RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 TEX22C9J3V5 150 aa11.76□□□□□ -0.53
SRPK1-204ENST00000373825 CTSZQ9UBR2 303 aa11.76□□□□□ -0.53
SRPK1-204ENST00000373825 MDFICQ9P1T7 246 aa11.76□□□□□ -0.53
SRPK1-204ENST00000373825 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.76□□□□□ -0.53
SRPK1-204ENST00000373825 RPL35AP18077 110 aaKnown RBP11.76□□□□□ -0.53
SRPK1-204ENST00000373825 TMEM61Q8N0U2 210 aa11.76□□□□□ -0.53
SRPK1-204ENST00000373825 MDS2Q8NDY4 140 aa11.76□□□□□ -0.53
SRPK1-204ENST00000373825 ORMDL1Q9P0S3 153 aa11.76□□□□□ -0.53
SRPK1-204ENST00000373825 TRBV7-1A0A0A6YYK4 115 aa11.75□□□□□ -0.53
SRPK1-204ENST00000373825 FHL3Q13643 280 aa11.75□□□□□ -0.53
SRPK1-204ENST00000373825 TRGV1A0A0A0MS02 117 aa11.75□□□□□ -0.53
SRPK1-204ENST00000373825 C4orf26Q17RF5 130 aa11.75□□□□□ -0.53
SRPK1-204ENST00000373825 ZNF672Q499Z4 452 aaPredicted RBP11.75□□□□□ -0.53
SRPK1-204ENST00000373825 ZMAT4Q9H898 229 aa11.75□□□□□ -0.53
SRPK1-204ENST00000373825 ODF3Q96PU9 254 aa11.75□□□□□ -0.53
SRPK1-204ENST00000373825 U3KQE9 123 aa11.75□□□□□ -0.53
SRPK1-204ENST00000373825 BUB3O43684 328 aa11.74□□□□□ -0.53
SRPK1-204ENST00000373825 SND1-IT1Q9HBX3 110 aa11.74□□□□□ -0.53
SRPK1-204ENST00000373825 ZNF462Q96JM2 2506 aa11.74□□□□□ -0.53
SRPK1-204ENST00000373825 MIAQ16674 131 aa11.74□□□□□ -0.53
SRPK1-204ENST00000373825 NRACQ8N912 160 aa11.74□□□□□ -0.53
SRPK1-204ENST00000373825 ZNRF2Q8NHG8 242 aa11.74□□□□□ -0.53
SRPK1-204ENST00000373825 SNURFQ9Y675 71 aa11.74□□□□□ -0.53
SRPK1-204ENST00000373825 COX7A2LO14548 114 aa11.73□□□□□ -0.53
SRPK1-204ENST00000373825 PIP4P2Q8N4L2 257 aa11.73□□□□□ -0.53
SRPK1-204ENST00000373825 TMEM263Q8WUH6 116 aaKnown RBP11.73□□□□□ -0.53
SRPK1-204ENST00000373825 IGF1P05019 195 aa11.73□□□□□ -0.53
SRPK1-204ENST00000373825 MSMPQ1L6U9 139 aa11.73□□□□□ -0.53
SRPK1-204ENST00000373825 CCL21O00585 134 aa11.73□□□□□ -0.53
SRPK1-204ENST00000373825 LHBP01229 141 aa11.72□□□□□ -0.53
SRPK1-204ENST00000373825 NHLRC4P0CG21 123 aaPredicted RBP11.72□□□□□ -0.53
SRPK1-204ENST00000373825 WT1P19544 449 aaPredicted RBP11.72□□□□□ -0.53
SRPK1-204ENST00000373825 TIRAPP58753 221 aa11.72□□□□□ -0.53
SRPK1-204ENST00000373825 LST1O00453 97 aa11.72□□□□□ -0.53
SRPK1-204ENST00000373825 ENHOQ6UWT2 76 aa11.72□□□□□ -0.53
SRPK1-204ENST00000373825 MBD3L2Q8NHZ7 208 aaPredicted RBP11.72□□□□□ -0.53
SRPK1-204ENST00000373825 IGHV1-58A0A0C4DH39 117 aa11.72□□□□□ -0.53
SRPK1-204ENST00000373825 INSP01308 110 aa11.72□□□□□ -0.53
SRPK1-204ENST00000373825 WFDC9Q8NEX5 89 aa11.72□□□□□ -0.53
SRPK1-204ENST00000373825 LINC01619G3V211 115 aa11.72□□□□□ -0.53
SRPK1-204ENST00000373825 IGLV1-44P01699 117 aa11.72□□□□□ -0.53
SRPK1-204ENST00000373825 CGB3P0DN86 165 aa11.71□□□□□ -0.53
SRPK1-204ENST00000373825 CGB7P0DN87 165 aa11.71□□□□□ -0.53
SRPK1-204ENST00000373825 PIEZO2Q9H5I5 2752 aa11.71□□□□□ -0.53
SRPK1-204ENST00000373825 SLPIP03973 132 aa11.7□□□□□ -0.54
SRPK1-204ENST00000373825 KIR2DL5BQ8NHK3 375 aa11.7□□□□□ -0.54
SRPK1-204ENST00000373825 UBE2E2Q96LR5 201 aa11.7□□□□□ -0.54
SRPK1-204ENST00000373825 C20orf203Q8NBC4 194 aa11.69□□□□□ -0.54
SRPK1-204ENST00000373825 TRGV4A0A0C4DH28 118 aa11.69□□□□□ -0.54
SRPK1-204ENST00000373825 NCR3O14931 201 aa11.69□□□□□ -0.54
SRPK1-204ENST00000373825 TSPEAR-AS2P59090 65 aa11.69□□□□□ -0.54
SRPK1-204ENST00000373825 FAM110DQ8TAY7 271 aaPredicted RBP11.69□□□□□ -0.54
SRPK1-204ENST00000373825 C11orf21Q9P2W6 132 aa11.69□□□□□ -0.54
SRPK1-204ENST00000373825 IGLV11-55A0A075B6I3 123 aa11.69□□□□□ -0.54
SRPK1-204ENST00000373825 NBL1P41271 181 aa11.69□□□□□ -0.54
SRPK1-204ENST00000373825 BRD3OSQ6XYD6 125 aa11.69□□□□□ -0.54
SRPK1-204ENST00000373825 UPK3BQ9BT76 320 aa11.68□□□□□ -0.54
SRPK1-204ENST00000373825 MYO18BQ8IUG5 2567 aa11.68□□□□□ -0.54
SRPK1-204ENST00000373825 TMEM223A0PJW6 202 aa11.68□□□□□ -0.54
SRPK1-204ENST00000373825 FANCD2OSQ96PS1 177 aa11.68□□□□□ -0.54
SRPK1-204ENST00000373825 TET2Q6N021 2002 aaPredicted RBP11.67□□□□□ -0.54
SRPK1-204ENST00000373825 TIMM17BO60830 172 aa11.67□□□□□ -0.54
SRPK1-204ENST00000373825 FAM240AA0A1B0GVK7 77 aa11.66□□□□□ -0.54
SRPK1-204ENST00000373825 IGHG3P01860 377 aa11.66□□□□□ -0.54
SRPK1-204ENST00000373825 H0YGX0 51 aa11.66□□□□□ -0.54
SRPK1-204ENST00000373825 TRBV12-3P01733 135 aa11.66□□□□□ -0.54
SRPK1-204ENST00000373825 PRRC2AP48634 2157 aaKnown RBP11.66□□□□□ -0.54
SRPK1-204ENST00000373825 TTC28Q96AY4 2481 aa11.66□□□□□ -0.54
SRPK1-204ENST00000373825 LENEPQ9Y5L5 61 aa11.65□□□□□ -0.54
SRPK1-204ENST00000373825 SETD2Q9BYW2 2564 aaPredicted RBP11.65□□□□□ -0.54
SRPK1-204ENST00000373825 PIK3CD-AS1Q5SR53 167 aa11.65□□□□□ -0.54
SRPK1-204ENST00000373825 LY6G6EA0A0G2JKS1 128 aa11.65□□□□□ -0.54
SRPK1-204ENST00000373825 U3KQA8 63 aa11.65□□□□□ -0.54
SRPK1-204ENST00000373825 NDUFC2-KCTD14E9PQ53 114 aa11.65□□□□□ -0.55
SRPK1-204ENST00000373825 SAA4P35542 130 aa11.65□□□□□ -0.55
SRPK1-204ENST00000373825 DEFB131AP59861 70 aa11.64□□□□□ -0.55
SRPK1-204ENST00000373825 MIR7-3HGQ8N6C7 128 aa11.64□□□□□ -0.55
SRPK1-204ENST00000373825 COX7B2Q8TF08 81 aa11.64□□□□□ -0.55
SRPK1-204ENST00000373825 CDKN2A-AS1Q9UH64 79 aa11.64□□□□□ -0.55
SRPK1-204ENST00000373825 SOSTDC1Q6X4U4 206 aa11.64□□□□□ -0.55
SRPK1-204ENST00000373825 LAMA2P24043 3122 aaKnown RBP11.64□□□□□ -0.55
SRPK1-204ENST00000373825 CFHR3Q02985 330 aa11.64□□□□□ -0.55
SRPK1-204ENST00000373825 C5orf38Q86SI9 138 aa11.64□□□□□ -0.55
SRPK1-204ENST00000373825 SPTSSBQ8NFR3 76 aa11.64□□□□□ -0.55
SRPK1-204ENST00000373825 C9orf47Q6ZRZ4 202 aa11.64□□□□□ -0.55
SRPK1-204ENST00000373825 MINOS1Q5TGZ0 78 aa11.63□□□□□ -0.55
SRPK1-204ENST00000373825 VSIG2Q96IQ7 327 aa11.63□□□□□ -0.55
SRPK1-204ENST00000373825 ZNF580Q9UK33 172 aa11.63□□□□□ -0.55
SRPK1-204ENST00000373825 E7EQL1 145 aa11.63□□□□□ -0.55
SRPK1-204ENST00000373825 SCXQ7RTU7 201 aa11.63□□□□□ -0.55
SRPK1-204ENST00000373825 J3QLI3 93 aa11.62□□□□□ -0.55
SRPK1-204ENST00000373825 SEC61GP60059 68 aa11.62□□□□□ -0.55
SRPK1-204ENST00000373825 MRPL55Q7Z7F7 128 aaKnown RBP11.62□□□□□ -0.55
SRPK1-204ENST00000373825 CACNA1AO00555 2505 aa11.62□□□□□ -0.55
SRPK1-204ENST00000373825 MBD3L4A6NDZ8 208 aaPredicted RBP11.62□□□□□ -0.55
SRPK1-204ENST00000373825 MBD3L3A6NE82 208 aaPredicted RBP11.62□□□□□ -0.55
SRPK1-204ENST00000373825 MBD3L5A6NJ08 208 aaPredicted RBP11.62□□□□□ -0.55
SRPK1-204ENST00000373825 WISP2O76076 250 aa11.62□□□□□ -0.55
SRPK1-204ENST00000373825 HIST2H2BCQ6DN03 193 aa11.62□□□□□ -0.55
SRPK1-204ENST00000373825 HIST2H2BDQ6DRA6 164 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms