RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 A0A087WTM6 91 aa13.41□□□□□ -0.26
TMEM53-205ENST00000372244 ZNF727A8MUV8 499 aa13.41□□□□□ -0.26
TMEM53-205ENST00000372244 GATCO43716 136 aaKnown RBP13.41□□□□□ -0.26
TMEM53-205ENST00000372244 TRGC1P0CF51 173 aa13.41□□□□□ -0.26
TMEM53-205ENST00000372244 TRBV6-8A0A0A6YYG3 113 aa13.4□□□□□ -0.26
TMEM53-205ENST00000372244 A8MWL6 223 aa13.4□□□□□ -0.26
TMEM53-205ENST00000372244 C9JQL5 133 aa13.4□□□□□ -0.26
TMEM53-205ENST00000372244 ERVFC1-1P60608 527 aa13.4□□□□□ -0.26
TMEM53-205ENST00000372244 CT83Q5H943 113 aa13.4□□□□□ -0.26
TMEM53-205ENST00000372244 DAZ4Q86SG3 579 aaKnown RBP13.4□□□□□ -0.26
TMEM53-205ENST00000372244 DAZ3Q9NR90 486 aaKnown RBP13.4□□□□□ -0.26
TMEM53-205ENST00000372244 TWIST1Q15672 202 aa13.39□□□□□ -0.27
TMEM53-205ENST00000372244 SUMO4Q6EEV6 95 aa13.39□□□□□ -0.27
TMEM53-205ENST00000372244 DNAJC30Q96LL9 226 aa13.39□□□□□ -0.27
TMEM53-205ENST00000372244 DPH3P1Q9H4G8 78 aa13.39□□□□□ -0.27
TMEM53-205ENST00000372244 PGPEP1Q9NXJ5 209 aa13.39□□□□□ -0.27
TMEM53-205ENST00000372244 DNAH5Q8TE73 4624 aa13.39□□□□□ -0.27
TMEM53-205ENST00000372244 H7C1H1 209 aa13.38□□□□□ -0.27
TMEM53-205ENST00000372244 EREGO14944 169 aa13.38□□□□□ -0.27
TMEM53-205ENST00000372244 MGPP08493 103 aa13.38□□□□□ -0.27
TMEM53-205ENST00000372244 CHCHD7Q9BUK0 85 aa13.38□□□□□ -0.27
TMEM53-205ENST00000372244 LRCOL1A6NCL2 159 aa13.37□□□□□ -0.27
TMEM53-205ENST00000372244 SRSF3P84103 164 aaKnown RBP13.37□□□□□ -0.27
TMEM53-205ENST00000372244 FAM74A3Q4VXF1 159 aa13.37□□□□□ -0.27
TMEM53-205ENST00000372244 NTM-AS1Q6ZSK4 140 aa13.37□□□□□ -0.27
TMEM53-205ENST00000372244 SMDT1Q9H4I9 107 aa13.37□□□□□ -0.27
TMEM53-205ENST00000372244 Q9HAA7 133 aa13.37□□□□□ -0.27
TMEM53-205ENST00000372244 TRAV8-3A0A0A6YYJ7 113 aa13.36□□□□□ -0.27
TMEM53-205ENST00000372244 TMEM241Q24JQ0 296 aa13.36□□□□□ -0.27
TMEM53-205ENST00000372244 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.36□□□□□ -0.27
TMEM53-205ENST00000372244 OSTCQ9NRP0 149 aa13.36□□□□□ -0.27
TMEM53-205ENST00000372244 URGCP-MRPS24S4R325 110 aa13.36□□□□□ -0.27
TMEM53-205ENST00000372244 RYR1P21817 5038 aa13.36□□□□□ -0.27
TMEM53-205ENST00000372244 PEA15Q15121 130 aa13.36□□□□□ -0.27
TMEM53-205ENST00000372244 TMEM97Q5BJF2 176 aa13.36□□□□□ -0.27
TMEM53-205ENST00000372244 RASL11AQ6T310 242 aa13.36□□□□□ -0.27
TMEM53-205ENST00000372244 FAM231BA6NCW3 169 aa13.35□□□□□ -0.27
TMEM53-205ENST00000372244 TSKUQ8WUA8 353 aa13.35□□□□□ -0.27
TMEM53-205ENST00000372244 GFRA4Q9GZZ7 299 aa13.35□□□□□ -0.27
TMEM53-205ENST00000372244 NIT2Q9NQR4 276 aa13.35□□□□□ -0.27
TMEM53-205ENST00000372244 A0A087WX48 190 aa13.34□□□□□ -0.27
TMEM53-205ENST00000372244 PSCAO43653 123 aa13.34□□□□□ -0.27
TMEM53-205ENST00000372244 CDPF1Q6NVV7 123 aa13.34□□□□□ -0.27
TMEM53-205ENST00000372244 PGLYRP4Q96LB8 373 aa13.34□□□□□ -0.27
TMEM53-205ENST00000372244 TM2D2Q9BX73 214 aa13.34□□□□□ -0.27
TMEM53-205ENST00000372244 CDK2AP2O75956 126 aa13.33□□□□□ -0.28
TMEM53-205ENST00000372244 KLK12Q9UKR0 248 aa13.33□□□□□ -0.28
TMEM53-205ENST00000372244 RPL23P62829 140 aaKnown RBP13.32□□□□□ -0.28
TMEM53-205ENST00000372244 ELOBQ15370 118 aa13.32□□□□□ -0.28
TMEM53-205ENST00000372244 GATD1Q8NB37 220 aa13.32□□□□□ -0.28
TMEM53-205ENST00000372244 FRZBQ92765 325 aa13.32□□□□□ -0.28
TMEM53-205ENST00000372244 ISOC2Q96AB3 205 aa13.32□□□□□ -0.28
TMEM53-205ENST00000372244 V9GYV3 84 aa13.32□□□□□ -0.28
TMEM53-205ENST00000372244 TMEM262E9PQX1 116 aa13.31□□□□□ -0.28
TMEM53-205ENST00000372244 FUSP35637 526 aaKnown RBP eCLIP13.31□□□□□ -0.28
TMEM53-205ENST00000372244 IQCJQ1A5X6 159 aa13.31□□□□□ -0.28
TMEM53-205ENST00000372244 HIGD1CA8MV81 97 aa13.3□□□□□ -0.28
TMEM53-205ENST00000372244 KCNIP4Q6PIL6 250 aa13.3□□□□□ -0.28
TMEM53-205ENST00000372244 MAPKAPK5-AS1Q8N8E1 139 aa13.3□□□□□ -0.28
TMEM53-205ENST00000372244 C15orf54Q8N8G6 183 aa13.3□□□□□ -0.28
TMEM53-205ENST00000372244 NAT8Q9UHE5 227 aa13.3□□□□□ -0.28
TMEM53-205ENST00000372244 HSPG2P98160 4391 aa13.3□□□□□ -0.28
TMEM53-205ENST00000372244 MPV17L2Q567V2 206 aa13.29□□□□□ -0.28
TMEM53-205ENST00000372244 SMIM15Q7Z3B0 74 aa13.29□□□□□ -0.28
TMEM53-205ENST00000372244 CHCHD5Q9BSY4 110 aa13.29□□□□□ -0.28
TMEM53-205ENST00000372244 COX11Q9Y6N1 276 aa13.29□□□□□ -0.28
TMEM53-205ENST00000372244 TRBV25-1A0A075B6N4 114 aa13.29□□□□□ -0.28
TMEM53-205ENST00000372244 TRAV26-2A0A0B4J265 109 aa13.29□□□□□ -0.28
TMEM53-205ENST00000372244 A0A1B0GUT8 65 aa13.29□□□□□ -0.28
TMEM53-205ENST00000372244 PKIAP61925 76 aa13.29□□□□□ -0.28
TMEM53-205ENST00000372244 ATRAIDQ6UW56 229 aa13.29□□□□□ -0.28
TMEM53-205ENST00000372244 IGHV1-24A0A0C4DH33 117 aa13.27□□□□□ -0.29
TMEM53-205ENST00000372244 Q0VG73 95 aa13.27□□□□□ -0.29
TMEM53-205ENST00000372244 ENHOQ6UWT2 76 aa13.27□□□□□ -0.29
TMEM53-205ENST00000372244 Q8N814 137 aa13.27□□□□□ -0.29
TMEM53-205ENST00000372244 UBE2WQ96B02 151 aa13.27□□□□□ -0.29
TMEM53-205ENST00000372244 RMI2Q96E14 147 aa13.27□□□□□ -0.29
TMEM53-205ENST00000372244 APOBP04114 4563 aaKnown RBP13.26□□□□□ -0.29
TMEM53-205ENST00000372244 ADIRFQ15847 76 aa13.26□□□□□ -0.29
TMEM53-205ENST00000372244 Q8N976 141 aa13.26□□□□□ -0.29
TMEM53-205ENST00000372244 NUP35Q8NFH5 326 aa13.26□□□□□ -0.29
TMEM53-205ENST00000372244 BORCS7Q96B45 105 aa13.26□□□□□ -0.29
TMEM53-205ENST00000372244 RBX1P62877 108 aa13.25□□□□□ -0.29
TMEM53-205ENST00000372244 WFDC2Q14508 124 aa13.25□□□□□ -0.29
TMEM53-205ENST00000372244 NTN5Q8WTR8 489 aaPredicted RBP13.25□□□□□ -0.29
TMEM53-205ENST00000372244 TMEM191AQ9H0A3 160 aa13.25□□□□□ -0.29
TMEM53-205ENST00000372244 GAGE6Q13070 117 aa13.24□□□□□ -0.29
TMEM53-205ENST00000372244 RPL39LQ96EH5 51 aaKnown RBP13.24□□□□□ -0.29
TMEM53-205ENST00000372244 KRTAP17-1Q9BYP8 105 aa13.24□□□□□ -0.29
TMEM53-205ENST00000372244 ANGP03950 147 aaKnown RBP13.23□□□□□ -0.29
TMEM53-205ENST00000372244 PRR34Q9NV39 138 aa13.23□□□□□ -0.29
TMEM53-205ENST00000372244 NAT8BQ9UHF3 227 aa13.23□□□□□ -0.29
TMEM53-205ENST00000372244 IGKV2D-24A0A075B6R9 120 aa13.23□□□□□ -0.29
TMEM53-205ENST00000372244 A0A1B0GUV1 79 aa13.23□□□□□ -0.29
TMEM53-205ENST00000372244 SMIM27A0A1W2PRY6 76 aa13.23□□□□□ -0.29
TMEM53-205ENST00000372244 KRTAP10-1P60331 282 aa13.23□□□□□ -0.29
TMEM53-205ENST00000372244 RAB14P61106 215 aa13.23□□□□□ -0.29
TMEM53-205ENST00000372244 RNF185Q96GF1 192 aa13.23□□□□□ -0.29
TMEM53-205ENST00000372244 TMEM243Q9BU79 118 aa13.23□□□□□ -0.29
TMEM53-205ENST00000372244 RAB4AP20338 218 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms