.7
MSH5-201ENST00000375703 CKS1BP61024 79 aa10.7□□□□□ -0.7
MSH5-201ENST00000375703 RBMY1FQ15415 496 aaKnown RBP10.7□□□□□ -0.7
MSH5-201ENST00000375703 CRYBG3Q68DQ2 2970 aa10.69□□□□□ -0.7
MSH5-201ENST00000375703 IGLV4-3A0A075B6K6 122 aa10.69□□□□□ -0.7
MSH5-201ENST00000375703 IGHV3-64A0A075B6Q5 118 aa10.69□□□□□ -0.7
MSH5-201ENST00000375703 A0A0J9YXV3 536 aa10.69□□□□□ -0.7
MSH5-201ENST00000375703 RHODO00212 210 aa10.69□□□□□ -0.7
MSH5-201ENST00000375703 ZNF22P17026 224 aaPredicted RBP10.69□□□□□ -0.7
MSH5-201ENST00000375703 ZNF702PQ9H963 129 aa10.69□□□□□ -0.7
MSH5-201ENST00000375703 A0A096LNT2 108 aa10.69□□□□□ -0.7
MSH5-201ENST00000375703 C10orf126Q8N4M7 172 aa10.69□□□□□ -0.7
MSH5-201ENST00000375703 ZNF418Q8TF45 676 aaPredicted RBP10.69□□□□□ -0.7
MSH5-201ENST00000375703 SPATA25Q9BR10 227 aa10.69□□□□□ -0.7
MSH5-201ENST00000375703 PRO1854Q9UHT4 67 aa10.69□□□□□ -0.7
MSH5-201ENST00000375703 DEFB131AP59861 70 aa10.68□□□□□ -0.7
MSH5-201ENST00000375703 Q6YL49 198 aa10.68□□□□□ -0.7
MSH5-201ENST00000375703 PROK1P58294 105 aa10.68□□□□□ -0.7
MSH5-201ENST00000375703 FOXI1Q12951 378 aa10.68□□□□□ -0.7
MSH5-201ENST00000375703 BEX4Q9NWD9 120 aaPredicted RBP10.68□□□□□ -0.7
MSH5-201ENST00000375703 SCGB1C2P0DMR2 95 aa10.67□□□□□ -0.7
MSH5-201ENST00000375703 C1QTNF4Q9BXJ3 329 aa10.67□□□□□ -0.7
MSH5-201ENST00000375703 SORL1Q92673 2214 aa10.67□□□□□ -0.7
MSH5-201ENST00000375703 TCL1BO95988 128 aa10.67□□□□□ -0.7
MSH5-201ENST00000375703 SLURP1P55000 103 aa10.67□□□□□ -0.7
MSH5-201ENST00000375703 TRBV20-1A0A075B6N2 111 aa10.66□□□□□ -0.7
MSH5-201ENST00000375703 A4D1N5 150 aa10.66□□□□□ -0.7
MSH5-201ENST00000375703 PRM2P04554 102 aa10.66□□□□□ -0.7
MSH5-201ENST00000375703 DEFB136Q30KP8 78 aa10.66□□□□□ -0.7
MSH5-201ENST00000375703 ATP6V0E2Q8NHE4 81 aa10.66□□□□□ -0.7
MSH5-201ENST00000375703 TRAV2A0A0B4J234 112 aa10.66□□□□□ -0.7
MSH5-201ENST00000375703 C18orf65Q6ZTR6 163 aa10.66□□□□□ -0.7
MSH5-201ENST00000375703 PKD1L2Q7Z442 2459 aa10.66□□□□□ -0.7
MSH5-201ENST00000375703 SPXQ9BT56 116 aa10.66□□□□□ -0.7
MSH5-201ENST00000375703 TNFRSF18Q9Y5U5 241 aa10.66□□□□□ -0.7
MSH5-201ENST00000375703 H3BMM0 161 aa10.65□□□□□ -0.7
MSH5-201ENST00000375703 DUX3Q96PT4 197 aa10.65□□□□□ -0.7
MSH5-201ENST00000375703 EDA2RQ9HAV5 297 aa10.65□□□□□ -0.7
MSH5-201ENST00000375703 PYGO1Q9Y3Y4 419 aa10.65□□□□□ -0.7
MSH5-201ENST00000375703 CD28P10747 220 aa10.65□□□□□ -0.7
MSH5-201ENST00000375703 SCGB1A1P11684 91 aa10.65□□□□□ -0.7
MSH5-201ENST00000375703 MUSTN1Q8IVN3 82 aa10.65□□□□□ -0.7
MSH5-201ENST00000375703 DOPEY2Q9Y3R5 2298 aa10.65□□□□□ -0.71
MSH5-201ENST00000375703 PTH2Q96A98 100 aa10.64□□□□□ -0.71
MSH5-201ENST00000375703 RAX2Q96IS3 184 aa10.64□□□□□ -0.71
MSH5-201ENST00000375703 DOPEY1Q5JWR5 2465 aa10.64□□□□□ -0.71
MSH5-201ENST00000375703 A8MWV9 139 aa10.64□□□□□ -0.71
MSH5-201ENST00000375703 CEMP1Q6PRD7 247 aaPredicted RBP10.64□□□□□ -0.71
MSH5-201ENST00000375703 CFAP46Q8IYW2 2715 aa10.64□□□□□ -0.71
MSH5-201ENST00000375703 M0R2P5 195 aa10.64□□□□□ -0.71
MSH5-201ENST00000375703 CSMD2Q7Z408 3487 aa10.63□□□□□ -0.71
MSH5-201ENST00000375703 RBMY1BA6NDE4 496 aaKnown RBP10.63□□□□□ -0.71
MSH5-201ENST00000375703 RBMY1EA6NEQ0 496 aaKnown RBP10.63□□□□□ -0.71
MSH5-201ENST00000375703 FSHBP01225 129 aa10.63□□□□□ -0.71
MSH5-201ENST00000375703 RBMY1DP0C7P1 496 aaKnown RBP10.63□□□□□ -0.71
MSH5-201ENST00000375703 IGHV3-30-3P0DP02 117 aa10.63□□□□□ -0.71
MSH5-201ENST00000375703 FAM104AQ969W3 186 aa10.63□□□□□ -0.71
MSH5-201ENST00000375703 Q9UF83 564 aa10.63□□□□□ -0.71
MSH5-201ENST00000375703 A8MTW9 85 aa10.62□□□□□ -0.71
MSH5-201ENST00000375703 MRPS36P82909 103 aaKnown RBP10.62□□□□□ -0.71
MSH5-201ENST00000375703 SHISA2Q6UWI4 295 aa10.62□□□□□ -0.71
MSH5-201ENST00000375703 ERG28Q9UKR5 140 aa10.62□□□□□ -0.71
MSH5-201ENST00000375703 A0A0J9YXY3 114 aa10.62□□□□□ -0.71
MSH5-201ENST00000375703 IGHV3-33P01772 117 aa10.62□□□□□ -0.71
MSH5-201ENST00000375703 Q6ZSN1 163 aa10.62□□□□□ -0.71
MSH5-201ENST00000375703 TMEM263Q8WUH6 116 aaKnown RBP10.62□□□□□ -0.71
MSH5-201ENST00000375703 TIMM21Q9BVV7 248 aa10.62□□□□□ -0.71
MSH5-201ENST00000375703 FLNCQ14315 2725 aa10.61□□□□□ -0.71
MSH5-201ENST00000375703 EIF4EBP3O60516 100 aaPredicted RBP10.61□□□□□ -0.71
MSH5-201ENST00000375703 IGHV4-31P0DP07 118 aa10.61□□□□□ -0.71
MSH5-201ENST00000375703 ZNF415Q09FC8 603 aa10.61□□□□□ -0.71
MSH5-201ENST00000375703 RNASE13Q5GAN3 156 aaKnown RBP10.61□□□□□ -0.71
MSH5-201ENST00000375703 TMEM61Q8N0U2 210 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms