RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 NOP10Q9NPE3 64 aaKnown RBP12.58□□□□□ -0.4
SSBP3-203ENST00000371319 C20orf202A1L168 122 aa12.57□□□□□ -0.4
SSBP3-203ENST00000371319 H0Y8G0 127 aa12.57□□□□□ -0.4
SSBP3-203ENST00000371319 H7C1H1 209 aa12.57□□□□□ -0.4
SSBP3-203ENST00000371319 P0DMU3 169 aa12.57□□□□□ -0.4
SSBP3-203ENST00000371319 FAM231AP0DMU4 169 aa12.57□□□□□ -0.4
SSBP3-203ENST00000371319 FAM231CP0DMU5 169 aa12.57□□□□□ -0.4
SSBP3-203ENST00000371319 ZFP2Q6ZN57 461 aa12.57□□□□□ -0.4
SSBP3-203ENST00000371319 C18orf15Q96N68 181 aa12.57□□□□□ -0.4
SSBP3-203ENST00000371319 OVOL2Q9BRP0 275 aa12.57□□□□□ -0.4
SSBP3-203ENST00000371319 KIR2DL5BQ8NHK3 375 aa12.56□□□□□ -0.4
SSBP3-203ENST00000371319 PAM16Q9Y3D7 125 aa12.56□□□□□ -0.4
SSBP3-203ENST00000371319 TSTD3H0UI37 97 aa12.56□□□□□ -0.4
SSBP3-203ENST00000371319 IGHV3-53P01767 116 aa12.56□□□□□ -0.4
SSBP3-203ENST00000371319 OXLD1Q5BKU9 147 aa12.56□□□□□ -0.4
SSBP3-203ENST00000371319 TOMM6Q96B49 74 aa12.56□□□□□ -0.4
SSBP3-203ENST00000371319 X6R8D5 127 aa12.56□□□□□ -0.4
SSBP3-203ENST00000371319 TRAV4A0A0B4J268 109 aa12.55□□□□□ -0.4
SSBP3-203ENST00000371319 OR4C5Q8NGB2 326 aa12.55□□□□□ -0.4
SSBP3-203ENST00000371319 APOC4P55056 127 aa12.54□□□□□ -0.4
SSBP3-203ENST00000371319 KRTAP10-11P60412 298 aa12.54□□□□□ -0.4
SSBP3-203ENST00000371319 MAJINQ3KP22 176 aa12.54□□□□□ -0.4
SSBP3-203ENST00000371319 LGALS9CQ6DKI2 356 aa12.54□□□□□ -0.4
SSBP3-203ENST00000371319 ZNF479Q96JC4 524 aa12.54□□□□□ -0.4
SSBP3-203ENST00000371319 PMCHL2Q9BQD1 86 aa12.54□□□□□ -0.4
SSBP3-203ENST00000371319 Q9UF83 564 aa12.54□□□□□ -0.4
SSBP3-203ENST00000371319 TRAV9-2A0A087WT02 112 aa12.53□□□□□ -0.4
SSBP3-203ENST00000371319 LINC00587B1AMM8 73 aa12.53□□□□□ -0.4
SSBP3-203ENST00000371319 ATP5LO75964 103 aa12.53□□□□□ -0.4
SSBP3-203ENST00000371319 TSHBP01222 138 aa12.53□□□□□ -0.4
SSBP3-203ENST00000371319 SPATA45Q537H7 98 aa12.53□□□□□ -0.4
SSBP3-203ENST00000371319 NEXN-AS1Q8NBZ9 246 aa12.53□□□□□ -0.4
SSBP3-203ENST00000371319 DEFB104AQ8WTQ1 72 aa12.53□□□□□ -0.4
SSBP3-203ENST00000371319 KIR2DL4Q99706 377 aa12.53□□□□□ -0.4
SSBP3-203ENST00000371319 CMYA5Q8N3K9 4069 aa12.53□□□□□ -0.4
SSBP3-203ENST00000371319 RIPPLY3P57055 190 aa12.52□□□□□ -0.4
SSBP3-203ENST00000371319 C2orf66Q6UXQ4 117 aa12.52□□□□□ -0.4
SSBP3-203ENST00000371319 NOTCH3Q9UM47 2321 aa12.52□□□□□ -0.41
SSBP3-203ENST00000371319 SMIM9A6NGZ8 99 aa12.52□□□□□ -0.41
SSBP3-203ENST00000371319 I3L3M4 83 aa12.52□□□□□ -0.41
SSBP3-203ENST00000371319 IGHV4-30-4P0DP06 118 aa12.52□□□□□ -0.41
SSBP3-203ENST00000371319 EGFEM1PQ0D2K5 195 aa12.52□□□□□ -0.41
SSBP3-203ENST00000371319 TRRAPQ9Y4A5 3859 aa12.51□□□□□ -0.41
SSBP3-203ENST00000371319 GAGE12BA1L429 117 aa12.51□□□□□ -0.41
SSBP3-203ENST00000371319 GAGE7O76087 117 aa12.51□□□□□ -0.41
SSBP3-203ENST00000371319 GAGE12FP0CL80 117 aa12.51□□□□□ -0.41
SSBP3-203ENST00000371319 GAGE12GP0CL81 117 aa12.51□□□□□ -0.41
SSBP3-203ENST00000371319 GAGE12IP0CL82 117 aa12.51□□□□□ -0.41
SSBP3-203ENST00000371319 RHOHQ15669 191 aa12.51□□□□□ -0.41
SSBP3-203ENST00000371319 DNAJC30Q96LL9 226 aa12.51□□□□□ -0.41
SSBP3-203ENST00000371319 TNFRSF18Q9Y5U5 241 aa12.51□□□□□ -0.41
SSBP3-203ENST00000371319 DDTP30046 118 aa12.5□□□□□ -0.41
SSBP3-203ENST00000371319 SCGB3A1Q96QR1 104 aa12.5□□□□□ -0.41
SSBP3-203ENST00000371319 PRSS1P07477 247 aa12.49□□□□□ -0.41
SSBP3-203ENST00000371319 ODF1Q14990 250 aa12.49□□□□□ -0.41
SSBP3-203ENST00000371319 DEFB135Q30KP9 77 aa12.49□□□□□ -0.41
SSBP3-203ENST00000371319 TP53TG1Q9Y2A0 90 aa12.49□□□□□ -0.41
SSBP3-203ENST00000371319 hDV102S1A0JD36 115 aa12.48□□□□□ -0.41
SSBP3-203ENST00000371319 G0S2P27469 103 aa12.48□□□□□ -0.41
SSBP3-203ENST00000371319 LINC00612Q8N6U2 182 aa12.48□□□□□ -0.41
SSBP3-203ENST00000371319 DKK2Q9UBU2 259 aa12.48□□□□□ -0.41
SSBP3-203ENST00000371319 CYSLTR1Q9Y271 337 aa12.48□□□□□ -0.41
SSBP3-203ENST00000371319 TRGV2A0A075B6R0 118 aa12.47□□□□□ -0.41
SSBP3-203ENST00000371319 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.47□□□□□ -0.41
SSBP3-203ENST00000371319 K7EQD1 137 aa12.47□□□□□ -0.41
SSBP3-203ENST00000371319 EMP1P54849 157 aa12.47□□□□□ -0.41
SSBP3-203ENST00000371319 RPL39P62891 51 aaKnown RBP12.47□□□□□ -0.41
SSBP3-203ENST00000371319 ERASQ7Z444 233 aa12.47□□□□□ -0.41
SSBP3-203ENST00000371319 ZMAT4Q9H898 229 aa12.47□□□□□ -0.41
SSBP3-203ENST00000371319 LINC01549A6NIU2 74 aa12.46□□□□□ -0.42
SSBP3-203ENST00000371319 IGIPA6NJ69 53 aa12.46□□□□□ -0.42
SSBP3-203ENST00000371319 CIDEAO60543 219 aa12.46□□□□□ -0.42
SSBP3-203ENST00000371319 TRBV10-1A0A0K0K1A3 114 aa12.45□□□□□ -0.42
SSBP3-203ENST00000371319 Q6ZN92 141 aa12.45□□□□□ -0.42
SSBP3-203ENST00000371319 SLC25A29Q8N8R3 303 aa12.45□□□□□ -0.42
SSBP3-203ENST00000371319 OR11H2Q8NH07 326 aa12.45□□□□□ -0.42
SSBP3-203ENST00000371319 BAALCQ8WXS3 180 aa12.45□□□□□ -0.42
SSBP3-203ENST00000371319 MIEN1Q9BRT3 115 aa12.45□□□□□ -0.42
SSBP3-203ENST00000371319 A0A087WX48 190 aa12.44□□□□□ -0.42
SSBP3-203ENST00000371319 TRAV12-1A0A0B4J245 112 aa12.44□□□□□ -0.42
SSBP3-203ENST00000371319 IGLC3P0DOY3 106 aa12.44□□□□□ -0.42
SSBP3-203ENST00000371319 C20orf203Q8NBC4 194 aa12.44□□□□□ -0.42
SSBP3-203ENST00000371319 RNF183Q96D59 192 aa12.44□□□□□ -0.42
SSBP3-203ENST00000371319 A8MZ25 164 aa12.43□□□□□ -0.42
SSBP3-203ENST00000371319 G3V4G9 280 aa12.43□□□□□ -0.42
SSBP3-203ENST00000371319 ZNRF2Q8NHG8 242 aa12.43□□□□□ -0.42
SSBP3-203ENST00000371319 IGHV4-28A0A0C4DH34 117 aa12.43□□□□□ -0.42
SSBP3-203ENST00000371319 FHL2Q14192 279 aa12.43□□□□□ -0.42
SSBP3-203ENST00000371319 PHLDA1Q8WV24 401 aaPredicted RBP12.43□□□□□ -0.42
SSBP3-203ENST00000371319 TMEM141Q96I45 108 aa12.43□□□□□ -0.42
SSBP3-203ENST00000371319 TIMM17AQ99595 171 aa12.43□□□□□ -0.42
SSBP3-203ENST00000371319 IGHV3-38A0A0C4DH36 116 aa12.42□□□□□ -0.42
SSBP3-203ENST00000371319 HSBP1L1C9JCN9 74 aa12.42□□□□□ -0.42
SSBP3-203ENST00000371319 Q8NAQ8 132 aa12.42□□□□□ -0.42
SSBP3-203ENST00000371319 CHCHD7Q9BUK0 85 aa12.42□□□□□ -0.42
SSBP3-203ENST00000371319 MRPL35Q9NZE8 188 aaKnown RBP12.42□□□□□ -0.42
SSBP3-203ENST00000371319 ZMAT5Q9UDW3 170 aaKnown RBP12.42□□□□□ -0.42
SSBP3-203ENST00000371319 TRBV7-3A0A075B6L6 115 aa12.41□□□□□ -0.42
SSBP3-203ENST00000371319 TRBV6-4A0A1B0GX49 114 aa12.41□□□□□ -0.42
SSBP3-203ENST00000371319 IGKCP01834 107 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms