RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 CCKP06307 115 aa3.25□□□□□ -1.89
PTPN22-201ENST00000359785 Q8N2B8 174 aa3.25□□□□□ -1.89
PTPN22-201ENST00000359785 C11orf44Q8N8P7 122 aa3.25□□□□□ -1.89
PTPN22-201ENST00000359785 RPL39LQ96EH5 51 aaKnown RBP3.25□□□□□ -1.89
PTPN22-201ENST00000359785 ZNRD1Q9P1U0 126 aa3.25□□□□□ -1.89
PTPN22-201ENST00000359785 CUL9Q8IWT3 2517 aa3.25□□□□□ -1.89
PTPN22-201ENST00000359785 LY6HO94772 140 aa3.25□□□□□ -1.89
PTPN22-201ENST00000359785 PDE6GP18545 87 aa3.25□□□□□ -1.89
PTPN22-201ENST00000359785 HIST2H2BCQ6DN03 193 aa3.25□□□□□ -1.89
PTPN22-201ENST00000359785 HIST2H2BDQ6DRA6 164 aa3.25□□□□□ -1.89
PTPN22-201ENST00000359785 CR1P17927 2039 aa3.25□□□□□ -1.89
PTPN22-201ENST00000359785 IGHV4-28A0A0C4DH34 117 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 FAM236AA0A1B0GUQ0 79 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 FAM236BA0A1B0GV22 79 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 IGHV3-53P01767 116 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 ADAMTSL4-AS1Q5T5F5 129 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 ARHGAP32A7KAX9 2087 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 E7EQL1 145 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 JMJD7-PLA2G4BH0Y9G9 81 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 C9orf153Q5TBE3 101 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 SPANXN1Q5VSR9 72 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 SCGB1D4Q6XE38 83 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 RNF182Q8N6D2 247 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 Q8TAT8 98 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 DEFB127Q9H1M4 99 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 MALRD1Q5VYJ5 2156 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 TRAV7A0A075B6U4 112 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 M0R1B8 84 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 SPRY3O43610 288 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 C6orf223Q8N319 242 aa3.24□□□□□ -1.89
PTPN22-201ENST00000359785 SPTBN5Q9NRC6 3674 aaKnown RBP3.24□□□□□ -1.89
PTPN22-201ENST00000359785 K7EQG2 157 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 PLA2G2AP14555 144 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 COX17Q14061 63 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 SMIM1B2RUZ4 78 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 ENSAO43768 121 aaKnown RBP3.23□□□□□ -1.89
PTPN22-201ENST00000359785 C11orf72Q8NBR9 251 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 UNC80Q8N2C7 3258 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 A0A087WZ39 114 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 H3BVH4 76 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 H7BZZ5 65 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 KLHL30-AS1Q8NEE0 82 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 CHCHD5Q9BSY4 110 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 MOB4Q9Y3A3 225 aa3.23□□□□□ -1.89
PTPN22-201ENST00000359785 TRBV7-4A0A0J9YYF1 115 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 Q6ZRU5 148 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 DAZ4Q86SG3 579 aaKnown RBP3.22□□□□□ -1.89
PTPN22-201ENST00000359785 LINC00612Q8N6U2 182 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 DAZ1Q9NQZ3 744 aaKnown RBP3.22□□□□□ -1.89
PTPN22-201ENST00000359785 LINC00527Q9UJ94 153 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 BSPH1Q075Z2 132 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 KRTAP4-8Q9BYQ9 185 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 NDUFA12Q9UI09 145 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 IGHV3-35A0A0C4DH35 117 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 A6NDX4 124 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 GAGE2AQ6NT46 116 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 SOSTDC1Q6X4U4 206 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 PRR15Q8IV56 129 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 DAZ3Q9NR90 486 aaKnown RBP3.22□□□□□ -1.89
PTPN22-201ENST00000359785 PHLDA3Q9Y5J5 127 aa3.22□□□□□ -1.89
PTPN22-201ENST00000359785 NAV3Q8IVL0 2385 aa3.21□□□□□ -1.89
PTPN22-201ENST00000359785 C19orf84I3L1E1 186 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 C15orf32Q32M92 178 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 ATP1A1-AS1Q5TC04 95 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 C22orf34Q6ZV56 151 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 IGKV2-28A0A075B6P5 120 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 SMIM26A0A096LP01 95 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 FSHBP01225 129 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 IGKV2D-28P01615 120 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 ID1P41134 155 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 CEMP1Q6PRD7 247 aaPredicted RBP3.21□□□□□ -1.9
PTPN22-201ENST00000359785 BEX4Q9NWD9 120 aaPredicted RBP3.21□□□□□ -1.9
PTPN22-201ENST00000359785 IGHV1OR15-1A0A075B7D0 117 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 ZNF56Q15929 161 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 DUX5Q96PT3 197 aa3.21□□□□□ -1.9
PTPN22-201ENST00000359785 FXYD7P58549 80 aa3.2□□□□□ -1.9
PTPN22-201ENST00000359785 CIRBPQ14011 172 aaKnown RBP3.2□□□□□ -1.9
PTPN22-201ENST00000359785 CABIN1Q9Y6J0 2220 aa3.2□□□□□ -1.9
PTPN22-201ENST00000359785 TNCP24821 2201 aa3.2□□□□□ -1.9
PTPN22-201ENST00000359785 GVQW2A0A096LPI5 108 aaPredicted RBP3.2□□□□□ -1.9
PTPN22-201ENST00000359785 IGHV4-61A0A0C4DH41 118 aa3.2□□□□□ -1.9
PTPN22-201ENST00000359785 K7EQD1 137 aa3.2□□□□□ -1.9
PTPN22-201ENST00000359785 DLX1P56177 255 aa3.2□□□□□ -1.9
PTPN22-201ENST00000359785 J3QLI3 93 aa3.2□□□□□ -1.9
PTPN22-201ENST00000359785 LINC00242Q5T6M2 205 aa3.2□□□□□ -1.9
PTPN22-201ENST00000359785 ATP6V0E1O15342 81 aa3.19□□□□□ -1.9
PTPN22-201ENST00000359785 Q1T7F1 81 aa3.19□□□□□ -1.9
PTPN22-201ENST00000359785 FAM218AQ96MZ4 157 aa3.19□□□□□ -1.9
PTPN22-201ENST00000359785 KRTAP17-1Q9BYP8 105 aa3.19□□□□□ -1.9
PTPN22-201ENST00000359785 CYSTM1Q9H1C7 97 aa3.19□□□□□ -1.9
PTPN22-201ENST00000359785 TRBV6-4A0A1B0GX49 114 aa3.19□□□□□ -1.9
PTPN22-201ENST00000359785 USP17L23D6RBM5 183 aa3.19□□□□□ -1.9
PTPN22-201ENST00000359785 H3BTX0 84 aa3.19□□□□□ -1.9
PTPN22-201ENST00000359785 RPL39P62891 51 aaKnown RBP3.19□□□□□ -1.9
PTPN22-201ENST00000359785 TMEM86BQ8N661 226 aa3.19□□□□□ -1.9
PTPN22-201ENST00000359785 ZCCHC13Q8WW36 166 aaKnown RBP3.19□□□□□ -1.9
PTPN22-201ENST00000359785 CYP4F30PQ9H0H9 118 aa3.19□□□□□ -1.9
PTPN22-201ENST00000359785 JPT2Q9H910 190 aa3.19□□□□□ -1.9
PTPN22-201ENST00000359785 IGHV3OR16-12A0A075B7B8 117 aa3.18□□□□□ -1.9
PTPN22-201ENST00000359785 Q6ZQT0 140 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms