RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 UBE2D2P62837 147 aa10.53□□□□□ -0.72
TNFRSF12A-202ENST00000341627 UQCC3Q6UW78 93 aa10.53□□□□□ -0.72
TNFRSF12A-202ENST00000341627 NEXN-AS1Q8NBZ9 246 aa10.53□□□□□ -0.72
TNFRSF12A-202ENST00000341627 A0A1B0GUT8 65 aa10.52□□□□□ -0.73
TNFRSF12A-202ENST00000341627 DNAH10OSP0CZ25 163 aa10.52□□□□□ -0.73
TNFRSF12A-202ENST00000341627 BTF3P20290 206 aaKnown RBP10.52□□□□□ -0.73
TNFRSF12A-202ENST00000341627 PNRC1Q12796 327 aaPredicted RBP10.52□□□□□ -0.73
TNFRSF12A-202ENST00000341627 SUMO4Q6EEV6 95 aa10.52□□□□□ -0.73
TNFRSF12A-202ENST00000341627 C6orf223Q8N319 242 aa10.52□□□□□ -0.73
TNFRSF12A-202ENST00000341627 NAT8BQ9UHF3 227 aa10.52□□□□□ -0.73
TNFRSF12A-202ENST00000341627 HERC2O95714 4834 aa10.52□□□□□ -0.73
TNFRSF12A-202ENST00000341627 PKHD1P08F94 4074 aa10.51□□□□□ -0.73
TNFRSF12A-202ENST00000341627 IGHV3-38A0A0C4DH36 116 aa10.51□□□□□ -0.73
TNFRSF12A-202ENST00000341627 M0QY20 66 aa10.51□□□□□ -0.73
TNFRSF12A-202ENST00000341627 DNAJC30Q96LL9 226 aa10.51□□□□□ -0.73
TNFRSF12A-202ENST00000341627 KRTAP1-5Q9BYS1 174 aa10.51□□□□□ -0.73
TNFRSF12A-202ENST00000341627 TNFRSF18Q9Y5U5 241 aa10.51□□□□□ -0.73
TNFRSF12A-202ENST00000341627 KIAA1109Q2LD37 5005 aa10.51□□□□□ -0.73
TNFRSF12A-202ENST00000341627 DNAH11Q96DT5 4516 aa10.5□□□□□ -0.73
TNFRSF12A-202ENST00000341627 PKD1P98161 4303 aa10.5□□□□□ -0.73
TNFRSF12A-202ENST00000341627 DYNC1H1Q14204 4646 aaKnown RBP10.5□□□□□ -0.73
TNFRSF12A-202ENST00000341627 A0A1B0GVY2 172 aa10.5□□□□□ -0.73
TNFRSF12A-202ENST00000341627 RIGQ13278 110 aa10.5□□□□□ -0.73
TNFRSF12A-202ENST00000341627 RASL11AQ6T310 242 aa10.5□□□□□ -0.73
TNFRSF12A-202ENST00000341627 C10orf126Q8N4M7 172 aa10.5□□□□□ -0.73
TNFRSF12A-202ENST00000341627 NUP35Q8NFH5 326 aa10.5□□□□□ -0.73
TNFRSF12A-202ENST00000341627 SMIM27A0A1W2PRY6 76 aa10.49□□□□□ -0.73
TNFRSF12A-202ENST00000341627 PPP1R2P9O14990 202 aa10.49□□□□□ -0.73
TNFRSF12A-202ENST00000341627 LINC01556Q5JQF7 62 aa10.49□□□□□ -0.73
TNFRSF12A-202ENST00000341627 DAZ4Q86SG3 579 aaKnown RBP10.49□□□□□ -0.73
TNFRSF12A-202ENST00000341627 DAZ3Q9NR90 486 aaKnown RBP10.49□□□□□ -0.73
TNFRSF12A-202ENST00000341627 PRSS29PA6NIE9 313 aa10.48□□□□□ -0.73
TNFRSF12A-202ENST00000341627 TMEM97Q5BJF2 176 aa10.48□□□□□ -0.73
TNFRSF12A-202ENST00000341627 COMMD7Q86VX2 200 aa10.48□□□□□ -0.73
TNFRSF12A-202ENST00000341627 FRZBQ92765 325 aa10.47□□□□□ -0.73
TNFRSF12A-202ENST00000341627 TMEM191AQ9H0A3 160 aa10.47□□□□□ -0.73
TNFRSF12A-202ENST00000341627 NIT2Q9NQR4 276 aa10.47□□□□□ -0.73
TNFRSF12A-202ENST00000341627 TMEM218A2RU14 115 aa10.46□□□□□ -0.73
TNFRSF12A-202ENST00000341627 MT-ND4LP03901 98 aa10.46□□□□□ -0.73
TNFRSF12A-202ENST00000341627 URGCP-MRPS24S4R325 110 aa10.46□□□□□ -0.73
TNFRSF12A-202ENST00000341627 TRBV6-8A0A0A6YYG3 113 aa10.45□□□□□ -0.74
TNFRSF12A-202ENST00000341627 F8W036 122 aa10.45□□□□□ -0.74
TNFRSF12A-202ENST00000341627 IGHV3-30P01768 117 aa10.45□□□□□ -0.74
TNFRSF12A-202ENST00000341627 IGHV3-33P01772 117 aa10.45□□□□□ -0.74
TNFRSF12A-202ENST00000341627 IGHV3-30-3P0DP02 117 aa10.45□□□□□ -0.74
TNFRSF12A-202ENST00000341627 IGHV3-30-5P0DP03 117 aa10.45□□□□□ -0.74
TNFRSF12A-202ENST00000341627 KCNIP4Q6PIL6 250 aa10.45□□□□□ -0.74
TNFRSF12A-202ENST00000341627 NFE4Q86UQ8 179 aa10.45□□□□□ -0.74
TNFRSF12A-202ENST00000341627 GATD1Q8NB37 220 aa10.45□□□□□ -0.74
TNFRSF12A-202ENST00000341627 ANAPC16Q96DE5 110 aa10.45□□□□□ -0.74
TNFRSF12A-202ENST00000341627 TRAV26-2A0A0B4J265 109 aa10.44□□□□□ -0.74
TNFRSF12A-202ENST00000341627 A0A1B0GW15 77 aa10.44□□□□□ -0.74
TNFRSF12A-202ENST00000341627 LINC00862A6NCI5 91 aa10.44□□□□□ -0.74
TNFRSF12A-202ENST00000341627 S100A8P05109 93 aa10.44□□□□□ -0.74
TNFRSF12A-202ENST00000341627 PKIAP61925 76 aa10.43□□□□□ -0.74
TNFRSF12A-202ENST00000341627 SEC11CQ9BY50 192 aa10.43□□□□□ -0.74
TNFRSF12A-202ENST00000341627 A0A087WX48 190 aa10.42□□□□□ -0.74
TNFRSF12A-202ENST00000341627 IBA57-AS1B1ANH7 110 aa10.42□□□□□ -0.74
TNFRSF12A-202ENST00000341627 ADCYAP1P18509 176 aa10.42□□□□□ -0.74
TNFRSF12A-202ENST00000341627 CAMPP49913 170 aa10.42□□□□□ -0.74
TNFRSF12A-202ENST00000341627 NIT1Q86X76 327 aa10.42□□□□□ -0.74
TNFRSF12A-202ENST00000341627 MRAP2Q96G30 205 aa10.42□□□□□ -0.74
TNFRSF12A-202ENST00000341627 CHCHD7Q9BUK0 85 aa10.42□□□□□ -0.74
TNFRSF12A-202ENST00000341627 TRBV25-1A0A075B6N4 114 aa10.41□□□□□ -0.74
TNFRSF12A-202ENST00000341627 TMEM262E9PQX1 116 aa10.41□□□□□ -0.74
TNFRSF12A-202ENST00000341627 RAB4AP20338 218 aa10.41□□□□□ -0.74
TNFRSF12A-202ENST00000341627 AMN1Q8IY45 258 aa10.41□□□□□ -0.74
TNFRSF12A-202ENST00000341627 RPL39LQ96EH5 51 aaKnown RBP10.41□□□□□ -0.74
TNFRSF12A-202ENST00000341627 CHCHD5Q9BSY4 110 aa10.41□□□□□ -0.74
TNFRSF12A-202ENST00000341627 IGHV1-24A0A0C4DH33 117 aa10.4□□□□□ -0.74
TNFRSF12A-202ENST00000341627 HBBP68871 147 aa10.4□□□□□ -0.74
TNFRSF12A-202ENST00000341627 TNP2Q05952 138 aa10.4□□□□□ -0.74
TNFRSF12A-202ENST00000341627 COTL1Q14019 142 aa10.4□□□□□ -0.74
TNFRSF12A-202ENST00000341627 LAGE3Q14657 143 aa10.4□□□□□ -0.74
TNFRSF12A-202ENST00000341627 ELOBQ15370 118 aa10.4□□□□□ -0.74
TNFRSF12A-202ENST00000341627 MRPL54Q6P161 138 aaKnown RBP10.4□□□□□ -0.74
TNFRSF12A-202ENST00000341627 NTM-AS1Q6ZSK4 140 aa10.4□□□□□ -0.74
TNFRSF12A-202ENST00000341627 ATP5L2Q7Z4Y8 100 aa10.4□□□□□ -0.74
TNFRSF12A-202ENST00000341627 RNF185Q96GF1 192 aa10.4□□□□□ -0.74
TNFRSF12A-202ENST00000341627 PPP1R17O96001 155 aa10.39□□□□□ -0.75
TNFRSF12A-202ENST00000341627 IQCJQ1A5X6 159 aa10.39□□□□□ -0.75
TNFRSF12A-202ENST00000341627 Q6ZRN7 208 aaPredicted RBP10.39□□□□□ -0.75
TNFRSF12A-202ENST00000341627 Q8N3U1 123 aa10.39□□□□□ -0.75
TNFRSF12A-202ENST00000341627 TRBV6-5A0A0K0K1A5 114 aa10.38□□□□□ -0.75
TNFRSF12A-202ENST00000341627 FAM104BQ5XKR9 115 aa10.38□□□□□ -0.75
TNFRSF12A-202ENST00000341627 CTDSP1Q9GZU7 261 aa10.38□□□□□ -0.75
TNFRSF12A-202ENST00000341627 ST20Q9HBF5 79 aa10.38□□□□□ -0.75
TNFRSF12A-202ENST00000341627 TRAV8-3A0A0A6YYJ7 113 aa10.37□□□□□ -0.75
TNFRSF12A-202ENST00000341627 A0A1B0GXF2 115 aa10.37□□□□□ -0.75
TNFRSF12A-202ENST00000341627 SDHAF1A6NFY7 115 aa10.37□□□□□ -0.75
TNFRSF12A-202ENST00000341627 TMEM243Q9BU79 118 aa10.37□□□□□ -0.75
TNFRSF12A-202ENST00000341627 Q9HAA7 133 aa10.37□□□□□ -0.75
TNFRSF12A-202ENST00000341627 PSCAO43653 123 aa10.36□□□□□ -0.75
TNFRSF12A-202ENST00000341627 NCR2O95944 276 aa10.36□□□□□ -0.75
TNFRSF12A-202ENST00000341627 PMCHP20382 165 aa10.36□□□□□ -0.75
TNFRSF12A-202ENST00000341627 AMTP48728 403 aa10.36□□□□□ -0.75
TNFRSF12A-202ENST00000341627 IMMP2LQ96T52 175 aa10.36□□□□□ -0.75
TNFRSF12A-202ENST00000341627 KLK12Q9UKR0 248 aa10.36□□□□□ -0.75
TNFRSF12A-202ENST00000341627 RYR1P21817 5038 aa10.35□□□□□ -0.75
TNFRSF12A-202ENST00000341627 LRP1BQ9NZR2 4599 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms