RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 LST1O00453 97 aa11.67□□□□□ -0.54
LRP8-202ENST00000347547 TMEM101Q96IK0 257 aa11.67□□□□□ -0.54
LRP8-202ENST00000347547 CSMD1Q96PZ7 3565 aa11.67□□□□□ -0.54
LRP8-202ENST00000347547 UBE2E1P51965 193 aa11.67□□□□□ -0.54
LRP8-202ENST00000347547 CHCHD5Q9BSY4 110 aa11.67□□□□□ -0.54
LRP8-202ENST00000347547 LRBAP50851 2863 aa11.66□□□□□ -0.54
LRP8-202ENST00000347547 DCHS2Q6V1P9 2916 aa11.66□□□□□ -0.54
LRP8-202ENST00000347547 ACYP1P07311 99 aa11.66□□□□□ -0.54
LRP8-202ENST00000347547 G3V318 75 aa11.65□□□□□ -0.54
LRP8-202ENST00000347547 JPT2Q9H910 190 aa11.65□□□□□ -0.54
LRP8-202ENST00000347547 KLLNB2CW77 178 aa11.65□□□□□ -0.54
LRP8-202ENST00000347547 OPRPNQ99935 248 aaPredicted RBP11.65□□□□□ -0.54
LRP8-202ENST00000347547 F5H697 171 aa11.64□□□□□ -0.55
LRP8-202ENST00000347547 C20orf203Q8NBC4 194 aa11.64□□□□□ -0.55
LRP8-202ENST00000347547 DEFB104AQ8WTQ1 72 aa11.64□□□□□ -0.55
LRP8-202ENST00000347547 IGHV3-30-3P0DP02 117 aa11.64□□□□□ -0.55
LRP8-202ENST00000347547 DUX3Q96PT4 197 aa11.64□□□□□ -0.55
LRP8-202ENST00000347547 IGLV4-3A0A075B6K6 122 aa11.63□□□□□ -0.55
LRP8-202ENST00000347547 TRGV11A0A075B6L2 103 aa11.63□□□□□ -0.55
LRP8-202ENST00000347547 IGHV3-64A0A075B6Q5 118 aa11.63□□□□□ -0.55
LRP8-202ENST00000347547 A0A087WWL8 130 aa11.63□□□□□ -0.55
LRP8-202ENST00000347547 A0A0J9YXV3 536 aa11.63□□□□□ -0.55
LRP8-202ENST00000347547 FAM223BA6NKX1 122 aa11.63□□□□□ -0.55
LRP8-202ENST00000347547 FAM223AQ8IWN6 122 aa11.63□□□□□ -0.55
LRP8-202ENST00000347547 ATRXP46100 2492 aa11.63□□□□□ -0.55
LRP8-202ENST00000347547 MUC4Q99102 2169 aa11.63□□□□□ -0.55
LRP8-202ENST00000347547 M0QY20 66 aa11.63□□□□□ -0.55
LRP8-202ENST00000347547 DEFB1P60022 68 aa11.63□□□□□ -0.55
LRP8-202ENST00000347547 MIAQ16674 131 aa11.63□□□□□ -0.55
LRP8-202ENST00000347547 LINC01560Q8TB33 94 aa11.63□□□□□ -0.55
LRP8-202ENST00000347547 TIMM21Q9BVV7 248 aa11.62□□□□□ -0.55
LRP8-202ENST00000347547 ZNF256Q9Y2P7 627 aaPredicted RBP11.62□□□□□ -0.55
LRP8-202ENST00000347547 NDUFA4O00483 81 aa11.62□□□□□ -0.55
LRP8-202ENST00000347547 YAE1D1Q9NRH1 226 aa11.62□□□□□ -0.55
LRP8-202ENST00000347547 ZNF580Q9UK33 172 aa11.62□□□□□ -0.55
LRP8-202ENST00000347547 LY6HO94772 140 aa11.61□□□□□ -0.55
LRP8-202ENST00000347547 TMEM61Q8N0U2 210 aa11.61□□□□□ -0.55
LRP8-202ENST00000347547 CLEC2BQ92478 149 aa11.61□□□□□ -0.55
LRP8-202ENST00000347547 DNAJC30Q96LL9 226 aa11.61□□□□□ -0.55
LRP8-202ENST00000347547 SIRPDQ9H106 197 aa11.61□□□□□ -0.55
LRP8-202ENST00000347547 F6UB75 175 aa11.61□□□□□ -0.55
LRP8-202ENST00000347547 I3L3M4 83 aa11.61□□□□□ -0.55
LRP8-202ENST00000347547 MRPS36P82909 103 aaKnown RBP11.61□□□□□ -0.55
LRP8-202ENST00000347547 C19orf54Q5BKX5 351 aa11.61□□□□□ -0.55
LRP8-202ENST00000347547 C9orf85Q96MD7 179 aa11.61□□□□□ -0.55
LRP8-202ENST00000347547 ABCA4P78363 2273 aa11.6□□□□□ -0.55
LRP8-202ENST00000347547 ADAMTSL4-AS1Q5T5F5 129 aa11.6□□□□□ -0.55
LRP8-202ENST00000347547 NRGNQ92686 78 aa11.6□□□□□ -0.55
LRP8-202ENST00000347547 PPDPFQ9H3Y8 114 aa11.6□□□□□ -0.55
LRP8-202ENST00000347547 PYGO1Q9Y3Y4 419 aa11.6□□□□□ -0.55
LRP8-202ENST00000347547 FAM236AA0A1B0GUQ0 79 aa11.6□□□□□ -0.55
LRP8-202ENST00000347547 FAM236BA0A1B0GV22 79 aa11.6□□□□□ -0.55
LRP8-202ENST00000347547 ATP5G1P05496 136 aa11.6□□□□□ -0.55
LRP8-202ENST00000347547 PRSS2P07478 247 aa11.6□□□□□ -0.55
LRP8-202ENST00000347547 UNQ9165/PRO28630Q6UXU0 137 aa11.6□□□□□ -0.55
LRP8-202ENST00000347547 SPTA1P02549 2419 aa11.6□□□□□ -0.55
LRP8-202ENST00000347547 IGHV1-58A0A0C4DH39 117 aa11.59□□□□□ -0.55
LRP8-202ENST00000347547 TIMM17BO60830 172 aa11.59□□□□□ -0.55
LRP8-202ENST00000347547 C3orf22Q8N5N4 141 aa11.59□□□□□ -0.55
LRP8-202ENST00000347547 GRNP28799 593 aaKnown RBP11.59□□□□□ -0.55
LRP8-202ENST00000347547 KLRB1Q12918 225 aa11.59□□□□□ -0.55
LRP8-202ENST00000347547 PRORYQ9H606 182 aa11.59□□□□□ -0.55
LRP8-202ENST00000347547 NDUFA12Q9UI09 145 aa11.59□□□□□ -0.55
LRP8-202ENST00000347547 SDIM1Q6ZPB5 146 aa11.58□□□□□ -0.56
LRP8-202ENST00000347547 ADARB2-AS1A8MUL3 147 aa11.57□□□□□ -0.56
LRP8-202ENST00000347547 NDUFA7O95182 113 aa11.57□□□□□ -0.56
LRP8-202ENST00000347547 LINC00643Q86TS7 51 aa11.57□□□□□ -0.56
LRP8-202ENST00000347547 C5orf56Q8N8D9 126 aa11.57□□□□□ -0.56
LRP8-202ENST00000347547 DCANP1Q8TF63 244 aa11.57□□□□□ -0.56
LRP8-202ENST00000347547 SPXQ9BT56 116 aa11.57□□□□□ -0.56
LRP8-202ENST00000347547 WNK2Q9Y3S1 2297 aa11.57□□□□□ -0.56
LRP8-202ENST00000347547 IGHV3-16A0A0C4DH30 117 aa11.57□□□□□ -0.56
LRP8-202ENST00000347547 UQCRQO14949 82 aa11.57□□□□□ -0.56
LRP8-202ENST00000347547 TRAV41A0A0B4J266 112 aa11.56□□□□□ -0.56
LRP8-202ENST00000347547 FAM74A4Q5TZK3 123 aa11.56□□□□□ -0.56
LRP8-202ENST00000347547 RPL11P62913 178 aaKnown RBP11.56□□□□□ -0.56
LRP8-202ENST00000347547 FAM104AQ969W3 186 aa11.56□□□□□ -0.56
LRP8-202ENST00000347547 LINC00526Q96FQ7 95 aa11.56□□□□□ -0.56
LRP8-202ENST00000347547 RELNP78509 3460 aa11.55□□□□□ -0.56
LRP8-202ENST00000347547 ZFP36P26651 326 aaKnown RBP11.55□□□□□ -0.56
LRP8-202ENST00000347547 C9orf153Q5TBE3 101 aa11.55□□□□□ -0.56
LRP8-202ENST00000347547 VSIG2Q96IQ7 327 aa11.55□□□□□ -0.56
LRP8-202ENST00000347547 Q6ZSV7 163 aa11.54□□□□□ -0.56
LRP8-202ENST00000347547 C3orf56Q8N813 242 aa11.54□□□□□ -0.56
LRP8-202ENST00000347547 TRAV8-3A0A0A6YYJ7 113 aa11.54□□□□□ -0.56
LRP8-202ENST00000347547 LINC00694P0DN24 101 aa11.54□□□□□ -0.56
LRP8-202ENST00000347547 CXCL5P42830 114 aa11.54□□□□□ -0.56
LRP8-202ENST00000347547 EDA2RQ9HAV5 297 aa11.54□□□□□ -0.56
LRP8-202ENST00000347547 ANKHD1Q8IWZ3 2542 aaKnown RBP11.53□□□□□ -0.56
LRP8-202ENST00000347547 PKD1L2Q7Z442 2459 aa11.53□□□□□ -0.56
LRP8-202ENST00000347547 TINCRA0A1B0GVN0 87 aa11.53□□□□□ -0.56
LRP8-202ENST00000347547 A0A1B0GX51 115 aa11.53□□□□□ -0.56
LRP8-202ENST00000347547 TRBV12-3P01733 135 aa11.53□□□□□ -0.56
LRP8-202ENST00000347547 CD28P10747 220 aa11.53□□□□□ -0.56
LRP8-202ENST00000347547 SAA4P35542 130 aa11.53□□□□□ -0.56
LRP8-202ENST00000347547 CEMP1Q6PRD7 247 aaPredicted RBP11.53□□□□□ -0.56
LRP8-202ENST00000347547 TRAV12-3A0A0B4J271 114 aa11.53□□□□□ -0.56
LRP8-202ENST00000347547 LRRC75A-AS1Q8N1F1 130 aa11.53□□□□□ -0.56
LRP8-202ENST00000347547 SMCR5Q8TEV8 140 aa11.53□□□□□ -0.56
LRP8-202ENST00000347547 CSDC2Q9Y534 153 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms