RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 FAM231AP0DMU4 169 aa14.46□□□□□ -0.09
COL13A1-201ENST00000354547 FAM231CP0DMU5 169 aa14.46□□□□□ -0.09
COL13A1-201ENST00000354547 HERVK_113P61574 105 aa14.46□□□□□ -0.09
COL13A1-201ENST00000354547 SAMD13Q5VXD3 122 aa14.46□□□□□ -0.09
COL13A1-201ENST00000354547 NF1P21359 2839 aa14.46□□□□□ -0.1
COL13A1-201ENST00000354547 ETDBQ3ZM63 59 aa14.46□□□□□ -0.1
COL13A1-201ENST00000354547 TRBV27A0A0K0K1C4 114 aa14.45□□□□□ -0.1
COL13A1-201ENST00000354547 COX6B1P14854 86 aa14.45□□□□□ -0.1
COL13A1-201ENST00000354547 PROK1P58294 105 aa14.45□□□□□ -0.1
COL13A1-201ENST00000354547 VPREB3Q9UKI3 123 aa14.45□□□□□ -0.1
COL13A1-201ENST00000354547 USP24Q9UPU5 2620 aa14.45□□□□□ -0.1
COL13A1-201ENST00000354547 DEFB131AP59861 70 aa14.45□□□□□ -0.1
COL13A1-201ENST00000354547 LOC107984156A0A0G2JMH3 177 aa14.44□□□□□ -0.1
COL13A1-201ENST00000354547 DSCR9P59020 149 aa14.44□□□□□ -0.1
COL13A1-201ENST00000354547 ARL17AQ8IVW1 177 aa14.44□□□□□ -0.1
COL13A1-201ENST00000354547 RBMY1A1P0DJD3 496 aaKnown RBP14.44□□□□□ -0.1
COL13A1-201ENST00000354547 RBMY1CP0DJD4 496 aa14.44□□□□□ -0.1
COL13A1-201ENST00000354547 RBMY1FQ15415 496 aaKnown RBP14.44□□□□□ -0.1
COL13A1-201ENST00000354547 ZNF580Q9UK33 172 aa14.44□□□□□ -0.1
COL13A1-201ENST00000354547 TMEM141Q96I45 108 aa14.43□□□□□ -0.1
COL13A1-201ENST00000354547 ZNF702PQ9H963 129 aa14.43□□□□□ -0.1
COL13A1-201ENST00000354547 KRTAP10-9P60411 292 aa14.42□□□□□ -0.1
COL13A1-201ENST00000354547 RPL32P62910 135 aaKnown RBP14.42□□□□□ -0.1
COL13A1-201ENST00000354547 TIMM17AQ99595 171 aa14.42□□□□□ -0.1
COL13A1-201ENST00000354547 GAGE13Q4V321 117 aa14.41□□□□□ -0.1
COL13A1-201ENST00000354547 TRPT1Q86TN4 253 aaKnown RBP14.41□□□□□ -0.1
COL13A1-201ENST00000354547 PRRC2AP48634 2157 aaKnown RBP14.41□□□□□ -0.1
COL13A1-201ENST00000354547 A0A096LNT2 108 aa14.41□□□□□ -0.1
COL13A1-201ENST00000354547 A0A0J9YY99 117 aa14.41□□□□□ -0.1
COL13A1-201ENST00000354547 RNASE13Q5GAN3 156 aaKnown RBP14.41□□□□□ -0.1
COL13A1-201ENST00000354547 Q9UF83 564 aa14.41□□□□□ -0.1
COL13A1-201ENST00000354547 PAPPA-AS1Q5QFB9 102 aa14.4□□□□□ -0.1
COL13A1-201ENST00000354547 CEMP1Q6PRD7 247 aaPredicted RBP14.4□□□□□ -0.1
COL13A1-201ENST00000354547 ODF3Q96PU9 254 aa14.4□□□□□ -0.1
COL13A1-201ENST00000354547 TRBV6-5A0A0K0K1A5 114 aa14.4□□□□□ -0.1
COL13A1-201ENST00000354547 TMEM238LA0A1B0GVL6 79 aa14.39□□□□□ -0.11
COL13A1-201ENST00000354547 A6NJY4 79 aa14.39□□□□□ -0.11
COL13A1-201ENST00000354547 F8W1H4 67 aa14.39□□□□□ -0.11
COL13A1-201ENST00000354547 UBE2E2Q96LR5 201 aa14.39□□□□□ -0.11
COL13A1-201ENST00000354547 ELANEP08246 267 aa14.39□□□□□ -0.11
COL13A1-201ENST00000354547 LGALS3P17931 250 aaKnown RBP14.39□□□□□ -0.11
COL13A1-201ENST00000354547 PSMB2P49721 201 aa14.39□□□□□ -0.11
COL13A1-201ENST00000354547 C2CD3Q4AC94 2353 aa14.39□□□□□ -0.11
COL13A1-201ENST00000354547 A0A0J9YXV3 536 aa14.39□□□□□ -0.11
COL13A1-201ENST00000354547 A0A1B0GWB2 263 aa14.39□□□□□ -0.11
COL13A1-201ENST00000354547 LINC01619G3V211 115 aa14.39□□□□□ -0.11
COL13A1-201ENST00000354547 J3QQQ9 107 aa14.39□□□□□ -0.11
COL13A1-201ENST00000354547 SPANXB1Q9NS25 103 aaPredicted RBP14.39□□□□□ -0.11
COL13A1-201ENST00000354547 Q6YL49 198 aa14.38□□□□□ -0.11
COL13A1-201ENST00000354547 I3L3M4 83 aa14.38□□□□□ -0.11
COL13A1-201ENST00000354547 INSL3P51460 131 aa14.37□□□□□ -0.11
COL13A1-201ENST00000354547 TMEM89A2RUT3 159 aa14.37□□□□□ -0.11
COL13A1-201ENST00000354547 TSPAN13O95857 204 aa14.37□□□□□ -0.11
COL13A1-201ENST00000354547 C20orf203Q8NBC4 194 aa14.37□□□□□ -0.11
COL13A1-201ENST00000354547 ZNF469Q96JG9 3925 aaPredicted RBP14.37□□□□□ -0.11
COL13A1-201ENST00000354547 TRGV11A0A075B6L2 103 aa14.36□□□□□ -0.11
COL13A1-201ENST00000354547 IGHV4-31P0DP07 118 aa14.36□□□□□ -0.11
COL13A1-201ENST00000354547 C11orf44Q8N8P7 122 aa14.36□□□□□ -0.11
COL13A1-201ENST00000354547 ZNF418Q8TF45 676 aaPredicted RBP14.36□□□□□ -0.11
COL13A1-201ENST00000354547 VCX2Q9H322 139 aa14.36□□□□□ -0.11
COL13A1-201ENST00000354547 NIPBLQ6KC79 2804 aaeCLIP14.36□□□□□ -0.11
COL13A1-201ENST00000354547 ADARB2-AS1A8MUL3 147 aa14.36□□□□□ -0.11
COL13A1-201ENST00000354547 J3QLI3 93 aa14.36□□□□□ -0.11
COL13A1-201ENST00000354547 TMEM61Q8N0U2 210 aa14.36□□□□□ -0.11
COL13A1-201ENST00000354547 GTSF1LQ9H1H1 148 aa14.35□□□□□ -0.11
COL13A1-201ENST00000354547 TSSC4Q9Y5U2 329 aaPredicted RBP14.35□□□□□ -0.11
COL13A1-201ENST00000354547 JMJD1CQ15652 2540 aa14.35□□□□□ -0.11
COL13A1-201ENST00000354547 RBMY1BA6NDE4 496 aaKnown RBP14.35□□□□□ -0.11
COL13A1-201ENST00000354547 RBMY1EA6NEQ0 496 aaKnown RBP14.35□□□□□ -0.11
COL13A1-201ENST00000354547 H7C2G1 150 aa14.35□□□□□ -0.11
COL13A1-201ENST00000354547 RBMY1DP0C7P1 496 aaKnown RBP14.35□□□□□ -0.11
COL13A1-201ENST00000354547 SPXQ9BT56 116 aa14.35□□□□□ -0.11
COL13A1-201ENST00000354547 UBE2D1P51668 147 aa14.34□□□□□ -0.11
COL13A1-201ENST00000354547 NSUN5P1Q3KNT7 163 aa14.34□□□□□ -0.11
COL13A1-201ENST00000354547 SPAG8Q99932 426 aaPredicted RBP14.34□□□□□ -0.11
COL13A1-201ENST00000354547 IGLV4-3A0A075B6K6 122 aa14.33□□□□□ -0.11
COL13A1-201ENST00000354547 RHOHQ15669 191 aa14.33□□□□□ -0.11
COL13A1-201ENST00000354547 TRAV2A0A0B4J234 112 aa14.33□□□□□ -0.12
COL13A1-201ENST00000354547 NDUFA11Q86Y39 141 aa14.33□□□□□ -0.12
COL13A1-201ENST00000354547 BBC3Q96PG8 261 aaPredicted RBP14.33□□□□□ -0.12
COL13A1-201ENST00000354547 IGHV3-38A0A0C4DH36 116 aa14.33□□□□□ -0.12
COL13A1-201ENST00000354547 H3BMM0 161 aa14.33□□□□□ -0.12
COL13A1-201ENST00000354547 IGHV3-30P01768 117 aa14.33□□□□□ -0.12
COL13A1-201ENST00000354547 IGHV3-30-5P0DP03 117 aa14.33□□□□□ -0.12
COL13A1-201ENST00000354547 CD28P10747 220 aa14.33□□□□□ -0.12
COL13A1-201ENST00000354547 ZNF22P17026 224 aaPredicted RBP14.32□□□□□ -0.12
COL13A1-201ENST00000354547 Q6ZSN1 163 aa14.32□□□□□ -0.12
COL13A1-201ENST00000354547 SLC25A29Q8N8R3 303 aa14.32□□□□□ -0.12
COL13A1-201ENST00000354547 PRO0461Q9UI25 63 aa14.32□□□□□ -0.12
COL13A1-201ENST00000354547 TNFRSF18Q9Y5U5 241 aa14.32□□□□□ -0.12
COL13A1-201ENST00000354547 CFC1BP0CG36 223 aa14.32□□□□□ -0.12
COL13A1-201ENST00000354547 CFC1P0CG37 223 aa14.32□□□□□ -0.12
COL13A1-201ENST00000354547 RAX2Q96IS3 184 aa14.32□□□□□ -0.12
COL13A1-201ENST00000354547 AMELXQ99217 191 aa14.32□□□□□ -0.12
COL13A1-201ENST00000354547 CR1P17927 2039 aa14.31□□□□□ -0.12
COL13A1-201ENST00000354547 IGHV3OR16-12A0A075B7B8 117 aa14.31□□□□□ -0.12
COL13A1-201ENST00000354547 Q5PR19 223 aa14.31□□□□□ -0.12
COL13A1-201ENST00000354547 DYNLRB2Q8TF09 96 aa14.31□□□□□ -0.12
COL13A1-201ENST00000354547 LINC01587Q99440 93 aa14.31□□□□□ -0.12
COL13A1-201ENST00000354547 DLX4Q92988 240 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms