RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 PLA2G2CQ5R387 149 aa11.45□□□□□ -0.58
LMNA-201ENST00000347559 PTPRZ1P23471 2315 aaPredicted RBP11.45□□□□□ -0.58
LMNA-201ENST00000347559 A8MZ25 164 aa11.45□□□□□ -0.58
LMNA-201ENST00000347559 UNQ9165/PRO28630Q6UXU0 137 aa11.45□□□□□ -0.58
LMNA-201ENST00000347559 TRAV12-3A0A0B4J271 114 aa11.44□□□□□ -0.58
LMNA-201ENST00000347559 OVOL1O14753 267 aa11.44□□□□□ -0.58
LMNA-201ENST00000347559 DUX5Q96PT3 197 aa11.44□□□□□ -0.58
LMNA-201ENST00000347559 TIMM21Q9BVV7 248 aa11.44□□□□□ -0.58
LMNA-201ENST00000347559 MRPL23Q16540 153 aaKnown RBP11.44□□□□□ -0.58
LMNA-201ENST00000347559 DAND5Q8N907 189 aa11.44□□□□□ -0.58
LMNA-201ENST00000347559 KLK5Q9Y337 293 aaPredicted RBP11.44□□□□□ -0.58
LMNA-201ENST00000347559 TRBV27A0A0K0K1C4 114 aa11.43□□□□□ -0.58
LMNA-201ENST00000347559 I3L3M4 83 aa11.43□□□□□ -0.58
LMNA-201ENST00000347559 U3KQE9 123 aa11.43□□□□□ -0.58
LMNA-201ENST00000347559 COL6A6A6NMZ7 2263 aa11.43□□□□□ -0.58
LMNA-201ENST00000347559 MED14OSP0DP75 135 aa11.42□□□□□ -0.58
LMNA-201ENST00000347559 TRBV7-1A0A0A6YYK4 115 aa11.42□□□□□ -0.58
LMNA-201ENST00000347559 M0R1W7 72 aa11.42□□□□□ -0.58
LMNA-201ENST00000347559 TRBV12-3P01733 135 aa11.42□□□□□ -0.58
LMNA-201ENST00000347559 NDUFA12Q9UI09 145 aa11.42□□□□□ -0.58
LMNA-201ENST00000347559 TRBV7-7A0A0K0K1E9 115 aa11.42□□□□□ -0.58
LMNA-201ENST00000347559 IGFL3Q6UXB1 125 aa11.42□□□□□ -0.58
LMNA-201ENST00000347559 IGKV3-20P01619 116 aa11.41□□□□□ -0.58
LMNA-201ENST00000347559 LST1O00453 97 aa11.41□□□□□ -0.58
LMNA-201ENST00000347559 LITAFQ99732 161 aa11.41□□□□□ -0.58
LMNA-201ENST00000347559 BDP1A6H8Y1 2624 aa11.4□□□□□ -0.58
LMNA-201ENST00000347559 SORL1Q92673 2214 aa11.4□□□□□ -0.58
LMNA-201ENST00000347559 IGLV4-3A0A075B6K6 122 aa11.4□□□□□ -0.58
LMNA-201ENST00000347559 FAM240AA0A1B0GVK7 77 aa11.4□□□□□ -0.58
LMNA-201ENST00000347559 IGHV1-69P01742 117 aa11.4□□□□□ -0.58
LMNA-201ENST00000347559 IGHV3-11P01762 117 aa11.4□□□□□ -0.58
LMNA-201ENST00000347559 ATP5J2P56134 94 aa11.4□□□□□ -0.58
LMNA-201ENST00000347559 EBI3Q14213 229 aa11.4□□□□□ -0.58
LMNA-201ENST00000347559 TMEM219Q86XT9 240 aa11.4□□□□□ -0.58
LMNA-201ENST00000347559 POM121L12Q8N7R1 296 aa11.4□□□□□ -0.58
LMNA-201ENST00000347559 CD28P10747 220 aa11.4□□□□□ -0.59
LMNA-201ENST00000347559 C20orf203Q8NBC4 194 aa11.4□□□□□ -0.59
LMNA-201ENST00000347559 LINC01600Q96MT4 127 aa11.39□□□□□ -0.59
LMNA-201ENST00000347559 A0A0U1RRA0 63 aa11.39□□□□□ -0.59
LMNA-201ENST00000347559 MINOS1Q5TGZ0 78 aa11.39□□□□□ -0.59
LMNA-201ENST00000347559 NDUFA7O95182 113 aa11.38□□□□□ -0.59
LMNA-201ENST00000347559 HERVK_113P63121 156 aa11.38□□□□□ -0.59
LMNA-201ENST00000347559 NXPH4O95158 308 aa11.38□□□□□ -0.59
LMNA-201ENST00000347559 CSDC2Q9Y534 153 aaKnown RBP11.38□□□□□ -0.59
LMNA-201ENST00000347559 A0A0J9YX75 114 aa11.38□□□□□ -0.59
LMNA-201ENST00000347559 NPFFO15130 113 aa11.38□□□□□ -0.59
LMNA-201ENST00000347559 C3orf22Q8N5N4 141 aa11.38□□□□□ -0.59
LMNA-201ENST00000347559 SPTAN1Q13813 2472 aaKnown RBP11.37□□□□□ -0.59
LMNA-201ENST00000347559 M0QY20 66 aa11.37□□□□□ -0.59
LMNA-201ENST00000347559 GRNP28799 593 aaKnown RBP11.37□□□□□ -0.59
LMNA-201ENST00000347559 SMCR5Q8TEV8 140 aa11.37□□□□□ -0.59
LMNA-201ENST00000347559 TRAV12-2A0A075B6T6 113 aa11.37□□□□□ -0.59
LMNA-201ENST00000347559 TRAV41A0A0B4J266 112 aa11.37□□□□□ -0.59
LMNA-201ENST00000347559 ZFP36P26651 326 aaKnown RBP11.37□□□□□ -0.59
LMNA-201ENST00000347559 MIAQ16674 131 aa11.37□□□□□ -0.59
LMNA-201ENST00000347559 NSUN5P1Q3KNT7 163 aa11.37□□□□□ -0.59
LMNA-201ENST00000347559 NRGNQ92686 78 aa11.37□□□□□ -0.59
LMNA-201ENST00000347559 IGHV3-73A0A0B4J1V6 119 aa11.36□□□□□ -0.59
LMNA-201ENST00000347559 SOCS3O14543 225 aa11.36□□□□□ -0.59
LMNA-201ENST00000347559 TMEM61Q8N0U2 210 aa11.36□□□□□ -0.59
LMNA-201ENST00000347559 DNAJC30Q96LL9 226 aa11.36□□□□□ -0.59
LMNA-201ENST00000347559 MINOS1-NBL1R4GNA1 71 aa11.36□□□□□ -0.59
LMNA-201ENST00000347559 RHOHQ15669 191 aa11.36□□□□□ -0.59
LMNA-201ENST00000347559 TRBV6-5A0A0K0K1A5 114 aa11.35□□□□□ -0.59
LMNA-201ENST00000347559 SAA4P35542 130 aa11.35□□□□□ -0.59
LMNA-201ENST00000347559 KLK9Q9UKQ9 250 aa11.35□□□□□ -0.59
LMNA-201ENST00000347559 TLN1Q9Y490 2541 aaKnown RBP11.35□□□□□ -0.59
LMNA-201ENST00000347559 FAM19A4Q96LR4 140 aa11.35□□□□□ -0.59
LMNA-201ENST00000347559 DEFB121Q5J5C9 76 aa11.34□□□□□ -0.59
LMNA-201ENST00000347559 RIF1Q5UIP0 2472 aaKnown RBP11.34□□□□□ -0.59
LMNA-201ENST00000347559 ZNF625Q96I27 306 aaPredicted RBP11.34□□□□□ -0.59
LMNA-201ENST00000347559 RHPN1-AS1Q9BWJ2 59 aa11.34□□□□□ -0.59
LMNA-201ENST00000347559 EDA2RQ9HAV5 297 aa11.34□□□□□ -0.59
LMNA-201ENST00000347559 AKAP13Q12802 2813 aa11.34□□□□□ -0.59
LMNA-201ENST00000347559 IGHV1-58A0A0C4DH39 117 aa11.33□□□□□ -0.6
LMNA-201ENST00000347559 UQCRQO14949 82 aa11.33□□□□□ -0.6
LMNA-201ENST00000347559 RS1O15537 224 aa11.33□□□□□ -0.6
LMNA-201ENST00000347559 CREBBPQ92793 2442 aa11.33□□□□□ -0.6
LMNA-201ENST00000347559 SPANXDQ9BXN6 97 aa11.33□□□□□ -0.6
LMNA-201ENST00000347559 SPANXCQ9NY87 97 aa11.33□□□□□ -0.6
LMNA-201ENST00000347559 IGHV3OR16-10A0A075B7F0 116 aa11.33□□□□□ -0.6
LMNA-201ENST00000347559 HTN1P15515 57 aa11.33□□□□□ -0.6
LMNA-201ENST00000347559 NACAE9PAV3 2078 aa11.32□□□□□ -0.6
LMNA-201ENST00000347559 OTOGLQ3ZCN5 2332 aa11.32□□□□□ -0.6
LMNA-201ENST00000347559 EDN2P20800 178 aa11.32□□□□□ -0.6
LMNA-201ENST00000347559 FAM19A5Q7Z5A7 132 aaPredicted RBP11.31□□□□□ -0.6
LMNA-201ENST00000347559 LINC00643Q86TS7 51 aa11.31□□□□□ -0.6
LMNA-201ENST00000347559 IMUPQ9GZP8 106 aa11.31□□□□□ -0.6
LMNA-201ENST00000347559 KLLNB2CW77 178 aa11.31□□□□□ -0.6
LMNA-201ENST00000347559 APRG1Q8IVJ8 170 aa11.31□□□□□ -0.6
LMNA-201ENST00000347559 ACYP1P07311 99 aa11.31□□□□□ -0.6
LMNA-201ENST00000347559 DAZ2Q13117 558 aaKnown RBP11.31□□□□□ -0.6
LMNA-201ENST00000347559 DAZ4Q86SG3 579 aaKnown RBP11.31□□□□□ -0.6
LMNA-201ENST00000347559 VSIG2Q96IQ7 327 aa11.31□□□□□ -0.6
LMNA-201ENST00000347559 DAZ1Q9NQZ3 744 aaKnown RBP11.31□□□□□ -0.6
LMNA-201ENST00000347559 DAZ3Q9NR90 486 aaKnown RBP11.31□□□□□ -0.6
LMNA-201ENST00000347559 LINC00526Q96FQ7 95 aa11.3□□□□□ -0.6
LMNA-201ENST00000347559 IGHV3-16A0A0C4DH30 117 aa11.3□□□□□ -0.6
LMNA-201ENST00000347559 GAGE2AQ6NT46 116 aa11.3□□□□□ -0.6
LMNA-201ENST00000347559 UBTD1Q9HAC8 227 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms