RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 SORL1Q92673 2214 aa12.28□□□□□ -0.44
HDAC8-206ENST00000373571 H3BMM0 161 aa12.28□□□□□ -0.44
HDAC8-206ENST00000373571 UBR5O95071 2799 aaPredicted RBP12.28□□□□□ -0.44
HDAC8-206ENST00000373571 I3L3M4 83 aa12.28□□□□□ -0.44
HDAC8-206ENST00000373571 TMEM170BQ5T4T1 132 aa12.28□□□□□ -0.44
HDAC8-206ENST00000373571 TMEM61Q8N0U2 210 aa12.28□□□□□ -0.44
HDAC8-206ENST00000373571 ZNRF2Q8NHG8 242 aa12.28□□□□□ -0.44
HDAC8-206ENST00000373571 C4orf3Q8WVX3 66 aa12.28□□□□□ -0.44
HDAC8-206ENST00000373571 ZFYVE26Q68DK2 2539 aa12.27□□□□□ -0.44
HDAC8-206ENST00000373571 A0A1B0GWB2 263 aa12.27□□□□□ -0.45
HDAC8-206ENST00000373571 RBMY1BA6NDE4 496 aaKnown RBP12.27□□□□□ -0.45
HDAC8-206ENST00000373571 RBMY1EA6NEQ0 496 aaKnown RBP12.27□□□□□ -0.45
HDAC8-206ENST00000373571 A8MTW9 85 aa12.27□□□□□ -0.45
HDAC8-206ENST00000373571 RBMY1DP0C7P1 496 aaKnown RBP12.27□□□□□ -0.45
HDAC8-206ENST00000373571 P0DMU3 169 aa12.27□□□□□ -0.45
HDAC8-206ENST00000373571 FAM231AP0DMU4 169 aa12.27□□□□□ -0.45
HDAC8-206ENST00000373571 FAM231CP0DMU5 169 aa12.27□□□□□ -0.45
HDAC8-206ENST00000373571 OPRPNQ99935 248 aaPredicted RBP12.26□□□□□ -0.45
HDAC8-206ENST00000373571 LRRK2Q5S007 2527 aa12.26□□□□□ -0.45
HDAC8-206ENST00000373571 TRAV2A0A0B4J234 112 aa12.26□□□□□ -0.45
HDAC8-206ENST00000373571 C21orf62-AS1Q17RA5 79 aa12.26□□□□□ -0.45
HDAC8-206ENST00000373571 C20orf203Q8NBC4 194 aa12.26□□□□□ -0.45
HDAC8-206ENST00000373571 IGHV3-73A0A0B4J1V6 119 aa12.25□□□□□ -0.45
HDAC8-206ENST00000373571 SRSF9Q13242 221 aaKnown RBP eCLIP12.25□□□□□ -0.45
HDAC8-206ENST00000373571 RRN3P1Q2M238 152 aa12.25□□□□□ -0.45
HDAC8-206ENST00000373571 DLX4Q92988 240 aaPredicted RBP12.25□□□□□ -0.45
HDAC8-206ENST00000373571 CENPEQ02224 2701 aa12.25□□□□□ -0.45
HDAC8-206ENST00000373571 DYNLRB2Q8TF09 96 aa12.25□□□□□ -0.45
HDAC8-206ENST00000373571 PRM2P04554 102 aa12.24□□□□□ -0.45
HDAC8-206ENST00000373571 TSPEAR-AS2P59090 65 aa12.24□□□□□ -0.45
HDAC8-206ENST00000373571 HIST2H2BDQ6DRA6 164 aa12.24□□□□□ -0.45
HDAC8-206ENST00000373571 KRTAP1-3Q8IUG1 177 aa12.24□□□□□ -0.45
HDAC8-206ENST00000373571 MAP6D1Q9H9H5 199 aa12.24□□□□□ -0.45
HDAC8-206ENST00000373571 TMEM238LA0A1B0GVL6 79 aa12.23□□□□□ -0.45
HDAC8-206ENST00000373571 A6NJY4 79 aa12.23□□□□□ -0.45
HDAC8-206ENST00000373571 NFE4Q86UQ8 179 aa12.23□□□□□ -0.45
HDAC8-206ENST00000373571 EDA2RQ9HAV5 297 aa12.23□□□□□ -0.45
HDAC8-206ENST00000373571 PTPN13Q12923 2485 aa12.23□□□□□ -0.45
HDAC8-206ENST00000373571 A0A0J9YY99 117 aa12.23□□□□□ -0.45
HDAC8-206ENST00000373571 PROK1P58294 105 aa12.23□□□□□ -0.45
HDAC8-206ENST00000373571 SPAG8Q99932 426 aaPredicted RBP12.23□□□□□ -0.45
HDAC8-206ENST00000373571 M0R2P5 195 aa12.22□□□□□ -0.45
HDAC8-206ENST00000373571 G3V4G9 280 aa12.22□□□□□ -0.45
HDAC8-206ENST00000373571 ZNF415Q09FC8 603 aa12.22□□□□□ -0.45
HDAC8-206ENST00000373571 TEX15Q9BXT5 2789 aa12.21□□□□□ -0.45
HDAC8-206ENST00000373571 NAV2Q8IVL1 2488 aa12.21□□□□□ -0.45
HDAC8-206ENST00000373571 A8MWV9 139 aa12.21□□□□□ -0.45
HDAC8-206ENST00000373571 DEFB114Q30KQ6 69 aa12.21□□□□□ -0.45
HDAC8-206ENST00000373571 IGLV4-3A0A075B6K6 122 aa12.2□□□□□ -0.46
HDAC8-206ENST00000373571 J3QQQ9 107 aa12.2□□□□□ -0.46
HDAC8-206ENST00000373571 PGPEP1Q9NXJ5 209 aa12.2□□□□□ -0.46
HDAC8-206ENST00000373571 ZNF469Q96JG9 3925 aaPredicted RBP12.2□□□□□ -0.46
HDAC8-206ENST00000373571 LGALS3P17931 250 aaKnown RBP12.2□□□□□ -0.46
HDAC8-206ENST00000373571 UBE2D1P51668 147 aa12.2□□□□□ -0.46
HDAC8-206ENST00000373571 RAX2Q96IS3 184 aa12.2□□□□□ -0.46
HDAC8-206ENST00000373571 VCX2Q9H322 139 aa12.2□□□□□ -0.46
HDAC8-206ENST00000373571 ABCA12Q86UK0 2595 aa12.2□□□□□ -0.46
HDAC8-206ENST00000373571 TMEM223A0PJW6 202 aa12.19□□□□□ -0.46
HDAC8-206ENST00000373571 H3BMG7 143 aa12.19□□□□□ -0.46
HDAC8-206ENST00000373571 Q6ZSV7 163 aa12.19□□□□□ -0.46
HDAC8-206ENST00000373571 TMEM86BQ8N661 226 aa12.19□□□□□ -0.46
HDAC8-206ENST00000373571 LINC01587Q99440 93 aa12.19□□□□□ -0.46
HDAC8-206ENST00000373571 MRPL16Q9NX20 251 aaKnown RBP12.19□□□□□ -0.46
HDAC8-206ENST00000373571 TNFRSF18Q9Y5U5 241 aa12.19□□□□□ -0.46
HDAC8-206ENST00000373571 CREBBPQ92793 2442 aa12.19□□□□□ -0.46
HDAC8-206ENST00000373571 AMELXQ99217 191 aa12.19□□□□□ -0.46
HDAC8-206ENST00000373571 SPANXB1Q9NS25 103 aaPredicted RBP12.19□□□□□ -0.46
HDAC8-206ENST00000373571 F8W1H4 67 aa12.18□□□□□ -0.46
HDAC8-206ENST00000373571 CD28P10747 220 aa12.18□□□□□ -0.46
HDAC8-206ENST00000373571 RPL24P83731 157 aaKnown RBP12.18□□□□□ -0.46
HDAC8-206ENST00000373571 PIK3CD-AS1Q5SR53 167 aa12.18□□□□□ -0.46
HDAC8-206ENST00000373571 AKAP9Q99996 3911 aa12.18□□□□□ -0.46
HDAC8-206ENST00000373571 A0A0J9YXV3 536 aa12.17□□□□□ -0.46
HDAC8-206ENST00000373571 LEPROTO15243 131 aa12.17□□□□□ -0.46
HDAC8-206ENST00000373571 ZNF22P17026 224 aaPredicted RBP12.17□□□□□ -0.46
HDAC8-206ENST00000373571 CFAP126Q5VTH2 177 aa12.17□□□□□ -0.46
HDAC8-206ENST00000373571 SLC25A29Q8N8R3 303 aa12.17□□□□□ -0.46
HDAC8-206ENST00000373571 NACAE9PAV3 2078 aa12.17□□□□□ -0.46
HDAC8-206ENST00000373571 RHODO00212 210 aa12.17□□□□□ -0.46
HDAC8-206ENST00000373571 INSP01308 110 aa12.17□□□□□ -0.46
HDAC8-206ENST00000373571 Q6ZSN1 163 aa12.17□□□□□ -0.46
HDAC8-206ENST00000373571 C11orf72Q8NBR9 251 aa12.17□□□□□ -0.46
HDAC8-206ENST00000373571 PTH2Q96A98 100 aa12.17□□□□□ -0.46
HDAC8-206ENST00000373571 PYGO1Q9Y3Y4 419 aa12.17□□□□□ -0.46
HDAC8-206ENST00000373571 APOMO95445 188 aa12.16□□□□□ -0.46
HDAC8-206ENST00000373571 IGHV3-30P01768 117 aa12.16□□□□□ -0.46
HDAC8-206ENST00000373571 IGHV3-30-5P0DP03 117 aa12.16□□□□□ -0.46
HDAC8-206ENST00000373571 LINC00467Q9BRT7 94 aa12.16□□□□□ -0.46
HDAC8-206ENST00000373571 Q9UF83 564 aa12.16□□□□□ -0.46
HDAC8-206ENST00000373571 IGHV3-64A0A075B6Q5 118 aa12.16□□□□□ -0.46
HDAC8-206ENST00000373571 TEX48A0A1B0GUV7 120 aa12.16□□□□□ -0.46
HDAC8-206ENST00000373571 DNAJC9-AS1A6NH13 148 aa12.16□□□□□ -0.46
HDAC8-206ENST00000373571 WFDC2Q14508 124 aa12.16□□□□□ -0.46
HDAC8-206ENST00000373571 WFDC11Q8NEX6 87 aa12.15□□□□□ -0.46
HDAC8-206ENST00000373571 TSPAN13O95857 204 aa12.14□□□□□ -0.47
HDAC8-206ENST00000373571 C11orf44Q8N8P7 122 aa12.14□□□□□ -0.47
HDAC8-206ENST00000373571 FAM104AQ969W3 186 aa12.14□□□□□ -0.47
HDAC8-206ENST00000373571 GAGE13Q4V321 117 aa12.14□□□□□ -0.47
HDAC8-206ENST00000373571 CEMP1Q6PRD7 247 aaPredicted RBP12.14□□□□□ -0.47
HDAC8-206ENST00000373571 NDUFA11Q86Y39 141 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms