RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 TRAV2A0A0B4J234 112 aa10.35□□□□□ -0.75
HMGCL-203ENST00000374490 SYNJ2BPP57105 145 aa10.35□□□□□ -0.75
HMGCL-203ENST00000374490 PMVKQ15126 192 aa10.35□□□□□ -0.75
HMGCL-203ENST00000374490 TRPT1Q86TN4 253 aaKnown RBP10.35□□□□□ -0.75
HMGCL-203ENST00000374490 NHP2Q9NX24 153 aaKnown RBP10.35□□□□□ -0.75
HMGCL-203ENST00000374490 TP53TG1Q9Y2A0 90 aa10.35□□□□□ -0.75
HMGCL-203ENST00000374490 ZANQ9Y493 2812 aa10.35□□□□□ -0.75
HMGCL-203ENST00000374490 SONP18583 2426 aaKnown RBP10.34□□□□□ -0.75
HMGCL-203ENST00000374490 TRBV7-3A0A075B6L6 115 aa10.34□□□□□ -0.75
HMGCL-203ENST00000374490 IGIPA6NJ69 53 aa10.34□□□□□ -0.75
HMGCL-203ENST00000374490 HOXA3O43365 443 aaPredicted RBP10.34□□□□□ -0.75
HMGCL-203ENST00000374490 HOXD3P31249 432 aaPredicted RBP10.34□□□□□ -0.75
HMGCL-203ENST00000374490 C10orf99Q6UWK7 81 aa10.34□□□□□ -0.75
HMGCL-203ENST00000374490 SDHAF1A6NFY7 115 aa10.33□□□□□ -0.76
HMGCL-203ENST00000374490 NSUN5P1Q3KNT7 163 aa10.33□□□□□ -0.76
HMGCL-203ENST00000374490 PRADC1Q9BSG0 188 aa10.33□□□□□ -0.76
HMGCL-203ENST00000374490 ZNF256Q9Y2P7 627 aaPredicted RBP10.33□□□□□ -0.76
HMGCL-203ENST00000374490 A0A087WWL8 130 aa10.33□□□□□ -0.76
HMGCL-203ENST00000374490 A0A1B0GWB2 263 aa10.33□□□□□ -0.76
HMGCL-203ENST00000374490 SCGB2A2Q13296 93 aa10.33□□□□□ -0.76
HMGCL-203ENST00000374490 Q8N1Y9 231 aa10.33□□□□□ -0.76
HMGCL-203ENST00000374490 NAA38Q9BRA0 125 aaKnown RBP10.33□□□□□ -0.76
HMGCL-203ENST00000374490 SELENOKQ9Y6D0 94 aa10.33□□□□□ -0.76
HMGCL-203ENST00000374490 TMEM238LA0A1B0GVL6 79 aa10.32□□□□□ -0.76
HMGCL-203ENST00000374490 A6NJY4 79 aa10.32□□□□□ -0.76
HMGCL-203ENST00000374490 ZNF56Q15929 161 aa10.32□□□□□ -0.76
HMGCL-203ENST00000374490 RNF151Q2KHN1 245 aa10.32□□□□□ -0.76
HMGCL-203ENST00000374490 C12orf74Q32Q52 190 aa10.32□□□□□ -0.76
HMGCL-203ENST00000374490 NEGR1Q7Z3B1 354 aa10.32□□□□□ -0.76
HMGCL-203ENST00000374490 Q8N2B8 174 aa10.32□□□□□ -0.76
HMGCL-203ENST00000374490 JPT2Q9H910 190 aa10.32□□□□□ -0.76
HMGCL-203ENST00000374490 EDA2RQ9HAV5 297 aa10.32□□□□□ -0.76
HMGCL-203ENST00000374490 A8MTW9 85 aa10.31□□□□□ -0.76
HMGCL-203ENST00000374490 IGLL5B9A064 214 aa10.31□□□□□ -0.76
HMGCL-203ENST00000374490 M0QY20 66 aa10.31□□□□□ -0.76
HMGCL-203ENST00000374490 CRYGDP07320 174 aa10.31□□□□□ -0.76
HMGCL-203ENST00000374490 SPINK13Q1W4C9 94 aa10.31□□□□□ -0.76
HMGCL-203ENST00000374490 AMTNQ6UX39 209 aa10.31□□□□□ -0.76
HMGCL-203ENST00000374490 WFDC12Q8WWY7 111 aa10.31□□□□□ -0.76
HMGCL-203ENST00000374490 IGLV4-69A0A075B6H9 119 aa10.3□□□□□ -0.76
HMGCL-203ENST00000374490 TRAV12-2A0A075B6T6 113 aa10.3□□□□□ -0.76
HMGCL-203ENST00000374490 C11orf86A6NJI1 115 aa10.3□□□□□ -0.76
HMGCL-203ENST00000374490 ZNF815PA8K554 130 aa10.3□□□□□ -0.76
HMGCL-203ENST00000374490 K7ERJ3 54 aa10.3□□□□□ -0.76
HMGCL-203ENST00000374490 TSHBP01222 138 aa10.3□□□□□ -0.76
HMGCL-203ENST00000374490 IGKV3-20P01619 116 aa10.3□□□□□ -0.76
HMGCL-203ENST00000374490 TCTEX1D4Q5JR98 221 aa10.3□□□□□ -0.76
HMGCL-203ENST00000374490 FAM74A4Q5TZK3 123 aa10.3□□□□□ -0.76
HMGCL-203ENST00000374490 VPS25Q9BRG1 176 aa10.3□□□□□ -0.76
HMGCL-203ENST00000374490 MDFICQ9P1T7 246 aa10.3□□□□□ -0.76
HMGCL-203ENST00000374490 PEMTQ9UBM1 199 aa10.3□□□□□ -0.76
HMGCL-203ENST00000374490 PCP4P48539 62 aa10.29□□□□□ -0.76
HMGCL-203ENST00000374490 KRTAP24-1Q3LI83 254 aa10.29□□□□□ -0.76
HMGCL-203ENST00000374490 PIK3CD-AS1Q5SR53 167 aa10.29□□□□□ -0.76
HMGCL-203ENST00000374490 TMEM86BQ8N661 226 aa10.29□□□□□ -0.76
HMGCL-203ENST00000374490 ZNF479Q96JC4 524 aa10.29□□□□□ -0.76
HMGCL-203ENST00000374490 PTH2Q96A98 100 aa10.29□□□□□ -0.76
HMGCL-203ENST00000374490 DUX5Q96PT3 197 aa10.29□□□□□ -0.76
HMGCL-203ENST00000374490 I3L3M4 83 aa10.28□□□□□ -0.76
HMGCL-203ENST00000374490 RRN3P1Q2M238 152 aa10.28□□□□□ -0.76
HMGCL-203ENST00000374490 ZNF876PQ49A33 203 aa10.28□□□□□ -0.76
HMGCL-203ENST00000374490 MORN3Q6PF18 240 aaPredicted RBP10.28□□□□□ -0.76
HMGCL-203ENST00000374490 SCGB1D4Q6XE38 83 aa10.28□□□□□ -0.76
HMGCL-203ENST00000374490 NFE4Q86UQ8 179 aa10.27□□□□□ -0.77
HMGCL-203ENST00000374490 C4orf3Q8WVX3 66 aa10.27□□□□□ -0.77
HMGCL-203ENST00000374490 RPL39P62891 51 aaKnown RBP10.26□□□□□ -0.77
HMGCL-203ENST00000374490 SPANXB1Q9NS25 103 aaPredicted RBP10.26□□□□□ -0.77
HMGCL-203ENST00000374490 CD300EQ496F6 205 aaPredicted RBP10.25□□□□□ -0.77
HMGCL-203ENST00000374490 C20orf203Q8NBC4 194 aa10.25□□□□□ -0.77
HMGCL-203ENST00000374490 SPAG8Q99932 426 aaPredicted RBP10.25□□□□□ -0.77
HMGCL-203ENST00000374490 LINC00467Q9BRT7 94 aa10.25□□□□□ -0.77
HMGCL-203ENST00000374490 MXRA5Q9NR99 2828 aa10.25□□□□□ -0.77
HMGCL-203ENST00000374490 MUC4Q99102 2169 aa10.25□□□□□ -0.77
HMGCL-203ENST00000374490 A8MWV9 139 aa10.25□□□□□ -0.77
HMGCL-203ENST00000374490 F8W1H4 67 aa10.25□□□□□ -0.77
HMGCL-203ENST00000374490 G3V4G9 280 aa10.25□□□□□ -0.77
HMGCL-203ENST00000374490 SLURP1P55000 103 aa10.25□□□□□ -0.77
HMGCL-203ENST00000374490 DEFB131AP59861 70 aa10.25□□□□□ -0.77
HMGCL-203ENST00000374490 ZNF415Q09FC8 603 aa10.25□□□□□ -0.77
HMGCL-203ENST00000374490 DNAJC9-AS1A6NH13 148 aa10.24□□□□□ -0.77
HMGCL-203ENST00000374490 H3BMM0 161 aa10.24□□□□□ -0.77
HMGCL-203ENST00000374490 CRYBA4P53673 196 aa10.24□□□□□ -0.77
HMGCL-203ENST00000374490 SRSF9Q13242 221 aaKnown RBP eCLIP10.24□□□□□ -0.77
HMGCL-203ENST00000374490 TMEM170BQ5T4T1 132 aa10.24□□□□□ -0.77
HMGCL-203ENST00000374490 CUBNO60494 3623 aa10.24□□□□□ -0.77
HMGCL-203ENST00000374490 KNCNA6PVL3 124 aa10.23□□□□□ -0.77
HMGCL-203ENST00000374490 M0R2P5 195 aa10.23□□□□□ -0.77
HMGCL-203ENST00000374490 LGALS3P17931 250 aaKnown RBP10.23□□□□□ -0.77
HMGCL-203ENST00000374490 LYRM7Q5U5X0 104 aa10.23□□□□□ -0.77
HMGCL-203ENST00000374490 DYNLRB2Q8TF09 96 aa10.23□□□□□ -0.77
HMGCL-203ENST00000374490 PLEKHB2Q96CS7 222 aa10.23□□□□□ -0.77
HMGCL-203ENST00000374490 A0A0J9YY99 117 aa10.22□□□□□ -0.77
HMGCL-203ENST00000374490 RHODO00212 210 aa10.22□□□□□ -0.77
HMGCL-203ENST00000374490 LEPROTO15243 131 aa10.22□□□□□ -0.77
HMGCL-203ENST00000374490 SAP30O75446 220 aa10.22□□□□□ -0.77
HMGCL-203ENST00000374490 UBE2D1P51668 147 aa10.22□□□□□ -0.77
HMGCL-203ENST00000374490 RAX2Q96IS3 184 aa10.22□□□□□ -0.77
HMGCL-203ENST00000374490 CLUHP3Q96NS8 147 aa10.22□□□□□ -0.77
HMGCL-203ENST00000374490 DUX3Q96PT4 197 aa10.22□□□□□ -0.77
HMGCL-203ENST00000374490 PYGO1Q9Y3Y4 419 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms