RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 VCYO14598 125 aa15.17■□□□□ 0.02
COL13A1-202ENST00000357811 RRN3P1Q2M238 152 aa15.17■□□□□ 0.02
COL13A1-202ENST00000357811 LOC107984156A0A0G2JMH3 177 aa15.17■□□□□ 0.02
COL13A1-202ENST00000357811 A0A0J9YX75 114 aa15.17■□□□□ 0.02
COL13A1-202ENST00000357811 HOXA3O43365 443 aaPredicted RBP15.17■□□□□ 0.02
COL13A1-202ENST00000357811 ZNF876PQ49A33 203 aa15.17■□□□□ 0.02
COL13A1-202ENST00000357811 ARL17AQ8IVW1 177 aa15.17■□□□□ 0.02
COL13A1-202ENST00000357811 ZNRF2Q8NHG8 242 aa15.17■□□□□ 0.02
COL13A1-202ENST00000357811 ZNF469Q96JG9 3925 aaPredicted RBP15.17■□□□□ 0.02
COL13A1-202ENST00000357811 KNCNA6PVL3 124 aa15.16■□□□□ 0.02
COL13A1-202ENST00000357811 F8W1H4 67 aa15.16■□□□□ 0.02
COL13A1-202ENST00000357811 P0DMU3 169 aa15.16■□□□□ 0.02
COL13A1-202ENST00000357811 FAM231AP0DMU4 169 aa15.16■□□□□ 0.02
COL13A1-202ENST00000357811 FAM231CP0DMU5 169 aa15.16■□□□□ 0.02
COL13A1-202ENST00000357811 MORN3Q6PF18 240 aaPredicted RBP15.16■□□□□ 0.02
COL13A1-202ENST00000357811 USP24Q9UPU5 2620 aa15.16■□□□□ 0.02
COL13A1-202ENST00000357811 NXPH4O95158 308 aa15.15■□□□□ 0.02
COL13A1-202ENST00000357811 PPP1R17O96001 155 aa15.15■□□□□ 0.02
COL13A1-202ENST00000357811 PROK1P58294 105 aa15.15■□□□□ 0.02
COL13A1-202ENST00000357811 PMVKQ15126 192 aa15.15■□□□□ 0.02
COL13A1-202ENST00000357811 TAL2Q16559 108 aa15.15■□□□□ 0.02
COL13A1-202ENST00000357811 K7EMT4 169 aa15.15■□□□□ 0.02
COL13A1-202ENST00000357811 SPATA25Q9BR10 227 aa15.15■□□□□ 0.02
COL13A1-202ENST00000357811 HOXD3P31249 432 aaPredicted RBP15.14■□□□□ 0.01
COL13A1-202ENST00000357811 GAGE13Q4V321 117 aa15.14■□□□□ 0.01
COL13A1-202ENST00000357811 A0A1B0GWB2 263 aa15.13■□□□□ 0.01
COL13A1-202ENST00000357811 COX6B1P14854 86 aa15.13■□□□□ 0.01
COL13A1-202ENST00000357811 IGHV1OR15-1A0A075B7D0 117 aa15.13■□□□□ 0.01
COL13A1-202ENST00000357811 RNASE13Q5GAN3 156 aaKnown RBP15.13■□□□□ 0.01
COL13A1-202ENST00000357811 Q9UF83 564 aa15.13■□□□□ 0.01
COL13A1-202ENST00000357811 M0QY20 66 aa15.12■□□□□ 0.01
COL13A1-202ENST00000357811 BRI3O95415 125 aa15.12■□□□□ 0.01
COL13A1-202ENST00000357811 KHDC1LQ5JSQ8 128 aa15.12■□□□□ 0.01
COL13A1-202ENST00000357811 MTORP42345 2549 aa15.12■□□□□ 0.01
COL13A1-202ENST00000357811 K7EQG2 157 aa15.12■□□□□ 0.01
COL13A1-202ENST00000357811 ZNF580Q9UK33 172 aa15.12■□□□□ 0.01
COL13A1-202ENST00000357811 TRBV7-9A0A0J9YWB2 115 aa15.12■□□□□ 0.01
COL13A1-202ENST00000357811 SLURP1P55000 103 aa15.12■□□□□ 0.01
COL13A1-202ENST00000357811 RBMY1A1P0DJD3 496 aaKnown RBP15.11■□□□□ 0.01
COL13A1-202ENST00000357811 RBMY1CP0DJD4 496 aa15.11■□□□□ 0.01
COL13A1-202ENST00000357811 RBMY1FQ15415 496 aaKnown RBP15.11■□□□□ 0.01
COL13A1-202ENST00000357811 CEMP1Q6PRD7 247 aaPredicted RBP15.11■□□□□ 0.01
COL13A1-202ENST00000357811 C9orf85Q96MD7 179 aa15.11■□□□□ 0.01
COL13A1-202ENST00000357811 ACANP16112 2415 aa15.1■□□□□ 0.01
COL13A1-202ENST00000357811 POM121L12Q8N7R1 296 aa15.1■□□□□ 0.01
COL13A1-202ENST00000357811 ZNF418Q8TF45 676 aaPredicted RBP15.1■□□□□ 0.01
COL13A1-202ENST00000357811 PSMB2P49721 201 aa15.09■□□□□ 0.01
COL13A1-202ENST00000357811 HERVK_113P61574 105 aa15.09■□□□□ 0.01
COL13A1-202ENST00000357811 TCTEX1D4Q5JR98 221 aa15.09■□□□□ 0.01
COL13A1-202ENST00000357811 LINC01356Q8N9X3 169 aa15.09■□□□□ 0.01
COL13A1-202ENST00000357811 SYT8Q8NBV8 401 aa15.09■□□□□ 0.01
COL13A1-202ENST00000357811 A0A0J9YY99 117 aa15.09■□□□□ 0.01
COL13A1-202ENST00000357811 TRBV27A0A0K0K1C4 114 aa15.09■□□□□ 0.01
COL13A1-202ENST00000357811 DEFB131AP59861 70 aa15.09■□□□□ 0.01
COL13A1-202ENST00000357811 ADARB2-AS1A8MUL3 147 aa15.09■□□□□ 0.01
COL13A1-202ENST00000357811 LGALS9O00182 355 aa15.09■□□□□ 0.01
COL13A1-202ENST00000357811 H7C2G1 150 aa15.08■□□□□ 0
COL13A1-202ENST00000357811 SPINK8P0C7L1 97 aa15.08■□□□□ 0
COL13A1-202ENST00000357811 A0A0J9YXV3 536 aa15.07■□□□□ 0
COL13A1-202ENST00000357811 TSPAN13O95857 204 aa15.07■□□□□ 0
COL13A1-202ENST00000357811 PTH2Q96A98 100 aa15.06■□□□□ 0
COL13A1-202ENST00000357811 J3QQQ9 107 aa15.06■□□□□ 0
COL13A1-202ENST00000357811 LGALS3P17931 250 aaKnown RBP15.05■□□□□ 0
COL13A1-202ENST00000357811 TMEM141Q96I45 108 aa15.05■□□□□ 0
COL13A1-202ENST00000357811 TIMM17AQ99595 171 aa15.05■□□□□ 0
COL13A1-202ENST00000357811 GATA3P23771 443 aa15.05■□□□□ -0
COL13A1-202ENST00000357811 KRTAP10-9P60411 292 aa15.05■□□□□ -0
COL13A1-202ENST00000357811 C11orf44Q8N8P7 122 aa15.05■□□□□ -0
COL13A1-202ENST00000357811 A6NJY4 79 aa15.04■□□□□ -0
COL13A1-202ENST00000357811 MT-ATP8P03928 68 aa15.04■□□□□ -0
COL13A1-202ENST00000357811 RAX2Q96IS3 184 aa15.04■□□□□ -0
COL13A1-202ENST00000357811 VPREB3Q9UKI3 123 aa15.04■□□□□ -0
COL13A1-202ENST00000357811 TRPT1Q86TN4 253 aaKnown RBP15.03■□□□□ -0
COL13A1-202ENST00000357811 AKAP9Q99996 3911 aa15.03■□□□□ -0
COL13A1-202ENST00000357811 NBPF19A0A087WUL8 3843 aa15.03■□□□□ -0
COL13A1-202ENST00000357811 SPXQ9BT56 116 aa15.03■□□□□ -0
COL13A1-202ENST00000357811 ZNF702PQ9H963 129 aa15.03■□□□□ -0
COL13A1-202ENST00000357811 PRO0461Q9UI25 63 aa15.03■□□□□ -0
COL13A1-202ENST00000357811 TRAV2A0A0B4J234 112 aa15.03■□□□□ -0
COL13A1-202ENST00000357811 SS18L2Q9UHA2 77 aa15.03■□□□□ -0
COL13A1-202ENST00000357811 APCP25054 2843 aa15.03■□□□□ -0
COL13A1-202ENST00000357811 ITPR3Q14573 2671 aa15.02■□□□□ -0
COL13A1-202ENST00000357811 UBE2D1P51668 147 aa15.02■□□□□ -0
COL13A1-202ENST00000357811 FLNAP21333 2647 aaKnown RBP15.02□□□□□ -0.01
COL13A1-202ENST00000357811 IGHV3-38A0A0C4DH36 116 aa15.02□□□□□ -0.01
COL13A1-202ENST00000357811 VCX2Q9H322 139 aa15.02□□□□□ -0.01
COL13A1-202ENST00000357811 TRBV6-5A0A0K0K1A5 114 aa15.01□□□□□ -0.01
COL13A1-202ENST00000357811 PAPPA-AS1Q5QFB9 102 aa15.01□□□□□ -0.01
COL13A1-202ENST00000357811 NDUFA11Q86Y39 141 aa15.01□□□□□ -0.01
COL13A1-202ENST00000357811 C20orf203Q8NBC4 194 aa15.01□□□□□ -0.01
COL13A1-202ENST00000357811 CFC1BP0CG36 223 aa15.01□□□□□ -0.01
COL13A1-202ENST00000357811 CFC1P0CG37 223 aa15.01□□□□□ -0.01
COL13A1-202ENST00000357811 RPL32P62910 135 aaKnown RBP15.01□□□□□ -0.01
COL13A1-202ENST00000357811 RNF183Q96D59 192 aa15.01□□□□□ -0.01
COL13A1-202ENST00000357811 I3L3M4 83 aa15□□□□□ -0.01
COL13A1-202ENST00000357811 FOXI1Q12951 378 aa15□□□□□ -0.01
COL13A1-202ENST00000357811 LINC01619G3V211 115 aa15□□□□□ -0.01
COL13A1-202ENST00000357811 IGHV3-30P01768 117 aa15□□□□□ -0.01
COL13A1-202ENST00000357811 IGHV3-30-5P0DP03 117 aa15□□□□□ -0.01
COL13A1-202ENST00000357811 Q6ZSN1 163 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms