RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 PCP2Q8IVA1 136 aa10.77□□□□□ -0.69
CXCL12-201ENST00000343575 SIGMAR1Q99720 223 aa10.77□□□□□ -0.69
CXCL12-201ENST00000343575 CNFNQ9BYD5 112 aa10.77□□□□□ -0.69
CXCL12-201ENST00000343575 IGLC6P0CF74 106 aa10.76□□□□□ -0.69
CXCL12-201ENST00000343575 CMC4P56277 68 aaPredicted RBP10.76□□□□□ -0.69
CXCL12-201ENST00000343575 Q8N1Y9 231 aa10.76□□□□□ -0.69
CXCL12-201ENST00000343575 NPYP01303 97 aa10.76□□□□□ -0.69
CXCL12-201ENST00000343575 IGKCP01834 107 aa10.76□□□□□ -0.69
CXCL12-201ENST00000343575 RBMY1A1P0DJD3 496 aaKnown RBP10.76□□□□□ -0.69
CXCL12-201ENST00000343575 RBMY1CP0DJD4 496 aa10.76□□□□□ -0.69
CXCL12-201ENST00000343575 GCSHP23434 173 aa10.76□□□□□ -0.69
CXCL12-201ENST00000343575 LEPP41159 167 aa10.76□□□□□ -0.69
CXCL12-201ENST00000343575 ODF1Q14990 250 aa10.76□□□□□ -0.69
CXCL12-201ENST00000343575 RBMY1FQ15415 496 aaKnown RBP10.76□□□□□ -0.69
CXCL12-201ENST00000343575 TWIST1Q15672 202 aa10.76□□□□□ -0.69
CXCL12-201ENST00000343575 CHAC1Q9BUX1 264 aa10.76□□□□□ -0.69
CXCL12-201ENST00000343575 TMSB15BA0A087X1C1 80 aa10.75□□□□□ -0.69
CXCL12-201ENST00000343575 DPM2O94777 84 aa10.75□□□□□ -0.69
CXCL12-201ENST00000343575 RPL24P83731 157 aaKnown RBP10.75□□□□□ -0.69
CXCL12-201ENST00000343575 TRAV12-3A0A0B4J271 114 aa10.74□□□□□ -0.69
CXCL12-201ENST00000343575 GIG44P09565 113 aaPredicted RBP10.74□□□□□ -0.69
CXCL12-201ENST00000343575 STHQ8IWL8 128 aa10.74□□□□□ -0.69
CXCL12-201ENST00000343575 CEND1Q8N111 149 aa10.74□□□□□ -0.69
CXCL12-201ENST00000343575 DKK2Q9UBU2 259 aa10.74□□□□□ -0.69
CXCL12-201ENST00000343575 TRAV21A0A0B4J279 112 aa10.74□□□□□ -0.69
CXCL12-201ENST00000343575 E9PLD3 99 aa10.74□□□□□ -0.69
CXCL12-201ENST00000343575 ORM1P02763 201 aa10.74□□□□□ -0.69
CXCL12-201ENST00000343575 KRTAP10-11P60412 298 aa10.74□□□□□ -0.69
CXCL12-201ENST00000343575 PHLDA1Q8WV24 401 aaPredicted RBP10.74□□□□□ -0.69
CXCL12-201ENST00000343575 HHLA3Q9XRX5 114 aa10.74□□□□□ -0.69
CXCL12-201ENST00000343575 A0A1B0GV72 72 aa10.73□□□□□ -0.69
CXCL12-201ENST00000343575 TEX48A0A1B0GUV7 120 aa10.72□□□□□ -0.69
CXCL12-201ENST00000343575 PRSS1P07477 247 aa10.72□□□□□ -0.69
CXCL12-201ENST00000343575 FXYD2P54710 66 aa10.72□□□□□ -0.69
CXCL12-201ENST00000343575 EGFEM1PQ0D2K5 195 aa10.72□□□□□ -0.69
CXCL12-201ENST00000343575 ANXA2RQ3ZCQ2 193 aa10.72□□□□□ -0.69
CXCL12-201ENST00000343575 GTSCR1Q86UQ5 136 aa10.72□□□□□ -0.69
CXCL12-201ENST00000343575 Q8N8P6 123 aa10.72□□□□□ -0.69
CXCL12-201ENST00000343575 NAA38Q9BRA0 125 aaKnown RBP10.72□□□□□ -0.69
CXCL12-201ENST00000343575 TRBV25-1A0A075B6N4 114 aa10.72□□□□□ -0.69
CXCL12-201ENST00000343575 PRSS47A8MTI9 375 aa10.72□□□□□ -0.69
CXCL12-201ENST00000343575 RNF185Q96GF1 192 aa10.71□□□□□ -0.69
CXCL12-201ENST00000343575 SPATA25Q9BR10 227 aa10.71□□□□□ -0.69
CXCL12-201ENST00000343575 GNRH2O43555 120 aa10.7□□□□□ -0.7
CXCL12-201ENST00000343575 TNFRSF6BO95407 300 aa10.7□□□□□ -0.7
CXCL12-201ENST00000343575 RPL35AP18077 110 aaKnown RBP10.7□□□□□ -0.7
CXCL12-201ENST00000343575 XCL2Q9UBD3 114 aa10.7□□□□□ -0.7
CXCL12-201ENST00000343575 GAGE12HA6NDE8 117 aa10.7□□□□□ -0.7
CXCL12-201ENST00000343575 IGLL5B9A064 214 aa10.7□□□□□ -0.7
CXCL12-201ENST00000343575 AZU1P20160 251 aa10.7□□□□□ -0.7
CXCL12-201ENST00000343575 PLNP26678 52 aa10.7□□□□□ -0.7
CXCL12-201ENST00000343575 SPANXB1Q9NS25 103 aaPredicted RBP10.7□□□□□ -0.7
CXCL12-201ENST00000343575 PRM2P04554 102 aa10.69□□□□□ -0.7
CXCL12-201ENST00000343575 C1orf158Q8N1D5 194 aa10.69□□□□□ -0.7
CXCL12-201ENST00000343575 ZNF479Q96JC4 524 aa10.69□□□□□ -0.7
CXCL12-201ENST00000343575 NHP2Q9NX24 153 aaKnown RBP10.69□□□□□ -0.7
CXCL12-201ENST00000343575 IGKV2D-26A0A0A0MRZ7 120 aa10.68□□□□□ -0.7
CXCL12-201ENST00000343575 SMKR1H3BMG3 65 aa10.68□□□□□ -0.7
CXCL12-201ENST00000343575 RNASE3P12724 160 aaKnown RBP10.68□□□□□ -0.7
CXCL12-201ENST00000343575 ZC2HC1BQ5TFG8 222 aa10.68□□□□□ -0.7
CXCL12-201ENST00000343575 CSNK1G2-AS1Q8NCQ2 148 aa10.68□□□□□ -0.7
CXCL12-201ENST00000343575 C18orf15Q96N68 181 aa10.68□□□□□ -0.7
CXCL12-201ENST00000343575 A0A1B0GWB2 263 aa10.67□□□□□ -0.7
CXCL12-201ENST00000343575 SPRY2O43597 315 aa10.67□□□□□ -0.7
CXCL12-201ENST00000343575 FAM159AQ6UWV7 190 aa10.67□□□□□ -0.7
CXCL12-201ENST00000343575 MTURNQ8N3F0 131 aa10.67□□□□□ -0.7
CXCL12-201ENST00000343575 MUC4Q99102 2169 aa10.66□□□□□ -0.7
CXCL12-201ENST00000343575 IGHV1OR15-1A0A075B7D0 117 aa10.66□□□□□ -0.7
CXCL12-201ENST00000343575 A0A087WX48 190 aa10.66□□□□□ -0.7
CXCL12-201ENST00000343575 TRAV12-1A0A0B4J245 112 aa10.66□□□□□ -0.7
CXCL12-201ENST00000343575 LAGE3Q14657 143 aa10.66□□□□□ -0.7
CXCL12-201ENST00000343575 C12orf74Q32Q52 190 aa10.66□□□□□ -0.7
CXCL12-201ENST00000343575 IGLV2-18A0A075B6J9 118 aa10.66□□□□□ -0.7
CXCL12-201ENST00000343575 RRN3P1Q2M238 152 aa10.66□□□□□ -0.7
CXCL12-201ENST00000343575 GAGE13Q4V321 117 aa10.66□□□□□ -0.7
CXCL12-201ENST00000343575 ATP6V0E2Q8NHE4 81 aa10.66□□□□□ -0.7
CXCL12-201ENST00000343575 MDFICQ9P1T7 246 aa10.66□□□□□ -0.7
CXCL12-201ENST00000343575 NOTCH1P46531 2555 aa10.65□□□□□ -0.7
CXCL12-201ENST00000343575 H3BVH4 76 aa10.65□□□□□ -0.7
CXCL12-201ENST00000343575 INSP01308 110 aa10.65□□□□□ -0.7
CXCL12-201ENST00000343575 TCTAP57738 103 aa10.65□□□□□ -0.7
CXCL12-201ENST00000343575 MSRB1Q9NZV6 116 aa10.65□□□□□ -0.7
CXCL12-201ENST00000343575 MGAM2Q2M2H8 2515 aa10.65□□□□□ -0.7
CXCL12-201ENST00000343575 IGHV3-16A0A0C4DH30 117 aa10.64□□□□□ -0.71
CXCL12-201ENST00000343575 K7EMI3 77 aa10.64□□□□□ -0.71
CXCL12-201ENST00000343575 MORN3Q6PF18 240 aaPredicted RBP10.64□□□□□ -0.71
CXCL12-201ENST00000343575 GTSF1LQ9H1H1 148 aa10.64□□□□□ -0.71
CXCL12-201ENST00000343575 K7ERJ3 54 aa10.64□□□□□ -0.71
CXCL12-201ENST00000343575 IGHV4-30-4P0DP06 118 aa10.64□□□□□ -0.71
CXCL12-201ENST00000343575 ASIPP42127 132 aa10.64□□□□□ -0.71
CXCL12-201ENST00000343575 DNAH3Q8TD57 4116 aa10.64□□□□□ -0.71
CXCL12-201ENST00000343575 HIST1H4GQ99525 98 aa10.64□□□□□ -0.71
CXCL12-201ENST00000343575 LINC00467Q9BRT7 94 aa10.64□□□□□ -0.71
CXCL12-201ENST00000343575 IGHV4-4A0A075B6R2 117 aa10.63□□□□□ -0.71
CXCL12-201ENST00000343575 H7C1H1 209 aa10.63□□□□□ -0.71
CXCL12-201ENST00000343575 SMAGPQ0VAQ4 97 aa10.63□□□□□ -0.71
CXCL12-201ENST00000343575 WFDC2Q14508 124 aa10.63□□□□□ -0.71
CXCL12-201ENST00000343575 LINC01587Q99440 93 aa10.63□□□□□ -0.71
CXCL12-201ENST00000343575 VCX2Q9H322 139 aa10.63□□□□□ -0.71
CXCL12-201ENST00000343575 TMEM238LA0A1B0GVL6 79 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms