RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 GAGE12GP0CL81 117 aa12.93□□□□□ -0.34
SMARCD3-202ENST00000356800 GAGE12IP0CL82 117 aa12.93□□□□□ -0.34
SMARCD3-202ENST00000356800 DEFB121Q5J5C9 76 aa12.93□□□□□ -0.34
SMARCD3-202ENST00000356800 SMIM6P0DI80 62 aa12.93□□□□□ -0.34
SMARCD3-202ENST00000356800 ZFP2Q6ZN57 461 aa12.93□□□□□ -0.34
SMARCD3-202ENST00000356800 LINC00612Q8N6U2 182 aa12.93□□□□□ -0.34
SMARCD3-202ENST00000356800 TRBV6-5A0A0K0K1A5 114 aa12.92□□□□□ -0.34
SMARCD3-202ENST00000356800 RPL32P62910 135 aaKnown RBP12.92□□□□□ -0.34
SMARCD3-202ENST00000356800 Q6ZSN1 163 aa12.92□□□□□ -0.34
SMARCD3-202ENST00000356800 ZNF479Q96JC4 524 aa12.92□□□□□ -0.34
SMARCD3-202ENST00000356800 SMIM2Q9BVW6 85 aa12.92□□□□□ -0.34
SMARCD3-202ENST00000356800 TENM3Q9P273 2699 aa12.91□□□□□ -0.34
SMARCD3-202ENST00000356800 TRAV4A0A0B4J268 109 aa12.91□□□□□ -0.34
SMARCD3-202ENST00000356800 PMCHL1Q16048 86 aa12.91□□□□□ -0.34
SMARCD3-202ENST00000356800 FAM222AQ5U5X8 452 aa12.91□□□□□ -0.34
SMARCD3-202ENST00000356800 OR4C5Q8NGB2 326 aa12.91□□□□□ -0.34
SMARCD3-202ENST00000356800 H7C1H1 209 aa12.9□□□□□ -0.34
SMARCD3-202ENST00000356800 PYY3Q5JQD4 70 aa12.9□□□□□ -0.34
SMARCD3-202ENST00000356800 LINC00518Q8N0U6 118 aa12.9□□□□□ -0.34
SMARCD3-202ENST00000356800 ST20Q9HBF5 79 aa12.9□□□□□ -0.34
SMARCD3-202ENST00000356800 DKK2Q9UBU2 259 aa12.9□□□□□ -0.34
SMARCD3-202ENST00000356800 TRGV2A0A075B6R0 118 aa12.89□□□□□ -0.35
SMARCD3-202ENST00000356800 K7EMI3 77 aa12.89□□□□□ -0.35
SMARCD3-202ENST00000356800 IGHV3-53P01767 116 aa12.89□□□□□ -0.35
SMARCD3-202ENST00000356800 A0A096LNJ9 63 aa12.89□□□□□ -0.35
SMARCD3-202ENST00000356800 LYRM9A8MSI8 78 aa12.89□□□□□ -0.35
SMARCD3-202ENST00000356800 DEFB130BP0DP73 79 aa12.89□□□□□ -0.35
SMARCD3-202ENST00000356800 DEFB130AP0DP74 79 aa12.89□□□□□ -0.35
SMARCD3-202ENST00000356800 POLR2KP53803 58 aaKnown RBP12.89□□□□□ -0.35
SMARCD3-202ENST00000356800 JOSD1Q15040 202 aaPredicted RBP12.89□□□□□ -0.35
SMARCD3-202ENST00000356800 MRAPQ8TCY5 172 aa12.89□□□□□ -0.35
SMARCD3-202ENST00000356800 NIT2Q9NQR4 276 aa12.89□□□□□ -0.35
SMARCD3-202ENST00000356800 CELA1Q9UNI1 258 aa12.89□□□□□ -0.35
SMARCD3-202ENST00000356800 CIDEAO60543 219 aa12.88□□□□□ -0.35
SMARCD3-202ENST00000356800 TM2D3Q9BRN9 247 aa12.88□□□□□ -0.35
SMARCD3-202ENST00000356800 TMEM70Q9BUB7 260 aa12.88□□□□□ -0.35
SMARCD3-202ENST00000356800 LEPROTL1O95214 131 aa12.87□□□□□ -0.35
SMARCD3-202ENST00000356800 TRBV27A0A0K0K1C4 114 aa12.86□□□□□ -0.35
SMARCD3-202ENST00000356800 HBDP02042 147 aa12.86□□□□□ -0.35
SMARCD3-202ENST00000356800 P0DMU3 169 aa12.86□□□□□ -0.35
SMARCD3-202ENST00000356800 FAM231AP0DMU4 169 aa12.86□□□□□ -0.35
SMARCD3-202ENST00000356800 FAM231CP0DMU5 169 aa12.86□□□□□ -0.35
SMARCD3-202ENST00000356800 LAGE3Q14657 143 aa12.86□□□□□ -0.35
SMARCD3-202ENST00000356800 C18orf15Q96N68 181 aa12.86□□□□□ -0.35
SMARCD3-202ENST00000356800 Q9UF83 564 aa12.86□□□□□ -0.35
SMARCD3-202ENST00000356800 SDHAF1A6NFY7 115 aa12.86□□□□□ -0.35
SMARCD3-202ENST00000356800 VCYO14598 125 aa12.86□□□□□ -0.35
SMARCD3-202ENST00000356800 FCER1GP30273 86 aa12.86□□□□□ -0.35
SMARCD3-202ENST00000356800 C12orf57Q99622 126 aa12.86□□□□□ -0.35
SMARCD3-202ENST00000356800 HSPB8Q9UJY1 196 aa12.86□□□□□ -0.35
SMARCD3-202ENST00000356800 HUWE1Q7Z6Z7 4374 aaKnown RBP12.85□□□□□ -0.35
SMARCD3-202ENST00000356800 TCAPO15273 167 aa12.85□□□□□ -0.35
SMARCD3-202ENST00000356800 SPATA25Q9BR10 227 aa12.85□□□□□ -0.35
SMARCD3-202ENST00000356800 ORMDL2Q53FV1 153 aa12.84□□□□□ -0.35
SMARCD3-202ENST00000356800 C3orf79P0CE67 100 aa12.83□□□□□ -0.35
SMARCD3-202ENST00000356800 KRTDAPP60985 99 aa12.83□□□□□ -0.35
SMARCD3-202ENST00000356800 FHL2Q14192 279 aa12.83□□□□□ -0.35
SMARCD3-202ENST00000356800 DNAJC30Q96LL9 226 aa12.83□□□□□ -0.35
SMARCD3-202ENST00000356800 SPART-AS1P0CW21 52 aa12.83□□□□□ -0.36
SMARCD3-202ENST00000356800 KIR2DL4Q99706 377 aa12.83□□□□□ -0.36
SMARCD3-202ENST00000356800 C11orf68Q9H3H3 251 aaKnown RBP12.83□□□□□ -0.36
SMARCD3-202ENST00000356800 DNAH9Q9NYC9 4486 aa12.82□□□□□ -0.36
SMARCD3-202ENST00000356800 BTF3P20290 206 aaKnown RBP12.82□□□□□ -0.36
SMARCD3-202ENST00000356800 SLC25A29Q8N8R3 303 aa12.82□□□□□ -0.36
SMARCD3-202ENST00000356800 TRBV10-1A0A0K0K1A3 114 aa12.81□□□□□ -0.36
SMARCD3-202ENST00000356800 DAD1P61803 113 aa12.81□□□□□ -0.36
SMARCD3-202ENST00000356800 LINC00173Q6ZV60 143 aa12.81□□□□□ -0.36
SMARCD3-202ENST00000356800 NEXN-AS1Q8NBZ9 246 aa12.81□□□□□ -0.36
SMARCD3-202ENST00000356800 TNFRSF18Q9Y5U5 241 aa12.81□□□□□ -0.36
SMARCD3-202ENST00000356800 NEGR1Q7Z3B1 354 aa12.8□□□□□ -0.36
SMARCD3-202ENST00000356800 TRGV4A0A0C4DH28 118 aa12.8□□□□□ -0.36
SMARCD3-202ENST00000356800 A0A0J9YWU9 116 aa12.8□□□□□ -0.36
SMARCD3-202ENST00000356800 I3L3M4 83 aa12.8□□□□□ -0.36
SMARCD3-202ENST00000356800 K7EQD1 137 aa12.8□□□□□ -0.36
SMARCD3-202ENST00000356800 SCGB1D1O95968 90 aa12.8□□□□□ -0.36
SMARCD3-202ENST00000356800 NUDT3O95989 172 aa12.8□□□□□ -0.36
SMARCD3-202ENST00000356800 MAP1LC3CQ9BXW4 147 aa12.8□□□□□ -0.36
SMARCD3-202ENST00000356800 G0S2P27469 103 aa12.79□□□□□ -0.36
SMARCD3-202ENST00000356800 Q8N976 141 aa12.79□□□□□ -0.36
SMARCD3-202ENST00000356800 COL7A1Q02388 2944 aa12.78□□□□□ -0.36
SMARCD3-202ENST00000356800 TRBV6-4A0A1B0GX49 114 aa12.78□□□□□ -0.36
SMARCD3-202ENST00000356800 SYS1-DBNDD2H3BUS1 97 aa12.78□□□□□ -0.36
SMARCD3-202ENST00000356800 C12orf74Q32Q52 190 aa12.78□□□□□ -0.36
SMARCD3-202ENST00000356800 SPATA12Q7Z6I5 190 aa12.78□□□□□ -0.36
SMARCD3-202ENST00000356800 B9D2Q9BPU9 175 aa12.78□□□□□ -0.36
SMARCD3-202ENST00000356800 MEGF8Q7Z7M0 2845 aa12.77□□□□□ -0.36
SMARCD3-202ENST00000356800 TEX48A0A1B0GUV7 120 aa12.77□□□□□ -0.36
SMARCD3-202ENST00000356800 RHOHQ15669 191 aa12.77□□□□□ -0.36
SMARCD3-202ENST00000356800 CDPF1Q6NVV7 123 aa12.77□□□□□ -0.36
SMARCD3-202ENST00000356800 TOMM6Q96B49 74 aa12.77□□□□□ -0.36
SMARCD3-202ENST00000356800 LINC01549A6NIU2 74 aa12.77□□□□□ -0.37
SMARCD3-202ENST00000356800 TSHBP01222 138 aa12.77□□□□□ -0.37
SMARCD3-202ENST00000356800 PET117Q6UWS5 81 aa12.77□□□□□ -0.37
SMARCD3-202ENST00000356800 DEFB104AQ8WTQ1 72 aa12.77□□□□□ -0.37
SMARCD3-202ENST00000356800 IFI27L1Q96BM0 104 aa12.77□□□□□ -0.37
SMARCD3-202ENST00000356800 TRBV7-3A0A075B6L6 115 aa12.76□□□□□ -0.37
SMARCD3-202ENST00000356800 LOC100131303A0A0U1RQF7 123 aa12.76□□□□□ -0.37
SMARCD3-202ENST00000356800 HHLA3Q9XRX5 114 aa12.76□□□□□ -0.37
SMARCD3-202ENST00000356800 ATP5LO75964 103 aa12.75□□□□□ -0.37
SMARCD3-202ENST00000356800 ATP5G1P05496 136 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms