RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 C11orf1Q9H5F2 150 aa13.53□□□□□ -0.24
SYDE2-202ENST00000341460 MAPKAPK5-AS1Q8N8E1 139 aa13.53□□□□□ -0.24
SYDE2-202ENST00000341460 CAMK2N2Q96S95 79 aa13.53□□□□□ -0.24
SYDE2-202ENST00000341460 NOTCH3Q9UM47 2321 aa13.53□□□□□ -0.24
SYDE2-202ENST00000341460 CTSZQ9UBR2 303 aa13.53□□□□□ -0.24
SYDE2-202ENST00000341460 C20orf203Q8NBC4 194 aa13.52□□□□□ -0.24
SYDE2-202ENST00000341460 ZNF407Q9C0G0 2248 aa13.52□□□□□ -0.25
SYDE2-202ENST00000341460 IGLV10-54A0A075B6I4 117 aa13.52□□□□□ -0.25
SYDE2-202ENST00000341460 HELZP42694 1942 aaKnown RBP13.51□□□□□ -0.25
SYDE2-202ENST00000341460 IGHV4-59P01825 116 aa13.51□□□□□ -0.25
SYDE2-202ENST00000341460 PRR15LQ9BU68 103 aa13.51□□□□□ -0.25
SYDE2-202ENST00000341460 IGKV1-17P01599 117 aa13.51□□□□□ -0.25
SYDE2-202ENST00000341460 K7ERS5 55 aa13.51□□□□□ -0.25
SYDE2-202ENST00000341460 C11orf53Q8IXP5 236 aa13.51□□□□□ -0.25
SYDE2-202ENST00000341460 SCXQ7RTU7 201 aa13.51□□□□□ -0.25
SYDE2-202ENST00000341460 FAM19A3Q7Z5A8 133 aa13.51□□□□□ -0.25
SYDE2-202ENST00000341460 NACAE9PAV3 2078 aa13.5□□□□□ -0.25
SYDE2-202ENST00000341460 MDFICQ9P1T7 246 aa13.5□□□□□ -0.25
SYDE2-202ENST00000341460 IGLV2-8P01709 118 aa13.5□□□□□ -0.25
SYDE2-202ENST00000341460 I3L2K1 104 aa13.5□□□□□ -0.25
SYDE2-202ENST00000341460 UFSP1Q6NVU6 142 aa13.5□□□□□ -0.25
SYDE2-202ENST00000341460 ZMAT4Q9H898 229 aa13.5□□□□□ -0.25
SYDE2-202ENST00000341460 K7EQD1 137 aa13.5□□□□□ -0.25
SYDE2-202ENST00000341460 UBE2AP49459 152 aa13.5□□□□□ -0.25
SYDE2-202ENST00000341460 SHISA2Q6UWI4 295 aa13.5□□□□□ -0.25
SYDE2-202ENST00000341460 NBASA2RRP1 2371 aa13.5□□□□□ -0.25
SYDE2-202ENST00000341460 NEXN-AS1Q8NBZ9 246 aa13.49□□□□□ -0.25
SYDE2-202ENST00000341460 TRBV27A0A0K0K1C4 114 aa13.49□□□□□ -0.25
SYDE2-202ENST00000341460 GRNP28799 593 aaKnown RBP13.49□□□□□ -0.25
SYDE2-202ENST00000341460 IGFL2Q6UWQ7 119 aa13.49□□□□□ -0.25
SYDE2-202ENST00000341460 CCL24O00175 119 aa13.48□□□□□ -0.25
SYDE2-202ENST00000341460 TIRAPP58753 221 aa13.48□□□□□ -0.25
SYDE2-202ENST00000341460 C9orf47Q6ZRZ4 202 aa13.48□□□□□ -0.25
SYDE2-202ENST00000341460 KIAA1671Q9BY89 1806 aa13.48□□□□□ -0.25
SYDE2-202ENST00000341460 PLXND1Q9Y4D7 1925 aa13.48□□□□□ -0.25
SYDE2-202ENST00000341460 IGKV4-1P06312 121 aa13.48□□□□□ -0.25
SYDE2-202ENST00000341460 KMT2EQ8IZD2 1858 aa13.48□□□□□ -0.25
SYDE2-202ENST00000341460 COX7BP24311 80 aa13.48□□□□□ -0.25
SYDE2-202ENST00000341460 IGHV4OR15-8A0A075B7B6 117 aa13.47□□□□□ -0.25
SYDE2-202ENST00000341460 A0A087WW49 117 aa13.47□□□□□ -0.25
SYDE2-202ENST00000341460 H0Y9J4 135 aa13.47□□□□□ -0.25
SYDE2-202ENST00000341460 IGLV2-23P01705 113 aa13.47□□□□□ -0.25
SYDE2-202ENST00000341460 SPTAN1Q13813 2472 aaKnown RBP13.47□□□□□ -0.25
SYDE2-202ENST00000341460 K7EIM0 57 aa13.46□□□□□ -0.25
SYDE2-202ENST00000341460 NRGNQ92686 78 aa13.46□□□□□ -0.25
SYDE2-202ENST00000341460 DEFB113Q30KQ7 82 aa13.46□□□□□ -0.26
SYDE2-202ENST00000341460 DKK4Q9UBT3 224 aa13.46□□□□□ -0.26
SYDE2-202ENST00000341460 NPBQ8NG41 125 aa13.45□□□□□ -0.26
SYDE2-202ENST00000341460 PRAC2D3DTV9 90 aa13.45□□□□□ -0.26
SYDE2-202ENST00000341460 WT1P19544 449 aaPredicted RBP13.45□□□□□ -0.26
SYDE2-202ENST00000341460 PLXNA2O75051 1894 aa13.45□□□□□ -0.26
SYDE2-202ENST00000341460 EML6Q6ZMW3 1958 aa13.45□□□□□ -0.26
SYDE2-202ENST00000341460 Q6JHZ5 121 aa13.45□□□□□ -0.26
SYDE2-202ENST00000341460 IGF2-ASQ6U949 168 aa13.45□□□□□ -0.26
SYDE2-202ENST00000341460 MBD6Q96DN6 1003 aa13.44□□□□□ -0.26
SYDE2-202ENST00000341460 ANAPC1Q9H1A4 1944 aa13.44□□□□□ -0.26
SYDE2-202ENST00000341460 PRO0628Q9UI54 55 aa13.44□□□□□ -0.26
SYDE2-202ENST00000341460 IGHV4-61A0A0C4DH41 118 aa13.44□□□□□ -0.26
SYDE2-202ENST00000341460 LST1O00453 97 aa13.44□□□□□ -0.26
SYDE2-202ENST00000341460 GYPEP15421 78 aa13.43□□□□□ -0.26
SYDE2-202ENST00000341460 TRBV7-3A0A075B6L6 115 aa13.43□□□□□ -0.26
SYDE2-202ENST00000341460 NDUFA1O15239 70 aa13.43□□□□□ -0.26
SYDE2-202ENST00000341460 SLPIP03973 132 aa13.43□□□□□ -0.26
SYDE2-202ENST00000341460 NOTCH4Q99466 2003 aa13.43□□□□□ -0.26
SYDE2-202ENST00000341460 CREBBPQ92793 2442 aa13.43□□□□□ -0.26
SYDE2-202ENST00000341460 LINC00322Q6ZN03 302 aaPredicted RBP13.43□□□□□ -0.26
SYDE2-202ENST00000341460 PPDPFQ9H3Y8 114 aa13.43□□□□□ -0.26
SYDE2-202ENST00000341460 DEFB136Q30KP8 78 aa13.42□□□□□ -0.26
SYDE2-202ENST00000341460 SOSTDC1Q6X4U4 206 aa13.42□□□□□ -0.26
SYDE2-202ENST00000341460 MIFP14174 115 aa13.42□□□□□ -0.26
SYDE2-202ENST00000341460 SEM1Q6ZVN7 128 aa13.42□□□□□ -0.26
SYDE2-202ENST00000341460 SPRY4Q9C004 299 aa13.42□□□□□ -0.26
SYDE2-202ENST00000341460 PLCE1Q9P212 2302 aa13.42□□□□□ -0.26
SYDE2-202ENST00000341460 TMEM223A0PJW6 202 aa13.42□□□□□ -0.26
SYDE2-202ENST00000341460 IGHV3-30P01768 117 aa13.42□□□□□ -0.26
SYDE2-202ENST00000341460 IGHV3-30-5P0DP03 117 aa13.42□□□□□ -0.26
SYDE2-202ENST00000341460 SPRNQ5BIV9 151 aa13.42□□□□□ -0.26
SYDE2-202ENST00000341460 C9orf66Q5T8R8 295 aa13.42□□□□□ -0.26
SYDE2-202ENST00000341460 IGHV7-81A0A0B4J1V7 117 aa13.42□□□□□ -0.26
SYDE2-202ENST00000341460 CACNA1HO95180 2353 aa13.42□□□□□ -0.26
SYDE2-202ENST00000341460 LINC00308Q8TCZ7 52 aa13.41□□□□□ -0.26
SYDE2-202ENST00000341460 TANC1Q9C0D5 1861 aa13.41□□□□□ -0.26
SYDE2-202ENST00000341460 RNF138Q8WVD3 245 aa13.41□□□□□ -0.26
SYDE2-202ENST00000341460 LOC107984640A0A0U1RRK4 108 aa13.41□□□□□ -0.26
SYDE2-202ENST00000341460 IGHV4-38-2P0DP08 117 aa13.41□□□□□ -0.26
SYDE2-202ENST00000341460 KRTAP27-1Q3LI81 207 aa13.41□□□□□ -0.26
SYDE2-202ENST00000341460 IGHV4-30-2A0A087WSY4 118 aa13.4□□□□□ -0.26
SYDE2-202ENST00000341460 APRG1Q8IVJ8 170 aa13.4□□□□□ -0.26
SYDE2-202ENST00000341460 CTSGP08311 255 aa13.4□□□□□ -0.26
SYDE2-202ENST00000341460 IGLV11-55A0A075B6I3 123 aa13.4□□□□□ -0.26
SYDE2-202ENST00000341460 SLURP1P55000 103 aa13.4□□□□□ -0.26
SYDE2-202ENST00000341460 ZNF22P17026 224 aaPredicted RBP13.39□□□□□ -0.27
SYDE2-202ENST00000341460 AJUBAQ96IF1 538 aa13.39□□□□□ -0.27
SYDE2-202ENST00000341460 TNRC6BQ9UPQ9 1833 aaKnown RBP13.39□□□□□ -0.27
SYDE2-202ENST00000341460 TRAV7A0A075B6U4 112 aa13.38□□□□□ -0.27
SYDE2-202ENST00000341460 PRR4Q16378 134 aa13.38□□□□□ -0.27
SYDE2-202ENST00000341460 Q6ZSR3 168 aa13.38□□□□□ -0.27
SYDE2-202ENST00000341460 C16orf74Q96GX8 76 aa13.38□□□□□ -0.27
SYDE2-202ENST00000341460 H7C423 109 aa13.38□□□□□ -0.27
SYDE2-202ENST00000341460 SPAG11BQ08648 103 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms