RNA–Protein interactions for RNA: ENST00000373831.7

RCC1-201, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 1 (best) BASIC

Gene RCC1, Length 1,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-201ENST00000373831 CIDEAO60543 219 aa10.22□□□□□ -0.77
RCC1-201ENST00000373831 SLC25A29Q8N8R3 303 aa10.22□□□□□ -0.77
RCC1-201ENST00000373831 TRGV4A0A0C4DH28 118 aa10.22□□□□□ -0.77
RCC1-201ENST00000373831 URB1-AS1Q96HZ7 61 aa10.22□□□□□ -0.77
RCC1-201ENST00000373831 LINC00310P59036 64 aa10.21□□□□□ -0.78
RCC1-201ENST00000373831 NANOS2P60321 138 aaKnown RBP10.21□□□□□ -0.78
RCC1-201ENST00000373831 Q0VG73 95 aa10.21□□□□□ -0.78
RCC1-201ENST00000373831 OR10J3Q5JRS4 329 aa10.21□□□□□ -0.78
RCC1-201ENST00000373831 LAMTOR2Q9Y2Q5 125 aa10.21□□□□□ -0.78
RCC1-201ENST00000373831 K7EQD1 137 aa10.2□□□□□ -0.78
RCC1-201ENST00000373831 ATP5G1P05496 136 aa10.2□□□□□ -0.78
RCC1-201ENST00000373831 Q6ZTC4 211 aa10.2□□□□□ -0.78
RCC1-201ENST00000373831 NEXN-AS1Q8NBZ9 246 aa10.2□□□□□ -0.78
RCC1-201ENST00000373831 C11orf45Q8TAV5 145 aa10.2□□□□□ -0.78
RCC1-201ENST00000373831 NIT2Q9NQR4 276 aa10.2□□□□□ -0.78
RCC1-201ENST00000373831 TRBV6-5A0A0K0K1A5 114 aa10.19□□□□□ -0.78
RCC1-201ENST00000373831 LOC389332A0A1B0GUA5 103 aa10.19□□□□□ -0.78
RCC1-201ENST00000373831 TRBV6-4A0A1B0GX49 114 aa10.19□□□□□ -0.78
RCC1-201ENST00000373831 PRSS47A8MTI9 375 aa10.19□□□□□ -0.78
RCC1-201ENST00000373831 H7C1H1 209 aa10.19□□□□□ -0.78
RCC1-201ENST00000373831 NDUFA6P56556 154 aa10.19□□□□□ -0.78
RCC1-201ENST00000373831 SUMO2P61956 95 aaKnown RBP10.19□□□□□ -0.78
RCC1-201ENST00000373831 IGLV2-18A0A075B6J9 118 aa10.18□□□□□ -0.78
RCC1-201ENST00000373831 LOC100131303A0A0U1RQF7 123 aa10.18□□□□□ -0.78
RCC1-201ENST00000373831 NUPR1O60356 82 aa10.18□□□□□ -0.78
RCC1-201ENST00000373831 IFI27P40305 119 aaPredicted RBP10.18□□□□□ -0.78
RCC1-201ENST00000373831 CRYBA4P53673 196 aa10.18□□□□□ -0.78
RCC1-201ENST00000373831 C20orf78Q9BR46 151 aa10.18□□□□□ -0.78
RCC1-201ENST00000373831 HHLA3Q9XRX5 114 aa10.18□□□□□ -0.78
RCC1-201ENST00000373831 PPP1R17O96001 155 aa10.18□□□□□ -0.78
RCC1-201ENST00000373831 HTN3P15516 51 aa10.18□□□□□ -0.78
RCC1-201ENST00000373831 POLR2KP53803 58 aaKnown RBP10.18□□□□□ -0.78
RCC1-201ENST00000373831 COA6Q5JTJ3 125 aaKnown RBP10.18□□□□□ -0.78
RCC1-201ENST00000373831 NEGR1Q7Z3B1 354 aa10.18□□□□□ -0.78
RCC1-201ENST00000373831 VSIG2Q96IQ7 327 aa10.18□□□□□ -0.78
RCC1-201ENST00000373831 MAP1LC3AQ9H492 121 aa10.18□□□□□ -0.78
RCC1-201ENST00000373831 ST20Q9HBF5 79 aa10.18□□□□□ -0.78
RCC1-201ENST00000373831 TRBV10-1A0A0K0K1A3 114 aa10.17□□□□□ -0.78
RCC1-201ENST00000373831 SDHAF1A6NFY7 115 aa10.17□□□□□ -0.78
RCC1-201ENST00000373831 F5H768 121 aa10.17□□□□□ -0.78
RCC1-201ENST00000373831 SERF1AO75920 110 aa10.17□□□□□ -0.78
RCC1-201ENST00000373831 NIT1Q86X76 327 aa10.17□□□□□ -0.78
RCC1-201ENST00000373831 BAGE3Q86Y29 109 aa10.17□□□□□ -0.78
RCC1-201ENST00000373831 TMEM70Q9BUB7 260 aa10.17□□□□□ -0.78
RCC1-201ENST00000373831 SMIM2Q9BVW6 85 aa10.17□□□□□ -0.78
RCC1-201ENST00000373831 PRO0255Q9UI72 69 aa10.17□□□□□ -0.78
RCC1-201ENST00000373831 RHOHQ15669 191 aa10.16□□□□□ -0.78
RCC1-201ENST00000373831 DNAJC30Q96LL9 226 aa10.16□□□□□ -0.78
RCC1-201ENST00000373831 C3orf84H3BNL1 204 aa10.15□□□□□ -0.78
RCC1-201ENST00000373831 LINC00694P0DN24 101 aa10.15□□□□□ -0.78
RCC1-201ENST00000373831 RPL32P62910 135 aaKnown RBP10.15□□□□□ -0.78
RCC1-201ENST00000373831 Q8N8P6 123 aa10.15□□□□□ -0.78
RCC1-201ENST00000373831 ZNRF2Q8NHG8 242 aa10.15□□□□□ -0.78
RCC1-201ENST00000373831 PRSS3P2Q8NHM4 247 aa10.15□□□□□ -0.78
RCC1-201ENST00000373831 DEFB104AQ8WTQ1 72 aa10.15□□□□□ -0.78
RCC1-201ENST00000373831 TNFRSF18Q9Y5U5 241 aa10.15□□□□□ -0.78
RCC1-201ENST00000373831 TRBV7-3A0A075B6L6 115 aa10.14□□□□□ -0.79
RCC1-201ENST00000373831 TRAV26-1A0A087WT03 109 aa10.14□□□□□ -0.79
RCC1-201ENST00000373831 A0A0J9YY99 117 aa10.14□□□□□ -0.79
RCC1-201ENST00000373831 TRBV27A0A0K0K1C4 114 aa10.14□□□□□ -0.79
RCC1-201ENST00000373831 GAGE12JA6NER3 117 aa10.14□□□□□ -0.79
RCC1-201ENST00000373831 LINC01546A6NGU7 62 aa10.14□□□□□ -0.79
RCC1-201ENST00000373831 PAX4O43316 350 aa10.14□□□□□ -0.79
RCC1-201ENST00000373831 GAGE1Q13065 139 aa10.14□□□□□ -0.79
RCC1-201ENST00000373831 GAGE4Q13068 117 aa10.14□□□□□ -0.79
RCC1-201ENST00000373831 GAGE5Q13069 117 aa10.14□□□□□ -0.79
RCC1-201ENST00000373831 GAGE13Q4V321 117 aa10.14□□□□□ -0.79
RCC1-201ENST00000373831 C5orf52A6NGY3 159 aa10.14□□□□□ -0.79
RCC1-201ENST00000373831 LINC00614P0C842 121 aa10.14□□□□□ -0.79
RCC1-201ENST00000373831 GYPEP15421 78 aa10.14□□□□□ -0.79
RCC1-201ENST00000373831 UBE2D3P61077 147 aa10.14□□□□□ -0.79
RCC1-201ENST00000373831 SNRPEP62304 92 aaKnown RBP10.14□□□□□ -0.79
RCC1-201ENST00000373831 UBE2D2P62837 147 aa10.14□□□□□ -0.79
RCC1-201ENST00000373831 RNASEKQ6P5S7 137 aaKnown RBP10.14□□□□□ -0.79
RCC1-201ENST00000373831 PRADC1Q9BSG0 188 aa10.14□□□□□ -0.79
RCC1-201ENST00000373831 NXT2Q9NPJ8 142 aaKnown RBP10.14□□□□□ -0.79
RCC1-201ENST00000373831 VCYO14598 125 aa10.13□□□□□ -0.79
RCC1-201ENST00000373831 TCAPO15273 167 aa10.13□□□□□ -0.79
RCC1-201ENST00000373831 S100A6P06703 90 aa10.13□□□□□ -0.79
RCC1-201ENST00000373831 ESDP10768 282 aa10.13□□□□□ -0.79
RCC1-201ENST00000373831 PMCHP20382 165 aa10.13□□□□□ -0.79
RCC1-201ENST00000373831 RPL36AP83881 106 aaKnown RBP10.13□□□□□ -0.79
RCC1-201ENST00000373831 RPL36ALQ969Q0 106 aaKnown RBP10.13□□□□□ -0.79
RCC1-201ENST00000373831 DEFB131BA0A096LNP1 70 aa10.12□□□□□ -0.79
RCC1-201ENST00000373831 IGHV3-38A0A0C4DH36 116 aa10.12□□□□□ -0.79
RCC1-201ENST00000373831 TSHBP01222 138 aa10.12□□□□□ -0.79
RCC1-201ENST00000373831 FA2HQ7L5A8 372 aa10.12□□□□□ -0.79
RCC1-201ENST00000373831 MUC7Q8TAX7 377 aa10.12□□□□□ -0.79
RCC1-201ENST00000373831 PHLDA1Q8WV24 401 aaPredicted RBP10.12□□□□□ -0.79
RCC1-201ENST00000373831 CHCHD1Q96BP2 118 aaKnown RBP10.12□□□□□ -0.79
RCC1-201ENST00000373831 RYR2Q92736 4967 aa10.11□□□□□ -0.79
RCC1-201ENST00000373831 PMCHL1Q16048 86 aa10.11□□□□□ -0.79
RCC1-201ENST00000373831 CASC10Q5T4H9 136 aa10.11□□□□□ -0.79
RCC1-201ENST00000373831 AP5S1Q9NUS5 200 aa10.11□□□□□ -0.79
RCC1-201ENST00000373831 DYNC2H1Q8NCM8 4307 aaKnown RBP10.1□□□□□ -0.79
RCC1-201ENST00000373831 A0A096LNJ9 63 aa10.1□□□□□ -0.79
RCC1-201ENST00000373831 TRAV10A0A0B4J240 114 aa10.1□□□□□ -0.79
RCC1-201ENST00000373831 I3L3M4 83 aa10.1□□□□□ -0.79
RCC1-201ENST00000373831 PDZD11Q5EBL8 140 aa10.1□□□□□ -0.79
RCC1-201ENST00000373831 HIST3H2BBQ8N257 126 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 276.5 ms