RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 AGPAT4-IT1Q9H0P7 198 aa15.08■□□□□ 0.01
SYNC-201ENST00000373484 A8MZ25 164 aa15.08■□□□□ 0
SYNC-201ENST00000373484 OR11H12B2RN74 326 aa15.08■□□□□ 0
SYNC-201ENST00000373484 ERCC8Q13216 396 aa15.08■□□□□ 0
SYNC-201ENST00000373484 WFDC10AQ9H1F0 79 aa15.08■□□□□ 0
SYNC-201ENST00000373484 TMEM238C9JI98 176 aa15.07■□□□□ 0
SYNC-201ENST00000373484 PRAC2D3DTV9 90 aa15.07■□□□□ 0
SYNC-201ENST00000373484 WFDC3Q8IUB2 231 aa15.07■□□□□ 0
SYNC-201ENST00000373484 FAM110AQ9BQ89 295 aa15.07■□□□□ 0
SYNC-201ENST00000373484 J3QR89 54 aa15.06■□□□□ 0
SYNC-201ENST00000373484 GAS8-AS1O95177 125 aa15.06■□□□□ 0
SYNC-201ENST00000373484 ODF3L2Q3SX64 289 aa15.06■□□□□ 0
SYNC-201ENST00000373484 A0A1B0GWB2 263 aa15.06■□□□□ 0
SYNC-201ENST00000373484 PRB4P10163 310 aaPredicted RBP15.06■□□□□ 0
SYNC-201ENST00000373484 ORMDL2Q53FV1 153 aa15.06■□□□□ 0
SYNC-201ENST00000373484 FOXI2Q6ZQN5 318 aa15.06■□□□□ 0
SYNC-201ENST00000373484 DCANP1Q8TF63 244 aa15.06■□□□□ 0
SYNC-201ENST00000373484 NAA38Q9BRA0 125 aaKnown RBP15.06■□□□□ 0
SYNC-201ENST00000373484 MRPL35Q9NZE8 188 aaKnown RBP15.06■□□□□ 0
SYNC-201ENST00000373484 H7C1H1 209 aa15.05■□□□□ -0
SYNC-201ENST00000373484 K7EQG2 157 aa15.05■□□□□ -0
SYNC-201ENST00000373484 IGFL4Q6B9Z1 124 aa15.05■□□□□ -0
SYNC-201ENST00000373484 B9D2Q9BPU9 175 aa15.05■□□□□ -0
SYNC-201ENST00000373484 C20orf78Q9BR46 151 aa15.05■□□□□ -0
SYNC-201ENST00000373484 C11orf21Q9P2W6 132 aa15.05■□□□□ -0
SYNC-201ENST00000373484 IGLL5B9A064 214 aa15.04■□□□□ -0
SYNC-201ENST00000373484 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.04■□□□□ -0
SYNC-201ENST00000373484 DNAH9Q9NYC9 4486 aa15.04■□□□□ -0
SYNC-201ENST00000373484 TRAV8-2A0A0B4J237 113 aa15.03■□□□□ -0
SYNC-201ENST00000373484 F8VRH5 84 aa15.03■□□□□ -0
SYNC-201ENST00000373484 MED14OSP0DP75 135 aa15.03■□□□□ -0
SYNC-201ENST00000373484 LINC01549A6NIU2 74 aa15.03■□□□□ -0
SYNC-201ENST00000373484 GATA1P15976 413 aaPredicted RBP15.03■□□□□ -0
SYNC-201ENST00000373484 CMC4P56277 68 aaPredicted RBP15.03■□□□□ -0
SYNC-201ENST00000373484 TCTAP57738 103 aa15.03■□□□□ -0
SYNC-201ENST00000373484 SMIM2Q9BVW6 85 aa15.03■□□□□ -0
SYNC-201ENST00000373484 MAP6D1Q9H9H5 199 aa15.03■□□□□ -0
SYNC-201ENST00000373484 NHP2Q9NX24 153 aaKnown RBP15.03■□□□□ -0
SYNC-201ENST00000373484 PPP1R17O96001 155 aa15.02■□□□□ -0
SYNC-201ENST00000373484 M0R381 172 aa15.01□□□□□ -0.01
SYNC-201ENST00000373484 C12orf74Q32Q52 190 aa15.01□□□□□ -0.01
SYNC-201ENST00000373484 SPANXN1Q5VSR9 72 aa15.01□□□□□ -0.01
SYNC-201ENST00000373484 RNF182Q8N6D2 247 aa15.01□□□□□ -0.01
SYNC-201ENST00000373484 TOMM6Q96B49 74 aa15.01□□□□□ -0.01
SYNC-201ENST00000373484 ZNF479Q96JC4 524 aa15.01□□□□□ -0.01
SYNC-201ENST00000373484 TGP01266 2768 aa15□□□□□ -0.01
SYNC-201ENST00000373484 LINC00477Q96M19 166 aa15□□□□□ -0.01
SYNC-201ENST00000373484 COL7A1Q02388 2944 aa15□□□□□ -0.01
SYNC-201ENST00000373484 TRBV7-3A0A075B6L6 115 aa14.99□□□□□ -0.01
SYNC-201ENST00000373484 RBMY1BA6NDE4 496 aaKnown RBP14.99□□□□□ -0.01
SYNC-201ENST00000373484 RBMY1EA6NEQ0 496 aaKnown RBP14.99□□□□□ -0.01
SYNC-201ENST00000373484 RBMY1DP0C7P1 496 aaKnown RBP14.99□□□□□ -0.01
SYNC-201ENST00000373484 APRG1Q8IVJ8 170 aa14.99□□□□□ -0.01
SYNC-201ENST00000373484 TRBV7-9A0A0J9YWB2 115 aa14.99□□□□□ -0.01
SYNC-201ENST00000373484 TEX48A0A1B0GUV7 120 aa14.99□□□□□ -0.01
SYNC-201ENST00000373484 DEFB131AP59861 70 aa14.99□□□□□ -0.01
SYNC-201ENST00000373484 RPL24P83731 157 aaKnown RBP14.99□□□□□ -0.01
SYNC-201ENST00000373484 RRN3P1Q2M238 152 aa14.99□□□□□ -0.01
SYNC-201ENST00000373484 TTTY13Q9BZ97 58 aa14.99□□□□□ -0.01
SYNC-201ENST00000373484 SPANXB1Q9NS25 103 aaPredicted RBP14.99□□□□□ -0.01
SYNC-201ENST00000373484 MYMXA0A1B0GTQ4 84 aa14.98□□□□□ -0.01
SYNC-201ENST00000373484 SOCS3O14543 225 aa14.98□□□□□ -0.01
SYNC-201ENST00000373484 ZNF688P0C7X2 276 aa14.98□□□□□ -0.01
SYNC-201ENST00000373484 MAPKAPK5-AS1Q8N8E1 139 aa14.98□□□□□ -0.01
SYNC-201ENST00000373484 OR11H2Q8NH07 326 aa14.98□□□□□ -0.01
SYNC-201ENST00000373484 K7ERJ3 54 aa14.97□□□□□ -0.01
SYNC-201ENST00000373484 SBSPONQ8IVN8 264 aa14.97□□□□□ -0.01
SYNC-201ENST00000373484 HIST1H4GQ99525 98 aa14.97□□□□□ -0.01
SYNC-201ENST00000373484 AGRNO00468 2067 aa14.97□□□□□ -0.01
SYNC-201ENST00000373484 SNRPD3P62318 126 aaKnown RBP14.96□□□□□ -0.01
SYNC-201ENST00000373484 RPL32P62910 135 aaKnown RBP14.96□□□□□ -0.01
SYNC-201ENST00000373484 NEXN-AS1Q8NBZ9 246 aa14.96□□□□□ -0.01
SYNC-201ENST00000373484 SUMO2P61956 95 aaKnown RBP14.96□□□□□ -0.01
SYNC-201ENST00000373484 SAMD13Q5VXD3 122 aa14.96□□□□□ -0.01
SYNC-201ENST00000373484 SIGMAR1Q99720 223 aa14.96□□□□□ -0.01
SYNC-201ENST00000373484 DPH3P1Q9H4G8 78 aa14.96□□□□□ -0.01
SYNC-201ENST00000373484 CHTOPQ9Y3Y2 248 aaKnown RBP14.96□□□□□ -0.01
SYNC-201ENST00000373484 TRAV21A0A0B4J279 112 aa14.95□□□□□ -0.02
SYNC-201ENST00000373484 SCGB3A1Q96QR1 104 aa14.95□□□□□ -0.02
SYNC-201ENST00000373484 CIDEAO60543 219 aa14.94□□□□□ -0.02
SYNC-201ENST00000373484 POM121L12Q8N7R1 296 aa14.94□□□□□ -0.02
SYNC-201ENST00000373484 TMEM238LA0A1B0GVL6 79 aa14.94□□□□□ -0.02
SYNC-201ENST00000373484 A6NJY4 79 aa14.94□□□□□ -0.02
SYNC-201ENST00000373484 ID1P41134 155 aa14.94□□□□□ -0.02
SYNC-201ENST00000373484 SPATA25Q9BR10 227 aa14.94□□□□□ -0.02
SYNC-201ENST00000373484 NHLRC4P0CG21 123 aaPredicted RBP14.93□□□□□ -0.02
SYNC-201ENST00000373484 PAPPA-AS1Q5QFB9 102 aa14.93□□□□□ -0.02
SYNC-201ENST00000373484 C16orf92Q96LL3 132 aa14.93□□□□□ -0.02
SYNC-201ENST00000373484 HUWE1Q7Z6Z7 4374 aaKnown RBP14.92□□□□□ -0.02
SYNC-201ENST00000373484 TRAV26-2A0A0B4J265 109 aa14.92□□□□□ -0.02
SYNC-201ENST00000373484 H3BVH4 76 aa14.92□□□□□ -0.02
SYNC-201ENST00000373484 GAGE13Q4V321 117 aa14.92□□□□□ -0.02
SYNC-201ENST00000373484 ATP6V0E2Q8NHE4 81 aa14.92□□□□□ -0.02
SYNC-201ENST00000373484 RASL10AQ92737 203 aa14.92□□□□□ -0.02
SYNC-201ENST00000373484 TM2D3Q9BRN9 247 aa14.92□□□□□ -0.02
SYNC-201ENST00000373484 ASIPP42127 132 aa14.91□□□□□ -0.02
SYNC-201ENST00000373484 ZFAND2AQ8N6M9 145 aa14.91□□□□□ -0.02
SYNC-201ENST00000373484 OR10J6PQ8NGY7 276 aa14.91□□□□□ -0.02
SYNC-201ENST00000373484 PRO0461Q9UI25 63 aa14.91□□□□□ -0.02
SYNC-201ENST00000373484 NXPH4O95158 308 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms