RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 TRAV12-3A0A0B4J271 114 aa5.98□□□□□ -1.45
CD44-205ENST00000352818 IGHV3-16A0A0C4DH30 117 aa5.98□□□□□ -1.45
CD44-205ENST00000352818 LOC389332A0A1B0GUA5 103 aa5.98□□□□□ -1.45
CD44-205ENST00000352818 CD7P09564 240 aa5.98□□□□□ -1.45
CD44-205ENST00000352818 IGLC3P0DOY3 106 aa5.98□□□□□ -1.45
CD44-205ENST00000352818 FCER1GP30273 86 aa5.98□□□□□ -1.45
CD44-205ENST00000352818 DEFB131AP59861 70 aa5.98□□□□□ -1.45
CD44-205ENST00000352818 SPINK13Q1W4C9 94 aa5.98□□□□□ -1.45
CD44-205ENST00000352818 LGALS9BQ3B8N2 356 aa5.98□□□□□ -1.45
CD44-205ENST00000352818 PIK3CD-AS1Q5SR53 167 aa5.98□□□□□ -1.45
CD44-205ENST00000352818 LGALS9CQ6DKI2 356 aa5.98□□□□□ -1.45
CD44-205ENST00000352818 SMIM2Q9BVW6 85 aa5.98□□□□□ -1.45
CD44-205ENST00000352818 KIF25-AS1Q9Y6Z4 181 aa5.98□□□□□ -1.45
CD44-205ENST00000352818 DNAH5Q8TE73 4624 aa5.97□□□□□ -1.45
CD44-205ENST00000352818 KNCNA6PVL3 124 aa5.97□□□□□ -1.45
CD44-205ENST00000352818 GAS8-AS1O95177 125 aa5.97□□□□□ -1.45
CD44-205ENST00000352818 GATA1P15976 413 aaPredicted RBP5.97□□□□□ -1.45
CD44-205ENST00000352818 CMC4P56277 68 aaPredicted RBP5.97□□□□□ -1.45
CD44-205ENST00000352818 CD300EQ496F6 205 aaPredicted RBP5.97□□□□□ -1.45
CD44-205ENST00000352818 C9orf66Q5T8R8 295 aa5.97□□□□□ -1.45
CD44-205ENST00000352818 SYT8Q8NBV8 401 aa5.97□□□□□ -1.45
CD44-205ENST00000352818 RASL10AQ92737 203 aa5.97□□□□□ -1.45
CD44-205ENST00000352818 PTH2Q96A98 100 aa5.97□□□□□ -1.45
CD44-205ENST00000352818 IFI27L1Q96BM0 104 aa5.97□□□□□ -1.45
CD44-205ENST00000352818 FAM110AQ9BQ89 295 aa5.97□□□□□ -1.45
CD44-205ENST00000352818 ST20Q9HBF5 79 aa5.97□□□□□ -1.45
CD44-205ENST00000352818 UQCR10Q9UDW1 63 aa5.97□□□□□ -1.45
CD44-205ENST00000352818 TIMM8BQ9Y5J9 83 aaPredicted RBP5.97□□□□□ -1.45
CD44-205ENST00000352818 TRAV12-2A0A075B6T6 113 aa5.96□□□□□ -1.46
CD44-205ENST00000352818 SMIM17P0DL12 118 aa5.96□□□□□ -1.46
CD44-205ENST00000352818 LINC00315P59091 139 aa5.96□□□□□ -1.46
CD44-205ENST00000352818 SUMO2P61956 95 aaKnown RBP5.96□□□□□ -1.46
CD44-205ENST00000352818 LAGE3Q14657 143 aa5.96□□□□□ -1.46
CD44-205ENST00000352818 ZNF705AQ6ZN79 300 aaPredicted RBP5.96□□□□□ -1.46
CD44-205ENST00000352818 Q8N1Y9 231 aa5.96□□□□□ -1.46
CD44-205ENST00000352818 C14orf178Q8N769 122 aaPredicted RBP5.96□□□□□ -1.46
CD44-205ENST00000352818 C2orf88Q9BSF0 95 aa5.96□□□□□ -1.46
CD44-205ENST00000352818 C19orf73Q9NVV2 129 aa5.96□□□□□ -1.46
CD44-205ENST00000352818 TRAV26-2A0A0B4J265 109 aa5.95□□□□□ -1.46
CD44-205ENST00000352818 TRBV6-5A0A0K0K1A5 114 aa5.95□□□□□ -1.46
CD44-205ENST00000352818 LINC01549A6NIU2 74 aa5.95□□□□□ -1.46
CD44-205ENST00000352818 HSBP1L1C9JCN9 74 aa5.95□□□□□ -1.46
CD44-205ENST00000352818 ATP5LO75964 103 aa5.95□□□□□ -1.46
CD44-205ENST00000352818 IGKV3-20P01619 116 aa5.95□□□□□ -1.46
CD44-205ENST00000352818 MGPP08493 103 aa5.95□□□□□ -1.46
CD44-205ENST00000352818 ODF3L2Q3SX64 289 aa5.95□□□□□ -1.46
CD44-205ENST00000352818 ORMDL2Q53FV1 153 aa5.95□□□□□ -1.46
CD44-205ENST00000352818 ATOH7Q8N100 152 aa5.95□□□□□ -1.46
CD44-205ENST00000352818 IL17DQ8TAD2 202 aa5.95□□□□□ -1.46
CD44-205ENST00000352818 RETNQ9HD89 108 aa5.95□□□□□ -1.46
CD44-205ENST00000352818 FAT1Q14517 4588 aa5.94□□□□□ -1.46
CD44-205ENST00000352818 M0R143 59 aa5.94□□□□□ -1.46
CD44-205ENST00000352818 INSP01308 110 aa5.94□□□□□ -1.46
CD44-205ENST00000352818 RBMY1A1P0DJD3 496 aaKnown RBP5.94□□□□□ -1.46
CD44-205ENST00000352818 RBMY1CP0DJD4 496 aa5.94□□□□□ -1.46
CD44-205ENST00000352818 RBMY1FQ15415 496 aaKnown RBP5.94□□□□□ -1.46
CD44-205ENST00000352818 SPATA25Q9BR10 227 aa5.94□□□□□ -1.46
CD44-205ENST00000352818 MDFICQ9P1T7 246 aa5.94□□□□□ -1.46
CD44-205ENST00000352818 GOLT1BQ9Y3E0 138 aa5.94□□□□□ -1.46
CD44-205ENST00000352818 OR11H12B2RN74 326 aa5.93□□□□□ -1.46
CD44-205ENST00000352818 SPRY2O43597 315 aa5.93□□□□□ -1.46
CD44-205ENST00000352818 IGLV1-51P01701 117 aa5.93□□□□□ -1.46
CD44-205ENST00000352818 IGHV4-30-4P0DP06 118 aa5.93□□□□□ -1.46
CD44-205ENST00000352818 G0S2P27469 103 aa5.93□□□□□ -1.46
CD44-205ENST00000352818 ZNF415Q09FC8 603 aa5.93□□□□□ -1.46
CD44-205ENST00000352818 MAJINQ3KP22 176 aa5.93□□□□□ -1.46
CD44-205ENST00000352818 SUMO4Q6EEV6 95 aa5.93□□□□□ -1.46
CD44-205ENST00000352818 TRPT1Q86TN4 253 aaKnown RBP5.93□□□□□ -1.46
CD44-205ENST00000352818 LINC00469Q8N7U9 141 aa5.93□□□□□ -1.46
CD44-205ENST00000352818 SPXQ9BT56 116 aa5.93□□□□□ -1.46
CD44-205ENST00000352818 SNHG12Q9BXW3 62 aa5.93□□□□□ -1.46
CD44-205ENST00000352818 MRPS16Q9Y3D3 137 aaKnown RBP5.93□□□□□ -1.46
CD44-205ENST00000352818 TRAV12-1A0A0B4J245 112 aa5.92□□□□□ -1.46
CD44-205ENST00000352818 CBY3A6NI87 242 aa5.92□□□□□ -1.46
CD44-205ENST00000352818 M0R2P5 195 aa5.92□□□□□ -1.46
CD44-205ENST00000352818 EREGO14944 169 aa5.92□□□□□ -1.46
CD44-205ENST00000352818 TCAPO15273 167 aa5.92□□□□□ -1.46
CD44-205ENST00000352818 CRYGDP07320 174 aa5.92□□□□□ -1.46
CD44-205ENST00000352818 HNRNPA3P51991 378 aaKnown RBP5.92□□□□□ -1.46
CD44-205ENST00000352818 POLR2KP53803 58 aaKnown RBP5.92□□□□□ -1.46
CD44-205ENST00000352818 ODF1Q14990 250 aa5.92□□□□□ -1.46
CD44-205ENST00000352818 Q6ZN92 141 aa5.92□□□□□ -1.46
CD44-205ENST00000352818 STHQ8IWL8 128 aa5.92□□□□□ -1.46
CD44-205ENST00000352818 MAPKAPK5-AS1Q8N8E1 139 aa5.92□□□□□ -1.46
CD44-205ENST00000352818 TOMM6Q96B49 74 aa5.92□□□□□ -1.46
CD44-205ENST00000352818 RPL39LQ96EH5 51 aaKnown RBP5.92□□□□□ -1.46
CD44-205ENST00000352818 PMCHL2Q9BQD1 86 aa5.92□□□□□ -1.46
CD44-205ENST00000352818 AGRNO00468 2067 aa5.91□□□□□ -1.46
CD44-205ENST00000352818 TRBV27A0A0K0K1C4 114 aa5.91□□□□□ -1.46
CD44-205ENST00000352818 hDV102S1A0JD36 115 aa5.91□□□□□ -1.46
CD44-205ENST00000352818 A8MWV9 139 aa5.91□□□□□ -1.46
CD44-205ENST00000352818 A8MZ25 164 aa5.91□□□□□ -1.46
CD44-205ENST00000352818 H0Y8G0 127 aa5.91□□□□□ -1.46
CD44-205ENST00000352818 VCYO14598 125 aa5.91□□□□□ -1.46
CD44-205ENST00000352818 NUDT3O95989 172 aa5.91□□□□□ -1.46
CD44-205ENST00000352818 FXYD7P58549 80 aa5.91□□□□□ -1.46
CD44-205ENST00000352818 ZNF124Q15973 351 aa5.91□□□□□ -1.46
CD44-205ENST00000352818 SLC25A34Q6PIV7 304 aa5.91□□□□□ -1.46
CD44-205ENST00000352818 C11orf72Q8NBR9 251 aa5.91□□□□□ -1.46
CD44-205ENST00000352818 JPT2Q9H910 190 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms