RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 IGKV3OR2-268A0A0C4DH90 116 aa7.59□□□□□ -1.19
RNF40-202ENST00000357890 C9orf139Q6ZV77 190 aa7.59□□□□□ -1.19
RNF40-202ENST00000357890 JPT2Q9H910 190 aa7.59□□□□□ -1.19
RNF40-202ENST00000357890 IGF1P05019 195 aa7.59□□□□□ -1.2
RNF40-202ENST00000357890 HIST1H4AP62805 103 aaKnown RBP7.59□□□□□ -1.2
RNF40-202ENST00000357890 C11orf21Q9P2W6 132 aa7.59□□□□□ -1.2
RNF40-202ENST00000357890 EBI3Q14213 229 aa7.58□□□□□ -1.2
RNF40-202ENST00000357890 TRBV10-2A0A0K0K1G8 114 aa7.58□□□□□ -1.2
RNF40-202ENST00000357890 F8W735 103 aaPredicted RBP7.58□□□□□ -1.2
RNF40-202ENST00000357890 NRACQ8N912 160 aa7.58□□□□□ -1.2
RNF40-202ENST00000357890 GATD1Q8NB37 220 aa7.58□□□□□ -1.2
RNF40-202ENST00000357890 ZFYVE26Q68DK2 2539 aa7.58□□□□□ -1.2
RNF40-202ENST00000357890 LOC107984640A0A0U1RRK4 108 aa7.58□□□□□ -1.2
RNF40-202ENST00000357890 LINC00694P0DN24 101 aa7.58□□□□□ -1.2
RNF40-202ENST00000357890 C11orf71Q6IPW1 123 aa7.58□□□□□ -1.2
RNF40-202ENST00000357890 UBE2D1P51668 147 aa7.57□□□□□ -1.2
RNF40-202ENST00000357890 CDSNQ15517 529 aa7.57□□□□□ -1.2
RNF40-202ENST00000357890 SIRPDQ9H106 197 aa7.57□□□□□ -1.2
RNF40-202ENST00000357890 NDUFA12Q9UI09 145 aa7.57□□□□□ -1.2
RNF40-202ENST00000357890 KLK5Q9Y337 293 aaPredicted RBP7.57□□□□□ -1.2
RNF40-202ENST00000357890 MOB4Q9Y3A3 225 aa7.57□□□□□ -1.2
RNF40-202ENST00000357890 IGHV3-33P01772 117 aa7.57□□□□□ -1.2
RNF40-202ENST00000357890 Q8N6K4 173 aa7.57□□□□□ -1.2
RNF40-202ENST00000357890 TMEM126AQ9H061 195 aa7.57□□□□□ -1.2
RNF40-202ENST00000357890 ICOSQ9Y6W8 199 aa7.57□□□□□ -1.2
RNF40-202ENST00000357890 UBE2D3P61077 147 aa7.57□□□□□ -1.2
RNF40-202ENST00000357890 UBE2D2P62837 147 aa7.57□□□□□ -1.2
RNF40-202ENST00000357890 OVOL1O14753 267 aa7.56□□□□□ -1.2
RNF40-202ENST00000357890 TRIAP1O43715 76 aa7.56□□□□□ -1.2
RNF40-202ENST00000357890 CCDC140Q96MF4 163 aa7.56□□□□□ -1.2
RNF40-202ENST00000357890 SLC25A29Q8N8R3 303 aa7.56□□□□□ -1.2
RNF40-202ENST00000357890 SPANXA1Q9NS26 97 aa7.56□□□□□ -1.2
RNF40-202ENST00000357890 LRBAP50851 2863 aa7.56□□□□□ -1.2
RNF40-202ENST00000357890 CENPVL3A0A0U1RRI6 287 aa7.56□□□□□ -1.2
RNF40-202ENST00000357890 OVOL3O00110 214 aa7.56□□□□□ -1.2
RNF40-202ENST00000357890 IGHV3-30P01768 117 aa7.56□□□□□ -1.2
RNF40-202ENST00000357890 IGHV3-30-5P0DP03 117 aa7.56□□□□□ -1.2
RNF40-202ENST00000357890 RHPN1-AS1Q9BWJ2 59 aa7.56□□□□□ -1.2
RNF40-202ENST00000357890 TNFRSF18Q9Y5U5 241 aa7.56□□□□□ -1.2
RNF40-202ENST00000357890 USP9XQ93008 2570 aaPredicted RBP7.55□□□□□ -1.2
RNF40-202ENST00000357890 KHDC1LQ5JSQ8 128 aa7.55□□□□□ -1.2
RNF40-202ENST00000357890 PIMREGQ9BSJ6 248 aa7.55□□□□□ -1.2
RNF40-202ENST00000357890 H3BUX3 64 aa7.55□□□□□ -1.2
RNF40-202ENST00000357890 HERVK_113P63121 156 aa7.55□□□□□ -1.2
RNF40-202ENST00000357890 TOMM7Q9P0U1 55 aa7.55□□□□□ -1.2
RNF40-202ENST00000357890 VPREB3Q9UKI3 123 aa7.55□□□□□ -1.2
RNF40-202ENST00000357890 KNCNA6PVL3 124 aa7.55□□□□□ -1.2
RNF40-202ENST00000357890 SRSF2Q01130 221 aaKnown RBP7.55□□□□□ -1.2
RNF40-202ENST00000357890 DCHS2Q6V1P9 2916 aa7.55□□□□□ -1.2
RNF40-202ENST00000357890 ZFHX3Q15911 3703 aa7.54□□□□□ -1.2
RNF40-202ENST00000357890 IGKV3D-7A0A0C4DH55 119 aa7.54□□□□□ -1.2
RNF40-202ENST00000357890 FAM223BA6NKX1 122 aa7.54□□□□□ -1.2
RNF40-202ENST00000357890 J3KT08 172 aa7.54□□□□□ -1.2
RNF40-202ENST00000357890 ZNF22P17026 224 aaPredicted RBP7.54□□□□□ -1.2
RNF40-202ENST00000357890 FAM223AQ8IWN6 122 aa7.54□□□□□ -1.2
RNF40-202ENST00000357890 TMEM141Q96I45 108 aa7.54□□□□□ -1.2
RNF40-202ENST00000357890 ZFAND3Q9H8U3 227 aa7.54□□□□□ -1.2
RNF40-202ENST00000357890 DOPEY1Q5JWR5 2465 aa7.54□□□□□ -1.2
RNF40-202ENST00000357890 LGALS9O00182 355 aa7.54□□□□□ -1.2
RNF40-202ENST00000357890 IGHG4P01861 327 aa7.54□□□□□ -1.2
RNF40-202ENST00000357890 HOXD3P31249 432 aaPredicted RBP7.54□□□□□ -1.2
RNF40-202ENST00000357890 Q6ZSV7 163 aa7.54□□□□□ -1.2
RNF40-202ENST00000357890 TRAV12-2A0A075B6T6 113 aa7.54□□□□□ -1.2
RNF40-202ENST00000357890 TRACP01848 142 aa7.54□□□□□ -1.2
RNF40-202ENST00000357890 TSPEAR-AS2P59090 65 aa7.54□□□□□ -1.2
RNF40-202ENST00000357890 UNQ9165/PRO28630Q6UXU0 137 aa7.54□□□□□ -1.2
RNF40-202ENST00000357890 MRPL53Q96EL3 112 aaKnown RBP7.54□□□□□ -1.2
RNF40-202ENST00000357890 TRBV12-3P01733 135 aa7.53□□□□□ -1.2
RNF40-202ENST00000357890 NHLRC4P0CG21 123 aaPredicted RBP7.53□□□□□ -1.2
RNF40-202ENST00000357890 COX8CQ7Z4L0 72 aa7.53□□□□□ -1.2
RNF40-202ENST00000357890 KLK9Q9UKQ9 250 aa7.53□□□□□ -1.2
RNF40-202ENST00000357890 SUMO4Q6EEV6 95 aa7.53□□□□□ -1.2
RNF40-202ENST00000357890 C9orf47Q6ZRZ4 202 aa7.53□□□□□ -1.2
RNF40-202ENST00000357890 IGHV3OR16-12A0A075B7B8 117 aa7.52□□□□□ -1.21
RNF40-202ENST00000357890 hADV29S1A0JD25 119 aa7.52□□□□□ -1.21
RNF40-202ENST00000357890 LEPROTO15243 131 aa7.52□□□□□ -1.21
RNF40-202ENST00000357890 CEMP1Q6PRD7 247 aaPredicted RBP7.52□□□□□ -1.21
RNF40-202ENST00000357890 C5orf56Q8N8D9 126 aa7.52□□□□□ -1.21
RNF40-202ENST00000357890 IGLV2-18A0A075B6J9 118 aa7.52□□□□□ -1.21
RNF40-202ENST00000357890 IGHV1-69DA0A0B4J2H0 117 aa7.52□□□□□ -1.21
RNF40-202ENST00000357890 IGHV1-69P01742 117 aa7.52□□□□□ -1.21
RNF40-202ENST00000357890 CNFNQ9BYD5 112 aa7.52□□□□□ -1.21
RNF40-202ENST00000357890 A8MZ25 164 aa7.51□□□□□ -1.21
RNF40-202ENST00000357890 LMO4P61968 165 aa7.51□□□□□ -1.21
RNF40-202ENST00000357890 SNRPD3P62318 126 aaKnown RBP7.51□□□□□ -1.21
RNF40-202ENST00000357890 IGHV3-38A0A0C4DH36 116 aa7.51□□□□□ -1.21
RNF40-202ENST00000357890 A0A1B0GX51 115 aa7.51□□□□□ -1.21
RNF40-202ENST00000357890 RHOHQ15669 191 aa7.51□□□□□ -1.21
RNF40-202ENST00000357890 C5orf47Q569G3 176 aa7.51□□□□□ -1.21
RNF40-202ENST00000357890 CCL19Q99731 98 aa7.51□□□□□ -1.21
RNF40-202ENST00000357890 IGHV7-4-1A0A0J9YVY3 117 aa7.51□□□□□ -1.21
RNF40-202ENST00000357890 ELANEP08246 267 aa7.51□□□□□ -1.21
RNF40-202ENST00000357890 SYNJ2BPP57105 145 aa7.51□□□□□ -1.21
RNF40-202ENST00000357890 USMG5Q96IX5 58 aa7.51□□□□□ -1.21
RNF40-202ENST00000357890 DAZ1Q9NQZ3 744 aaKnown RBP7.51□□□□□ -1.21
RNF40-202ENST00000357890 CLPSL1A2RUU4 121 aa7.5□□□□□ -1.21
RNF40-202ENST00000357890 BAALC-AS2P0C853 105 aa7.5□□□□□ -1.21
RNF40-202ENST00000357890 PRR9Q5T870 116 aa7.5□□□□□ -1.21
RNF40-202ENST00000357890 ZNF580Q9UK33 172 aa7.5□□□□□ -1.21
RNF40-202ENST00000357890 JMJD1CQ15652 2540 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms