RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 Q6ZSV7 163 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 NTN5Q8WTR8 489 aaPredicted RBP6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 SPXQ9BT56 116 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 AGPAT4-IT1Q9H0P7 198 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 YAE1D1Q9NRH1 226 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 ZNF580Q9UK33 172 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 SLC25A20O43772 301 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 SYNJ2BPP57105 145 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 GAGE2BQ13066 116 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 DEFB136Q30KP8 78 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 GAGE2EQ4V326 116 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 NXT2Q9NPJ8 142 aaKnown RBP6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 GAGE2DQ9UEU5 116 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 NF1P21359 2839 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 GCN1Q92616 2671 aaKnown RBP6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 A8MWV9 139 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 C9JAW5 83 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 LAGE3Q14657 143 aa6.62□□□□□ -1.35
SMARCA1-203ENST00000371123 ZFP36P26651 326 aaKnown RBP6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 CFHR3Q02985 330 aa6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 POM121L12Q8N7R1 296 aa6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 EEF1AKMT3Q96AZ1 226 aa6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 GNLYP22749 145 aa6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 ASIPP42127 132 aa6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 RPL39P62891 51 aaKnown RBP6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 C15orf53Q8NAA6 179 aa6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 HRNRQ86YZ3 2850 aaPredicted RBP6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 TRAV8-2A0A0B4J237 113 aa6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 C11orf86A6NJI1 115 aa6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 LGALS3P17931 250 aaKnown RBP6.61□□□□□ -1.35
SMARCA1-203ENST00000371123 TRAV12-1A0A0B4J245 112 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 OOSP1A8MZH6 123 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 H7C1H1 209 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 PLNP26678 52 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 PRR9Q5T870 116 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 TMEM263Q8WUH6 116 aaKnown RBP6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 ZNF22P17026 224 aaPredicted RBP6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 SMCR5Q8TEV8 140 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 OXTP01178 125 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 ZNF876PQ49A33 203 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 Q6Q795 121 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 C10orf126Q8N4M7 172 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 ZNRF2Q8NHG8 242 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 TOMM6Q96B49 74 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 FBN2P35556 2912 aa6.6□□□□□ -1.35
SMARCA1-203ENST00000371123 DAND5Q8N907 189 aa6.59□□□□□ -1.35
SMARCA1-203ENST00000371123 IGHV3-33P01772 117 aa6.59□□□□□ -1.35
SMARCA1-203ENST00000371123 GATA4P43694 442 aa6.59□□□□□ -1.35
SMARCA1-203ENST00000371123 RHPN1-AS1Q9BWJ2 59 aa6.59□□□□□ -1.35
SMARCA1-203ENST00000371123 NBPF19A0A087WUL8 3843 aa6.59□□□□□ -1.35
SMARCA1-203ENST00000371123 EBI3Q14213 229 aa6.59□□□□□ -1.35
SMARCA1-203ENST00000371123 C10orf99Q6UWK7 81 aa6.59□□□□□ -1.35
SMARCA1-203ENST00000371123 UNQ9165/PRO28630Q6UXU0 137 aa6.59□□□□□ -1.35
SMARCA1-203ENST00000371123 TRAV41A0A0B4J266 112 aa6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 CTSGP08311 255 aa6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 EDN2P20800 178 aa6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 LYPD1Q8N2G4 141 aa6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 SUMO2P61956 95 aaKnown RBP6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 LINC01559Q495D7 138 aa6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 C2orf66Q6UXQ4 117 aa6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 LINC01600Q96MT4 127 aa6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 TP53TG1Q9Y2A0 90 aa6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 FLNAP21333 2647 aaKnown RBP6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 UBR5O95071 2799 aaPredicted RBP6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 ITPR3Q14573 2671 aa6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 DUSP14O95147 198 aaKnown RBP6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 CELSR2Q9HCU4 2923 aa6.58□□□□□ -1.36
SMARCA1-203ENST00000371123 HERVK_113P61574 105 aa6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 A4D1N5 150 aa6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 PRB1P04280 392 aa6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 MRPL23Q16540 153 aaKnown RBP6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 SLC25A29Q8N8R3 303 aa6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 Q8NA96 180 aa6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 DYNLRB2Q8TF09 96 aa6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 SNCGO76070 127 aa6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 C9orf47Q6ZRZ4 202 aa6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 FANCD2OSQ96PS1 177 aa6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 LGALS9O00182 355 aa6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 RPL13AP40429 203 aaKnown RBP6.57□□□□□ -1.36
SMARCA1-203ENST00000371123 IGHV7-81A0A0B4J1V7 117 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 H7C423 109 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 IGHV4-38-2P0DP08 117 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 GPHB5Q86YW7 130 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 NUP37Q8NFH4 326 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 SMIM2Q9BVW6 85 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 TRAV13-1A0A0B4J241 112 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 TRIAP1O43715 76 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 P0DMU3 169 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 FAM231AP0DMU4 169 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 FAM231CP0DMU5 169 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 SRSF2Q01130 221 aaKnown RBP6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 CCL19Q99731 98 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 PRO1854Q9UHT4 67 aa6.56□□□□□ -1.36
SMARCA1-203ENST00000371123 IGLV1-47P01700 117 aa6.55□□□□□ -1.36
SMARCA1-203ENST00000371123 C22orf24Q9Y442 160 aa6.55□□□□□ -1.36
SMARCA1-203ENST00000371123 TMEM262E9PQX1 116 aa6.55□□□□□ -1.36
SMARCA1-203ENST00000371123 M0R2P5 195 aa6.55□□□□□ -1.36
SMARCA1-203ENST00000371123 NPFFO15130 113 aa6.55□□□□□ -1.36
SMARCA1-203ENST00000371123 XCL2Q9UBD3 114 aa6.55□□□□□ -1.36
SMARCA1-203ENST00000371123 LINC01620Q4KN68 170 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms