RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 DEFB130BP0DP73 79 aa13.32□□□□□ -0.28
TRAF3IP1-201ENST00000373327 DEFB130AP0DP74 79 aa13.32□□□□□ -0.28
TRAF3IP1-201ENST00000373327 FGF6P10767 208 aa13.32□□□□□ -0.28
TRAF3IP1-201ENST00000373327 GAGE4Q13068 117 aa13.32□□□□□ -0.28
TRAF3IP1-201ENST00000373327 GAGE5Q13069 117 aa13.32□□□□□ -0.28
TRAF3IP1-201ENST00000373327 TRGV4A0A0C4DH28 118 aa13.32□□□□□ -0.28
TRAF3IP1-201ENST00000373327 C2orf91Q6ZV80 131 aa13.32□□□□□ -0.28
TRAF3IP1-201ENST00000373327 ZNRF2Q8NHG8 242 aa13.32□□□□□ -0.28
TRAF3IP1-201ENST00000373327 ITPR1Q14643 2758 aa13.31□□□□□ -0.28
TRAF3IP1-201ENST00000373327 BAALCQ8WXS3 180 aa13.31□□□□□ -0.28
TRAF3IP1-201ENST00000373327 C11orf86A6NJI1 115 aa13.31□□□□□ -0.28
TRAF3IP1-201ENST00000373327 KRTAP10-9P60411 292 aa13.3□□□□□ -0.28
TRAF3IP1-201ENST00000373327 H3BUA1 57 aa13.3□□□□□ -0.28
TRAF3IP1-201ENST00000373327 INSP01308 110 aa13.29□□□□□ -0.28
TRAF3IP1-201ENST00000373327 TIMM21Q9BVV7 248 aa13.29□□□□□ -0.28
TRAF3IP1-201ENST00000373327 I3L3M4 83 aa13.29□□□□□ -0.28
TRAF3IP1-201ENST00000373327 ELANEP08246 267 aa13.29□□□□□ -0.28
TRAF3IP1-201ENST00000373327 PROK1P58294 105 aa13.29□□□□□ -0.28
TRAF3IP1-201ENST00000373327 PIFOQ8TCI5 191 aa13.29□□□□□ -0.28
TRAF3IP1-201ENST00000373327 COX6CP09669 75 aa13.29□□□□□ -0.28
TRAF3IP1-201ENST00000373327 CHCHD5Q9BSY4 110 aa13.29□□□□□ -0.28
TRAF3IP1-201ENST00000373327 ITPR3Q14573 2671 aa13.29□□□□□ -0.28
TRAF3IP1-201ENST00000373327 IGSF10Q6WRI0 2623 aa13.28□□□□□ -0.28
TRAF3IP1-201ENST00000373327 GAGE7O76087 117 aa13.28□□□□□ -0.28
TRAF3IP1-201ENST00000373327 GAGE12FP0CL80 117 aa13.28□□□□□ -0.28
TRAF3IP1-201ENST00000373327 GAGE12GP0CL81 117 aa13.28□□□□□ -0.28
TRAF3IP1-201ENST00000373327 GAGE12IP0CL82 117 aa13.28□□□□□ -0.28
TRAF3IP1-201ENST00000373327 RPL13AP40429 203 aaKnown RBP13.28□□□□□ -0.28
TRAF3IP1-201ENST00000373327 A0A1B0GV72 72 aa13.28□□□□□ -0.28
TRAF3IP1-201ENST00000373327 J3QQQ9 107 aa13.28□□□□□ -0.28
TRAF3IP1-201ENST00000373327 SPINK8P0C7L1 97 aa13.27□□□□□ -0.28
TRAF3IP1-201ENST00000373327 CIRBPQ14011 172 aaKnown RBP13.27□□□□□ -0.28
TRAF3IP1-201ENST00000373327 A0A0J9YX75 114 aa13.27□□□□□ -0.29
TRAF3IP1-201ENST00000373327 ERG28Q9UKR5 140 aa13.27□□□□□ -0.29
TRAF3IP1-201ENST00000373327 TEX48A0A1B0GUV7 120 aa13.27□□□□□ -0.29
TRAF3IP1-201ENST00000373327 WFDC2Q14508 124 aa13.27□□□□□ -0.29
TRAF3IP1-201ENST00000373327 OR13C6PQ8NH95 151 aa13.27□□□□□ -0.29
TRAF3IP1-201ENST00000373327 U3KQK5 164 aa13.27□□□□□ -0.29
TRAF3IP1-201ENST00000373327 NRACQ8N912 160 aa13.26□□□□□ -0.29
TRAF3IP1-201ENST00000373327 ATP6V0BQ99437 205 aa13.26□□□□□ -0.29
TRAF3IP1-201ENST00000373327 U3KQE9 123 aa13.26□□□□□ -0.29
TRAF3IP1-201ENST00000373327 A0A096LPF7 62 aa13.26□□□□□ -0.29
TRAF3IP1-201ENST00000373327 RNASE3P12724 160 aaKnown RBP13.26□□□□□ -0.29
TRAF3IP1-201ENST00000373327 GPHB5Q86YW7 130 aa13.26□□□□□ -0.29
TRAF3IP1-201ENST00000373327 RNASE1P07998 156 aaKnown RBP13.25□□□□□ -0.29
TRAF3IP1-201ENST00000373327 DEFB113Q30KQ7 82 aa13.25□□□□□ -0.29
TRAF3IP1-201ENST00000373327 SRSF2Q01130 221 aaKnown RBP13.25□□□□□ -0.29
TRAF3IP1-201ENST00000373327 DLX4Q92988 240 aaPredicted RBP13.25□□□□□ -0.29
TRAF3IP1-201ENST00000373327 AZU1P20160 251 aa13.25□□□□□ -0.29
TRAF3IP1-201ENST00000373327 FOXI2Q6ZQN5 318 aa13.25□□□□□ -0.29
TRAF3IP1-201ENST00000373327 CRYBG3Q68DQ2 2970 aa13.24□□□□□ -0.29
TRAF3IP1-201ENST00000373327 DAND5Q8N907 189 aa13.24□□□□□ -0.29
TRAF3IP1-201ENST00000373327 CHD6Q8TD26 2715 aa13.24□□□□□ -0.29
TRAF3IP1-201ENST00000373327 IGLL5B9A064 214 aa13.24□□□□□ -0.29
TRAF3IP1-201ENST00000373327 C9JAW5 83 aa13.24□□□□□ -0.29
TRAF3IP1-201ENST00000373327 SIVA1O15304 175 aa13.24□□□□□ -0.29
TRAF3IP1-201ENST00000373327 RPL36AP83881 106 aaKnown RBP13.24□□□□□ -0.29
TRAF3IP1-201ENST00000373327 WFDC11Q8NEX6 87 aa13.24□□□□□ -0.29
TRAF3IP1-201ENST00000373327 RPL36ALQ969Q0 106 aaKnown RBP13.24□□□□□ -0.29
TRAF3IP1-201ENST00000373327 PLEKHB2Q96CS7 222 aa13.24□□□□□ -0.29
TRAF3IP1-201ENST00000373327 TMEM101Q96IK0 257 aa13.24□□□□□ -0.29
TRAF3IP1-201ENST00000373327 TSSC4Q9Y5U2 329 aaPredicted RBP13.24□□□□□ -0.29
TRAF3IP1-201ENST00000373327 ZANQ9Y493 2812 aa13.23□□□□□ -0.29
TRAF3IP1-201ENST00000373327 TOMM6Q96B49 74 aa13.23□□□□□ -0.29
TRAF3IP1-201ENST00000373327 NOP10Q9NPE3 64 aaKnown RBP13.22□□□□□ -0.29
TRAF3IP1-201ENST00000373327 TRAV8-3A0A0A6YYJ7 113 aa13.22□□□□□ -0.29
TRAF3IP1-201ENST00000373327 J3QLI3 93 aa13.22□□□□□ -0.29
TRAF3IP1-201ENST00000373327 TMEM238C9JI98 176 aa13.21□□□□□ -0.29
TRAF3IP1-201ENST00000373327 TMEM141Q96I45 108 aa13.21□□□□□ -0.3
TRAF3IP1-201ENST00000373327 A8MWV9 139 aa13.2□□□□□ -0.3
TRAF3IP1-201ENST00000373327 NDUFA12Q9UI09 145 aa13.2□□□□□ -0.3
TRAF3IP1-201ENST00000373327 K7EMT4 169 aa13.2□□□□□ -0.3
TRAF3IP1-201ENST00000373327 MUC4Q99102 2169 aa13.2□□□□□ -0.3
TRAF3IP1-201ENST00000373327 CCL24O00175 119 aa13.2□□□□□ -0.3
TRAF3IP1-201ENST00000373327 CSMD1Q96PZ7 3565 aa13.19□□□□□ -0.3
TRAF3IP1-201ENST00000373327 K7EQG2 157 aa13.19□□□□□ -0.3
TRAF3IP1-201ENST00000373327 PRIMA1Q86XR5 153 aa13.19□□□□□ -0.3
TRAF3IP1-201ENST00000373327 M0R2P5 195 aa13.19□□□□□ -0.3
TRAF3IP1-201ENST00000373327 PTH2Q96A98 100 aa13.19□□□□□ -0.3
TRAF3IP1-201ENST00000373327 DCHS2Q6V1P9 2916 aa13.19□□□□□ -0.3
TRAF3IP1-201ENST00000373327 PSMB8P28062 276 aa13.18□□□□□ -0.3
TRAF3IP1-201ENST00000373327 CLPSL2Q6UWE3 100 aa13.18□□□□□ -0.3
TRAF3IP1-201ENST00000373327 TEX15Q9BXT5 2789 aa13.18□□□□□ -0.3
TRAF3IP1-201ENST00000373327 SIGMAR1Q99720 223 aa13.18□□□□□ -0.3
TRAF3IP1-201ENST00000373327 USP24Q9UPU5 2620 aa13.18□□□□□ -0.3
TRAF3IP1-201ENST00000373327 GAGE6Q13070 117 aa13.18□□□□□ -0.3
TRAF3IP1-201ENST00000373327 ESM1Q9NQ30 184 aa13.18□□□□□ -0.3
TRAF3IP1-201ENST00000373327 IGHV4-31P0DP07 118 aa13.17□□□□□ -0.3
TRAF3IP1-201ENST00000373327 UTP20O75691 2785 aaKnown RBP13.17□□□□□ -0.3
TRAF3IP1-201ENST00000373327 CITED2Q99967 270 aaPredicted RBP13.17□□□□□ -0.3
TRAF3IP1-201ENST00000373327 HHLA3Q9XRX5 114 aa13.17□□□□□ -0.3
TRAF3IP1-201ENST00000373327 A4D1N5 150 aa13.16□□□□□ -0.3
TRAF3IP1-201ENST00000373327 DCANP1Q8TF63 244 aa13.16□□□□□ -0.3
TRAF3IP1-201ENST00000373327 A8MZ25 164 aa13.16□□□□□ -0.3
TRAF3IP1-201ENST00000373327 SPAG8Q99932 426 aaPredicted RBP13.16□□□□□ -0.3
TRAF3IP1-201ENST00000373327 LINC00158P58513 81 aa13.16□□□□□ -0.3
TRAF3IP1-201ENST00000373327 HELZ2Q9BYK8 2649 aaKnown RBP13.15□□□□□ -0.3
TRAF3IP1-201ENST00000373327 NEXN-AS1Q8NBZ9 246 aa13.15□□□□□ -0.3
TRAF3IP1-201ENST00000373327 CNFNQ9BYD5 112 aa13.15□□□□□ -0.3
TRAF3IP1-201ENST00000373327 PRO1854Q9UHT4 67 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms