RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 PMVKQ15126 192 aa9.23□□□□□ -0.93
UBA3-202ENST00000361055 NSD1Q96L73 2696 aaPredicted RBP9.23□□□□□ -0.93
UBA3-202ENST00000361055 FN1P02751 2386 aaKnown RBP9.23□□□□□ -0.93
UBA3-202ENST00000361055 TRBV6-5A0A0K0K1A5 114 aa9.23□□□□□ -0.93
UBA3-202ENST00000361055 MORN3Q6PF18 240 aaPredicted RBP9.23□□□□□ -0.93
UBA3-202ENST00000361055 DCANP1Q8TF63 244 aa9.23□□□□□ -0.93
UBA3-202ENST00000361055 ODF3Q96PU9 254 aa9.23□□□□□ -0.93
UBA3-202ENST00000361055 TIMM17AQ99595 171 aa9.23□□□□□ -0.93
UBA3-202ENST00000361055 KIR2DL4Q99706 377 aa9.23□□□□□ -0.93
UBA3-202ENST00000361055 TMEM238C9JI98 176 aa9.22□□□□□ -0.93
UBA3-202ENST00000361055 HERVK_113P61574 105 aa9.22□□□□□ -0.93
UBA3-202ENST00000361055 CD300EQ496F6 205 aaPredicted RBP9.22□□□□□ -0.93
UBA3-202ENST00000361055 SUMO4Q6EEV6 95 aa9.22□□□□□ -0.93
UBA3-202ENST00000361055 LCNL1Q6ZST4 164 aa9.22□□□□□ -0.93
UBA3-202ENST00000361055 PRO0461Q9UI25 63 aa9.22□□□□□ -0.93
UBA3-202ENST00000361055 IGLV4-69A0A075B6H9 119 aa9.22□□□□□ -0.93
UBA3-202ENST00000361055 TRBV27A0A0K0K1C4 114 aa9.22□□□□□ -0.93
UBA3-202ENST00000361055 LGALS9O00182 355 aa9.22□□□□□ -0.93
UBA3-202ENST00000361055 UBE2D1P51668 147 aa9.22□□□□□ -0.93
UBA3-202ENST00000361055 SRSF9Q13242 221 aaKnown RBP eCLIP9.22□□□□□ -0.93
UBA3-202ENST00000361055 TMEM95Q3KNT9 176 aa9.22□□□□□ -0.93
UBA3-202ENST00000361055 SCGB1D4Q6XE38 83 aa9.22□□□□□ -0.93
UBA3-202ENST00000361055 TP53TG1Q9Y2A0 90 aa9.22□□□□□ -0.93
UBA3-202ENST00000361055 C11orf86A6NJI1 115 aa9.21□□□□□ -0.94
UBA3-202ENST00000361055 CD7P09564 240 aa9.21□□□□□ -0.94
UBA3-202ENST00000361055 Q6ZSV7 163 aa9.21□□□□□ -0.94
UBA3-202ENST00000361055 JPT2Q9H910 190 aa9.21□□□□□ -0.94
UBA3-202ENST00000361055 AMTNQ6UX39 209 aa9.2□□□□□ -0.94
UBA3-202ENST00000361055 KLHL30-AS1Q8NEE0 82 aa9.2□□□□□ -0.94
UBA3-202ENST00000361055 PLEKHB2Q96CS7 222 aa9.2□□□□□ -0.94
UBA3-202ENST00000361055 C9orf85Q96MD7 179 aa9.2□□□□□ -0.94
UBA3-202ENST00000361055 SIGMAR1Q99720 223 aa9.2□□□□□ -0.94
UBA3-202ENST00000361055 AGRNO00468 2067 aa9.2□□□□□ -0.94
UBA3-202ENST00000361055 TRAV12-3A0A0B4J271 114 aa9.2□□□□□ -0.94
UBA3-202ENST00000361055 SDHAF1A6NFY7 115 aa9.2□□□□□ -0.94
UBA3-202ENST00000361055 F5H697 171 aa9.2□□□□□ -0.94
UBA3-202ENST00000361055 PGPEP1Q9NXJ5 209 aa9.2□□□□□ -0.94
UBA3-202ENST00000361055 IGHV3-16A0A0C4DH30 117 aa9.19□□□□□ -0.94
UBA3-202ENST00000361055 SCGB1A1P11684 91 aa9.19□□□□□ -0.94
UBA3-202ENST00000361055 ETDBQ3ZM63 59 aa9.19□□□□□ -0.94
UBA3-202ENST00000361055 SH2D6Q7Z4S9 175 aa9.19□□□□□ -0.94
UBA3-202ENST00000361055 A0A087WWL8 130 aa9.19□□□□□ -0.94
UBA3-202ENST00000361055 A0A0J9YY99 117 aa9.19□□□□□ -0.94
UBA3-202ENST00000361055 TMEM89A2RUT3 159 aa9.19□□□□□ -0.94
UBA3-202ENST00000361055 GAGE12HA6NDE8 117 aa9.19□□□□□ -0.94
UBA3-202ENST00000361055 ZNF876PQ49A33 203 aa9.19□□□□□ -0.94
UBA3-202ENST00000361055 SYT8Q8NBV8 401 aa9.19□□□□□ -0.94
UBA3-202ENST00000361055 SPAG8Q99932 426 aaPredicted RBP9.19□□□□□ -0.94
UBA3-202ENST00000361055 C16orf95Q9H693 158 aa9.19□□□□□ -0.94
UBA3-202ENST00000361055 MRPL16Q9NX20 251 aaKnown RBP9.19□□□□□ -0.94
UBA3-202ENST00000361055 PSMB8P28062 276 aa9.18□□□□□ -0.94
UBA3-202ENST00000361055 MUC4Q99102 2169 aa9.18□□□□□ -0.94
UBA3-202ENST00000361055 A0A0J9YX75 114 aa9.17□□□□□ -0.94
UBA3-202ENST00000361055 RPL39P62891 51 aaKnown RBP9.17□□□□□ -0.94
UBA3-202ENST00000361055 RHOHQ15669 191 aa9.17□□□□□ -0.94
UBA3-202ENST00000361055 SLC25A29Q8N8R3 303 aa9.17□□□□□ -0.94
UBA3-202ENST00000361055 DLX4Q92988 240 aaPredicted RBP9.17□□□□□ -0.94
UBA3-202ENST00000361055 M0QY20 66 aa9.17□□□□□ -0.94
UBA3-202ENST00000361055 NDUFA7O95182 113 aa9.17□□□□□ -0.94
UBA3-202ENST00000361055 EDN2P20800 178 aa9.17□□□□□ -0.94
UBA3-202ENST00000361055 SPATA25Q9BR10 227 aa9.17□□□□□ -0.94
UBA3-202ENST00000361055 TSSC4Q9Y5U2 329 aaPredicted RBP9.17□□□□□ -0.94
UBA3-202ENST00000361055 UBE2D3P61077 147 aa9.16□□□□□ -0.94
UBA3-202ENST00000361055 SNRPD3P62318 126 aaKnown RBP9.16□□□□□ -0.94
UBA3-202ENST00000361055 UBE2D2P62837 147 aa9.16□□□□□ -0.94
UBA3-202ENST00000361055 NFE4Q86UQ8 179 aa9.16□□□□□ -0.94
UBA3-202ENST00000361055 RNF152Q8N8N0 203 aa9.16□□□□□ -0.94
UBA3-202ENST00000361055 WFDC12Q8WWY7 111 aa9.16□□□□□ -0.94
UBA3-202ENST00000361055 K7EQG2 157 aa9.16□□□□□ -0.94
UBA3-202ENST00000361055 TSPAN13O95857 204 aa9.16□□□□□ -0.94
UBA3-202ENST00000361055 ELANEP08246 267 aa9.16□□□□□ -0.94
UBA3-202ENST00000361055 AZU1P20160 251 aa9.16□□□□□ -0.94
UBA3-202ENST00000361055 NSUN5P1Q3KNT7 163 aa9.16□□□□□ -0.94
UBA3-202ENST00000361055 TMEM170BQ5T4T1 132 aa9.16□□□□□ -0.94
UBA3-202ENST00000361055 LYRM7Q5U5X0 104 aa9.16□□□□□ -0.94
UBA3-202ENST00000361055 TRPT1Q86TN4 253 aaKnown RBP9.16□□□□□ -0.94
UBA3-202ENST00000361055 NDUFA11Q86Y39 141 aa9.16□□□□□ -0.94
UBA3-202ENST00000361055 ATP6V0E2Q8NHE4 81 aa9.16□□□□□ -0.94
UBA3-202ENST00000361055 ZNRF2Q8NHG8 242 aa9.16□□□□□ -0.94
UBA3-202ENST00000361055 LINC01006Q8NI28 216 aa9.16□□□□□ -0.94
UBA3-202ENST00000361055 MDFICQ9P1T7 246 aa9.16□□□□□ -0.94
UBA3-202ENST00000361055 IGHV1OR15-1A0A075B7D0 117 aa9.15□□□□□ -0.94
UBA3-202ENST00000361055 IGHV3-30P01768 117 aa9.15□□□□□ -0.94
UBA3-202ENST00000361055 IGHV3-30-5P0DP03 117 aa9.15□□□□□ -0.94
UBA3-202ENST00000361055 EMP1P54849 157 aa9.15□□□□□ -0.94
UBA3-202ENST00000361055 CFAP126Q5VTH2 177 aa9.15□□□□□ -0.94
UBA3-202ENST00000361055 C10orf99Q6UWK7 81 aa9.15□□□□□ -0.94
UBA3-202ENST00000361055 ZNF688P0C7X2 276 aa9.14□□□□□ -0.95
UBA3-202ENST00000361055 Q8N1Y9 231 aa9.14□□□□□ -0.95
UBA3-202ENST00000361055 J3QQQ9 107 aa9.14□□□□□ -0.95
UBA3-202ENST00000361055 FAM74A4Q5TZK3 123 aa9.14□□□□□ -0.95
UBA3-202ENST00000361055 AMELXQ99217 191 aa9.14□□□□□ -0.95
UBA3-202ENST00000361055 GTSF1LQ9H1H1 148 aa9.14□□□□□ -0.95
UBA3-202ENST00000361055 NF1P21359 2839 aa9.14□□□□□ -0.95
UBA3-202ENST00000361055 TRBV20-1A0A075B6N2 111 aa9.13□□□□□ -0.95
UBA3-202ENST00000361055 APOMO95445 188 aa9.13□□□□□ -0.95
UBA3-202ENST00000361055 CFC1BP0CG36 223 aa9.13□□□□□ -0.95
UBA3-202ENST00000361055 CFC1P0CG37 223 aa9.13□□□□□ -0.95
UBA3-202ENST00000361055 P0DMU3 169 aa9.13□□□□□ -0.95
UBA3-202ENST00000361055 FAM231AP0DMU4 169 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms