RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 CASKIN1Q8WXD9 1431 aa1.44□□□□□ -2.18
RNU6-1249P-201ENST00000363237 HCG22E2RYF7 251 aa1.44□□□□□ -2.18
RNU6-1249P-201ENST00000363237 TMEM262E9PQX1 116 aa1.44□□□□□ -2.18
RNU6-1249P-201ENST00000363237 M0R143 59 aa1.44□□□□□ -2.18
RNU6-1249P-201ENST00000363237 SNRNP200O75643 2136 aaKnown RBP1.44□□□□□ -2.18
RNU6-1249P-201ENST00000363237 SIX6O95475 246 aa1.44□□□□□ -2.18
RNU6-1249P-201ENST00000363237 CAV3P56539 151 aa1.44□□□□□ -2.18
RNU6-1249P-201ENST00000363237 DCDP81605 110 aaKnown RBP1.44□□□□□ -2.18
RNU6-1249P-201ENST00000363237 BET1LQ9NYM9 111 aa1.44□□□□□ -2.18
RNU6-1249P-201ENST00000363237 ARFGEF1Q9Y6D6 1849 aa1.44□□□□□ -2.18
RNU6-1249P-201ENST00000363237 PRRC2BQ5JSZ5 2229 aaKnown RBP1.44□□□□□ -2.18
RNU6-1249P-201ENST00000363237 C10orf71Q711Q0 1435 aa1.43□□□□□ -2.18
RNU6-1249P-201ENST00000363237 CCL3L1P16619 93 aa1.43□□□□□ -2.18
RNU6-1249P-201ENST00000363237 SSBP1Q04837 148 aaKnown RBP1.43□□□□□ -2.18
RNU6-1249P-201ENST00000363237 KLKP1Q107X0 134 aa1.43□□□□□ -2.18
RNU6-1249P-201ENST00000363237 ZNF56Q15929 161 aa1.43□□□□□ -2.18
RNU6-1249P-201ENST00000363237 CCL19Q99731 98 aa1.43□□□□□ -2.18
RNU6-1249P-201ENST00000363237 CYP4F30PQ9H0H9 118 aa1.43□□□□□ -2.18
RNU6-1249P-201ENST00000363237 DPH3P1Q9H4G8 78 aa1.43□□□□□ -2.18
RNU6-1249P-201ENST00000363237 ARHGAP5Q13017 1502 aa1.43□□□□□ -2.18
RNU6-1249P-201ENST00000363237 PXDNQ92626 1479 aa1.43□□□□□ -2.18
RNU6-1249P-201ENST00000363237 TTC37Q6PGP7 1564 aa1.42□□□□□ -2.18
RNU6-1249P-201ENST00000363237 TET3O43151 1660 aa1.42□□□□□ -2.18
RNU6-1249P-201ENST00000363237 TOPAZ1Q8N9V7 1692 aa1.42□□□□□ -2.18
RNU6-1249P-201ENST00000363237 ZNF609O15014 1411 aa1.42□□□□□ -2.18
RNU6-1249P-201ENST00000363237 TRBV7-1A0A0A6YYK4 115 aa1.42□□□□□ -2.18
RNU6-1249P-201ENST00000363237 H3BQ15 152 aa1.42□□□□□ -2.18
RNU6-1249P-201ENST00000363237 FXYD1O00168 92 aa1.42□□□□□ -2.18
RNU6-1249P-201ENST00000363237 EFNA4P52798 201 aa1.42□□□□□ -2.18
RNU6-1249P-201ENST00000363237 S100A10P60903 97 aa1.42□□□□□ -2.18
RNU6-1249P-201ENST00000363237 PKIAP61925 76 aa1.42□□□□□ -2.18
RNU6-1249P-201ENST00000363237 KRTAP21-3Q3LHN1 58 aa1.42□□□□□ -2.18
RNU6-1249P-201ENST00000363237 FAM74A4Q5TZK3 123 aa1.42□□□□□ -2.18
RNU6-1249P-201ENST00000363237 KRTAP5-5Q701N2 237 aaPredicted RBP1.42□□□□□ -2.18
RNU6-1249P-201ENST00000363237 C20orf197Q8N268 126 aa1.42□□□□□ -2.18
RNU6-1249P-201ENST00000363237 LINC00208Q96KT6 92 aa1.42□□□□□ -2.18
RNU6-1249P-201ENST00000363237 ABCC10Q5T3U5 1492 aa1.42□□□□□ -2.18
RNU6-1249P-201ENST00000363237 LOC285556D6RIA3 1793 aa1.42□□□□□ -2.18
RNU6-1249P-201ENST00000363237 SIPA1L3O60292 1781 aaPredicted RBP1.42□□□□□ -2.18
RNU6-1249P-201ENST00000363237 CACNA1BQ00975 2339 aa1.41□□□□□ -2.18
RNU6-1249P-201ENST00000363237 PPIP5K1Q6PFW1 1433 aa1.41□□□□□ -2.18
RNU6-1249P-201ENST00000363237 SCRIBQ14160 1630 aa1.41□□□□□ -2.18
RNU6-1249P-201ENST00000363237 MAP2P11137 1827 aaKnown RBP1.41□□□□□ -2.18
RNU6-1249P-201ENST00000363237 TRBV30A0A0K0K1B3 111 aa1.41□□□□□ -2.18
RNU6-1249P-201ENST00000363237 RBAKDNA6NC62 111 aa1.41□□□□□ -2.18
RNU6-1249P-201ENST00000363237 C10orf99Q6UWK7 81 aa1.41□□□□□ -2.18
RNU6-1249P-201ENST00000363237 Q86TA4 180 aa1.41□□□□□ -2.18
RNU6-1249P-201ENST00000363237 MYOZ3Q8TDC0 251 aa1.41□□□□□ -2.18
RNU6-1249P-201ENST00000363237 COX7B2Q8TF08 81 aa1.41□□□□□ -2.18
RNU6-1249P-201ENST00000363237 LINC00312Q9Y6C7 94 aa1.41□□□□□ -2.18
RNU6-1249P-201ENST00000363237 HIVEP2P31629 2446 aa1.41□□□□□ -2.18
RNU6-1249P-201ENST00000363237 CHD1O14646 1710 aa1.4□□□□□ -2.18
RNU6-1249P-201ENST00000363237 SPAG17Q6Q759 2223 aa1.4□□□□□ -2.18
RNU6-1249P-201ENST00000363237 SDK1Q7Z5N4 2213 aa1.4□□□□□ -2.18
RNU6-1249P-201ENST00000363237 MED12Q93074 2177 aa1.4□□□□□ -2.19
RNU6-1249P-201ENST00000363237 TANC1Q9C0D5 1861 aa1.4□□□□□ -2.19
RNU6-1249P-201ENST00000363237 ANGP03950 147 aaKnown RBP1.4□□□□□ -2.19
RNU6-1249P-201ENST00000363237 LYNX1P0DP58 116 aa1.4□□□□□ -2.19
RNU6-1249P-201ENST00000363237 KRTAP12-4P60329 112 aa1.4□□□□□ -2.19
RNU6-1249P-201ENST00000363237 NCMAPQ5T1S8 102 aa1.4□□□□□ -2.19
RNU6-1249P-201ENST00000363237 LCE1CQ5T751 118 aa1.4□□□□□ -2.19
RNU6-1249P-201ENST00000363237 LCE1BQ5T7P3 118 aa1.4□□□□□ -2.19
RNU6-1249P-201ENST00000363237 SCAPERQ9BY12 1400 aa1.4□□□□□ -2.19
RNU6-1249P-201ENST00000363237 KIAA0100Q14667 2235 aaKnown RBP1.39□□□□□ -2.19
RNU6-1249P-201ENST00000363237 ESPL1Q14674 2120 aa1.39□□□□□ -2.19
RNU6-1249P-201ENST00000363237 PRDM2Q13029 1718 aa1.39□□□□□ -2.19
RNU6-1249P-201ENST00000363237 PSME4Q14997 1843 aa1.38□□□□□ -2.19
RNU6-1249P-201ENST00000363237 GAPVD1Q14C86 1478 aa1.38□□□□□ -2.19
RNU6-1249P-201ENST00000363237 FYCO1Q9BQS8 1478 aa1.38□□□□□ -2.19
RNU6-1249P-201ENST00000363237 SORL1Q92673 2214 aa1.38□□□□□ -2.19
RNU6-1249P-201ENST00000363237 CLPSL1A2RUU4 121 aa1.38□□□□□ -2.19
RNU6-1249P-201ENST00000363237 PRB1P04280 392 aa1.38□□□□□ -2.19
RNU6-1249P-201ENST00000363237 ELOF1P60002 83 aaKnown RBP1.38□□□□□ -2.19
RNU6-1249P-201ENST00000363237 C10orf128Q5T292 105 aa1.38□□□□□ -2.19
RNU6-1249P-201ENST00000363237 TMEM14BQ9NUH8 114 aa1.38□□□□□ -2.19
RNU6-1249P-201ENST00000363237 AP4S1Q9Y587 144 aa1.38□□□□□ -2.19
RNU6-1249P-201ENST00000363237 V9GYV3 84 aa1.38□□□□□ -2.19
RNU6-1249P-201ENST00000363237 MED13Q9UHV7 2174 aa1.38□□□□□ -2.19
RNU6-1249P-201ENST00000363237 TEX14Q8IWB6 1497 aa1.37□□□□□ -2.19
RNU6-1249P-201ENST00000363237 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.37□□□□□ -2.19
RNU6-1249P-201ENST00000363237 A0A1W2PPM0 123 aa1.37□□□□□ -2.19
RNU6-1249P-201ENST00000363237 MPC2O95563 127 aa1.37□□□□□ -2.19
RNU6-1249P-201ENST00000363237 COL5A1-AS1Q5SY13 56 aa1.37□□□□□ -2.19
RNU6-1249P-201ENST00000363237 Q6ZSA8 131 aa1.37□□□□□ -2.19
RNU6-1249P-201ENST00000363237 TROQ12816 1431 aaPredicted RBP1.37□□□□□ -2.19
RNU6-1249P-201ENST00000363237 SPTBP11277 2137 aa1.37□□□□□ -2.19
RNU6-1249P-201ENST00000363237 SNCAP37840 140 aa1.36□□□□□ -2.19
RNU6-1249P-201ENST00000363237 EDDM3BP56851 147 aa1.36□□□□□ -2.19
RNU6-1249P-201ENST00000363237 RB1CC1Q8TDY2 1594 aa1.36□□□□□ -2.19
RNU6-1249P-201ENST00000363237 LENEPQ9Y5L5 61 aa1.36□□□□□ -2.19
RNU6-1249P-201ENST00000363237 NCOA6Q14686 2063 aaPredicted RBP1.36□□□□□ -2.19
RNU6-1249P-201ENST00000363237 TECTAO75443 2155 aa1.35□□□□□ -2.19
RNU6-1249P-201ENST00000363237 TRIOBPQ9H2D6 2365 aa1.35□□□□□ -2.19
RNU6-1249P-201ENST00000363237 NAP1L6A6NFF2 107 aa1.35□□□□□ -2.19
RNU6-1249P-201ENST00000363237 LINC00032P0C843 101 aa1.35□□□□□ -2.19
RNU6-1249P-201ENST00000363237 KRTDAPP60985 99 aa1.35□□□□□ -2.19
RNU6-1249P-201ENST00000363237 SPINK13Q1W4C9 94 aa1.35□□□□□ -2.19
RNU6-1249P-201ENST00000363237 MGST2Q99735 147 aa1.35□□□□□ -2.19
RNU6-1249P-201ENST00000363237 DPY30Q9C005 99 aa1.35□□□□□ -2.19
RNU6-1249P-201ENST00000363237 LINC00474Q9P2X8 69 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms