RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 POLR2KP53803 58 aaKnown RBP14.83□□□□□ -0.03
SPG7-202ENST00000341316 SCGB2A2Q13296 93 aa14.82□□□□□ -0.04
SPG7-202ENST00000341316 ZNF815PA8K554 130 aa14.82□□□□□ -0.04
SPG7-202ENST00000341316 CRYGDP07320 174 aa14.82□□□□□ -0.04
SPG7-202ENST00000341316 DEFB131AP59861 70 aa14.82□□□□□ -0.04
SPG7-202ENST00000341316 MTURNQ8N3F0 131 aa14.82□□□□□ -0.04
SPG7-202ENST00000341316 SETD2Q9BYW2 2564 aaPredicted RBP14.81□□□□□ -0.04
SPG7-202ENST00000341316 KHDC1LQ5JSQ8 128 aa14.81□□□□□ -0.04
SPG7-202ENST00000341316 PLEKHB2Q96CS7 222 aa14.81□□□□□ -0.04
SPG7-202ENST00000341316 RPL32P62910 135 aaKnown RBP14.81□□□□□ -0.04
SPG7-202ENST00000341316 MORN3Q6PF18 240 aaPredicted RBP14.81□□□□□ -0.04
SPG7-202ENST00000341316 SH2D6Q7Z4S9 175 aa14.81□□□□□ -0.04
SPG7-202ENST00000341316 C4orf3Q8WVX3 66 aa14.81□□□□□ -0.04
SPG7-202ENST00000341316 TMEM61Q8N0U2 210 aa14.8□□□□□ -0.04
SPG7-202ENST00000341316 DLX4Q92988 240 aaPredicted RBP14.8□□□□□ -0.04
SPG7-202ENST00000341316 ITPR2Q14571 2701 aa14.8□□□□□ -0.04
SPG7-202ENST00000341316 RBMY1BA6NDE4 496 aaKnown RBP14.8□□□□□ -0.04
SPG7-202ENST00000341316 RBMY1EA6NEQ0 496 aaKnown RBP14.8□□□□□ -0.04
SPG7-202ENST00000341316 TSHBP01222 138 aa14.8□□□□□ -0.04
SPG7-202ENST00000341316 RBMY1DP0C7P1 496 aaKnown RBP14.8□□□□□ -0.04
SPG7-202ENST00000341316 ETDBQ3ZM63 59 aa14.8□□□□□ -0.04
SPG7-202ENST00000341316 ZFP2Q6ZN57 461 aa14.8□□□□□ -0.04
SPG7-202ENST00000341316 TP53TG1Q9Y2A0 90 aa14.8□□□□□ -0.04
SPG7-202ENST00000341316 SDHAF1A6NFY7 115 aa14.79□□□□□ -0.04
SPG7-202ENST00000341316 CD300EQ496F6 205 aaPredicted RBP14.79□□□□□ -0.04
SPG7-202ENST00000341316 GAGE13Q4V321 117 aa14.79□□□□□ -0.04
SPG7-202ENST00000341316 SCGB1D4Q6XE38 83 aa14.79□□□□□ -0.04
SPG7-202ENST00000341316 SYT8Q8NBV8 401 aa14.79□□□□□ -0.04
SPG7-202ENST00000341316 M0QY20 66 aa14.78□□□□□ -0.04
SPG7-202ENST00000341316 EMP1P54849 157 aa14.78□□□□□ -0.04
SPG7-202ENST00000341316 PRO0461Q9UI25 63 aa14.78□□□□□ -0.04
SPG7-202ENST00000341316 PDZD2O15018 2839 aa14.78□□□□□ -0.04
SPG7-202ENST00000341316 IGLV4-69A0A075B6H9 119 aa14.78□□□□□ -0.04
SPG7-202ENST00000341316 C11orf86A6NJI1 115 aa14.78□□□□□ -0.04
SPG7-202ENST00000341316 VCYO14598 125 aa14.78□□□□□ -0.04
SPG7-202ENST00000341316 PRM2P04554 102 aa14.78□□□□□ -0.04
SPG7-202ENST00000341316 RPL39P62891 51 aaKnown RBP14.78□□□□□ -0.04
SPG7-202ENST00000341316 ZNF56Q15929 161 aa14.78□□□□□ -0.04
SPG7-202ENST00000341316 Q6ZSV7 163 aa14.78□□□□□ -0.04
SPG7-202ENST00000341316 KLHL30-AS1Q8NEE0 82 aa14.78□□□□□ -0.04
SPG7-202ENST00000341316 PGPEP1Q9NXJ5 209 aa14.78□□□□□ -0.04
SPG7-202ENST00000341316 HELZ2Q9BYK8 2649 aaKnown RBP14.78□□□□□ -0.04
SPG7-202ENST00000341316 H3BMM0 161 aa14.77□□□□□ -0.04
SPG7-202ENST00000341316 ZNF876PQ49A33 203 aa14.77□□□□□ -0.04
SPG7-202ENST00000341316 TSSC4Q9Y5U2 329 aaPredicted RBP14.77□□□□□ -0.04
SPG7-202ENST00000341316 HTN1P15515 57 aa14.77□□□□□ -0.05
SPG7-202ENST00000341316 TRBV6-5A0A0K0K1A5 114 aa14.76□□□□□ -0.05
SPG7-202ENST00000341316 IGIPA6NJ69 53 aa14.76□□□□□ -0.05
SPG7-202ENST00000341316 PEMTQ9UBM1 199 aa14.76□□□□□ -0.05
SPG7-202ENST00000341316 MTORP42345 2549 aa14.76□□□□□ -0.05
SPG7-202ENST00000341316 TRBV27A0A0K0K1C4 114 aa14.76□□□□□ -0.05
SPG7-202ENST00000341316 SRSF9Q13242 221 aaKnown RBP eCLIP14.76□□□□□ -0.052e-7■■■□□ 15.7
SPG7-202ENST00000341316 MRPL16Q9NX20 251 aaKnown RBP14.76□□□□□ -0.05
SPG7-202ENST00000341316 DNAJC9-AS1A6NH13 148 aa14.75□□□□□ -0.05
SPG7-202ENST00000341316 A8MTW9 85 aa14.75□□□□□ -0.05
SPG7-202ENST00000341316 KIR2DL4Q99706 377 aa14.75□□□□□ -0.05
SPG7-202ENST00000341316 SPAG8Q99932 426 aaPredicted RBP14.75□□□□□ -0.05
SPG7-202ENST00000341316 GTSF1LQ9H1H1 148 aa14.75□□□□□ -0.05
SPG7-202ENST00000341316 ZNF256Q9Y2P7 627 aaPredicted RBP14.75□□□□□ -0.05
SPG7-202ENST00000341316 WNK1Q9H4A3 2382 aa14.75□□□□□ -0.05
SPG7-202ENST00000341316 ANK3Q12955 4377 aaKnown RBP14.74□□□□□ -0.05
SPG7-202ENST00000341316 TMEM238LA0A1B0GVL6 79 aa14.74□□□□□ -0.05
SPG7-202ENST00000341316 LINC01549A6NIU2 74 aa14.74□□□□□ -0.05
SPG7-202ENST00000341316 A6NJY4 79 aa14.74□□□□□ -0.05
SPG7-202ENST00000341316 J3QR89 54 aa14.74□□□□□ -0.05
SPG7-202ENST00000341316 ESM1Q9NQ30 184 aa14.74□□□□□ -0.05
SPG7-202ENST00000341316 TRGV11A0A075B6L2 103 aa14.73□□□□□ -0.05
SPG7-202ENST00000341316 AZU1P20160 251 aa14.73□□□□□ -0.05
SPG7-202ENST00000341316 PMVKQ15126 192 aa14.73□□□□□ -0.05
SPG7-202ENST00000341316 TMEM86BQ8N661 226 aa14.73□□□□□ -0.05
SPG7-202ENST00000341316 GAGE12HA6NDE8 117 aa14.73□□□□□ -0.05
SPG7-202ENST00000341316 UBE2D1P51668 147 aa14.73□□□□□ -0.05
SPG7-202ENST00000341316 DEFB114Q30KQ6 69 aa14.73□□□□□ -0.05
SPG7-202ENST00000341316 C11orf44Q8N8P7 122 aa14.73□□□□□ -0.05
SPG7-202ENST00000341316 HERVK_113P61574 105 aa14.72□□□□□ -0.05
SPG7-202ENST00000341316 SIGMAR1Q99720 223 aa14.72□□□□□ -0.05
SPG7-202ENST00000341316 MAP6D1Q9H9H5 199 aa14.72□□□□□ -0.05
SPG7-202ENST00000341316 NIPBLQ6KC79 2804 aaeCLIP14.72□□□□□ -0.05
SPG7-202ENST00000341316 TRAV2A0A0B4J234 112 aa14.72□□□□□ -0.05
SPG7-202ENST00000341316 PAPPA-AS1Q5QFB9 102 aa14.72□□□□□ -0.05
SPG7-202ENST00000341316 DYNLRB2Q8TF09 96 aa14.72□□□□□ -0.05
SPG7-202ENST00000341316 INSL3P51460 131 aa14.71□□□□□ -0.05
SPG7-202ENST00000341316 SFTA2Q6UW10 78 aa14.71□□□□□ -0.05
SPG7-202ENST00000341316 TSPAN13O95857 204 aa14.71□□□□□ -0.06
SPG7-202ENST00000341316 TMEM141Q96I45 108 aa14.71□□□□□ -0.06
SPG7-202ENST00000341316 A0A0J9YY99 117 aa14.7□□□□□ -0.06
SPG7-202ENST00000341316 TSPEAR-AS2P59090 65 aa14.7□□□□□ -0.06
SPG7-202ENST00000341316 TRPT1Q86TN4 253 aaKnown RBP14.7□□□□□ -0.06
SPG7-202ENST00000341316 RAX2Q96IS3 184 aa14.7□□□□□ -0.06
SPG7-202ENST00000341316 TIMM17AQ99595 171 aa14.7□□□□□ -0.06
SPG7-202ENST00000341316 IGHV3-73A0A0B4J1V6 119 aa14.69□□□□□ -0.06
SPG7-202ENST00000341316 APOMO95445 188 aa14.69□□□□□ -0.06
SPG7-202ENST00000341316 PROK1P58294 105 aa14.69□□□□□ -0.06
SPG7-202ENST00000341316 SMAGPQ0VAQ4 97 aa14.69□□□□□ -0.06
SPG7-202ENST00000341316 P0DMU3 169 aa14.69□□□□□ -0.06
SPG7-202ENST00000341316 FAM231AP0DMU4 169 aa14.69□□□□□ -0.06
SPG7-202ENST00000341316 FAM231CP0DMU5 169 aa14.69□□□□□ -0.06
SPG7-202ENST00000341316 TMEM170BQ5T4T1 132 aa14.69□□□□□ -0.06
SPG7-202ENST00000341316 ZNRF2Q8NHG8 242 aa14.69□□□□□ -0.06
SPG7-202ENST00000341316 A0A1W2PRX2 142 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms