RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 ATP5G1P05496 136 aa8.98□□□□□ -0.97
RTN3-203ENST00000341307 DSCR8Q96T75 97 aa8.98□□□□□ -0.97
RTN3-203ENST00000341307 TRAV41A0A0B4J266 112 aa8.97□□□□□ -0.97
RTN3-203ENST00000341307 IL17RELQ6ZVW7 336 aa8.97□□□□□ -0.97
RTN3-203ENST00000341307 COX8CQ7Z4L0 72 aa8.97□□□□□ -0.97
RTN3-203ENST00000341307 FAM19A4Q96LR4 140 aa8.97□□□□□ -0.97
RTN3-203ENST00000341307 SCGB3A1Q96QR1 104 aa8.97□□□□□ -0.97
RTN3-203ENST00000341307 BEX4Q9NWD9 120 aaPredicted RBP8.97□□□□□ -0.97
RTN3-203ENST00000341307 CCDC168Q8NDH2 2452 aa8.97□□□□□ -0.97
RTN3-203ENST00000341307 LY6LH3BQJ8 138 aa8.97□□□□□ -0.97
RTN3-203ENST00000341307 TRGV3P03979 118 aa8.97□□□□□ -0.97
RTN3-203ENST00000341307 SPANXDQ9BXN6 97 aa8.97□□□□□ -0.97
RTN3-203ENST00000341307 ZNF469Q96JG9 3925 aaPredicted RBP8.97□□□□□ -0.97
RTN3-203ENST00000341307 A0A0B4J2C4 111 aa8.96□□□□□ -0.97
RTN3-203ENST00000341307 H3BT86 120 aa8.96□□□□□ -0.97
RTN3-203ENST00000341307 TRIAP1O43715 76 aa8.96□□□□□ -0.97
RTN3-203ENST00000341307 TOMM6Q96B49 74 aa8.96□□□□□ -0.97
RTN3-203ENST00000341307 AMELXQ99217 191 aa8.96□□□□□ -0.97
RTN3-203ENST00000341307 JPT2Q9H910 190 aa8.96□□□□□ -0.97
RTN3-203ENST00000341307 TRACP01848 142 aa8.96□□□□□ -0.98
RTN3-203ENST00000341307 LYPD1Q8N2G4 141 aa8.96□□□□□ -0.98
RTN3-203ENST00000341307 ZNF256Q9Y2P7 627 aaPredicted RBP8.96□□□□□ -0.98
RTN3-203ENST00000341307 NAV2Q8IVL1 2488 aa8.96□□□□□ -0.98
RTN3-203ENST00000341307 TMEM258P61165 79 aa8.95□□□□□ -0.98
RTN3-203ENST00000341307 ERCC8Q13216 396 aa8.95□□□□□ -0.98
RTN3-203ENST00000341307 OXLD1Q5BKU9 147 aa8.95□□□□□ -0.98
RTN3-203ENST00000341307 TRBV30A0A0K0K1B3 111 aa8.95□□□□□ -0.98
RTN3-203ENST00000341307 Q1RN00 199 aa8.95□□□□□ -0.98
RTN3-203ENST00000341307 VMO1Q7Z5L0 202 aa8.95□□□□□ -0.98
RTN3-203ENST00000341307 DYNAPQ8N1N2 210 aa8.95□□□□□ -0.98
RTN3-203ENST00000341307 BPESC1Q9GZL8 116 aa8.95□□□□□ -0.98
RTN3-203ENST00000341307 PYGO1Q9Y3Y4 419 aa8.95□□□□□ -0.98
RTN3-203ENST00000341307 IGKV2-40A0A087WW87 121 aaPredicted RBP8.94□□□□□ -0.98
RTN3-203ENST00000341307 C11orf86A6NJI1 115 aa8.94□□□□□ -0.98
RTN3-203ENST00000341307 IGKV2D-40P01614 121 aaPredicted RBP8.94□□□□□ -0.98
RTN3-203ENST00000341307 MALP21145 153 aa8.94□□□□□ -0.98
RTN3-203ENST00000341307 PLGLAQ15195 96 aa8.94□□□□□ -0.98
RTN3-203ENST00000341307 PVRIGQ6DKI7 326 aa8.94□□□□□ -0.98
RTN3-203ENST00000341307 C5orf38Q86SI9 138 aa8.94□□□□□ -0.98
RTN3-203ENST00000341307 RPL27AP46776 148 aaKnown RBP8.94□□□□□ -0.98
RTN3-203ENST00000341307 Q8TAT8 98 aa8.94□□□□□ -0.98
RTN3-203ENST00000341307 DPM3Q9P2X0 92 aa8.94□□□□□ -0.98
RTN3-203ENST00000341307 MAST4O15021 2626 aa8.93□□□□□ -0.98
RTN3-203ENST00000341307 WNK2Q9Y3S1 2297 aa8.93□□□□□ -0.98
RTN3-203ENST00000341307 IGLV4-69A0A075B6H9 119 aa8.93□□□□□ -0.98
RTN3-203ENST00000341307 HIST1H4AP62805 103 aaKnown RBP8.93□□□□□ -0.98
RTN3-203ENST00000341307 EEF1AKMT3Q96AZ1 226 aa8.93□□□□□ -0.98
RTN3-203ENST00000341307 PRO0628Q9UI54 55 aa8.93□□□□□ -0.98
RTN3-203ENST00000341307 OTOGQ6ZRI0 2925 aa8.93□□□□□ -0.98
RTN3-203ENST00000341307 AKAP9Q99996 3911 aa8.93□□□□□ -0.98
RTN3-203ENST00000341307 SPRY2O43597 315 aa8.93□□□□□ -0.98
RTN3-203ENST00000341307 LINC00643Q86TS7 51 aa8.93□□□□□ -0.98
RTN3-203ENST00000341307 RNF152Q8N8N0 203 aa8.93□□□□□ -0.98
RTN3-203ENST00000341307 SHANK2-AS3Q9BTD1 123 aa8.93□□□□□ -0.98
RTN3-203ENST00000341307 TINCRA0A1B0GVN0 87 aa8.92□□□□□ -0.98
RTN3-203ENST00000341307 ODF3BA8MYP8 253 aa8.92□□□□□ -0.98
RTN3-203ENST00000341307 TEX22C9J3V5 150 aa8.92□□□□□ -0.98
RTN3-203ENST00000341307 M0R1W7 72 aa8.92□□□□□ -0.98
RTN3-203ENST00000341307 SMIM2Q9BVW6 85 aa8.92□□□□□ -0.98
RTN3-203ENST00000341307 TMEM223A0PJW6 202 aa8.92□□□□□ -0.98
RTN3-203ENST00000341307 H3BRN7 92 aa8.92□□□□□ -0.98
RTN3-203ENST00000341307 ABCA1O95477 2261 aa8.91□□□□□ -0.98
RTN3-203ENST00000341307 EDN2P20800 178 aa8.91□□□□□ -0.98
RTN3-203ENST00000341307 SDIM1Q6ZPB5 146 aa8.91□□□□□ -0.98
RTN3-203ENST00000341307 MUSTN1Q8IVN3 82 aa8.91□□□□□ -0.98
RTN3-203ENST00000341307 ACYP1P07311 99 aa8.91□□□□□ -0.98
RTN3-203ENST00000341307 LINC00336Q6ZUF6 198 aa8.91□□□□□ -0.98
RTN3-203ENST00000341307 UPK3BQ9BT76 320 aa8.91□□□□□ -0.98
RTN3-203ENST00000341307 CXCL5P42830 114 aa8.9□□□□□ -0.98
RTN3-203ENST00000341307 NSUN5P1Q3KNT7 163 aa8.9□□□□□ -0.98
RTN3-203ENST00000341307 ORMDL2Q53FV1 153 aa8.9□□□□□ -0.98
RTN3-203ENST00000341307 ANKRD17O75179 2603 aaKnown RBP8.9□□□□□ -0.99
RTN3-203ENST00000341307 SEC61GP60059 68 aa8.9□□□□□ -0.99
RTN3-203ENST00000341307 LMO4P61968 165 aa8.9□□□□□ -0.99
RTN3-203ENST00000341307 C2orf66Q6UXQ4 117 aa8.9□□□□□ -0.99
RTN3-203ENST00000341307 CLEC2BQ92478 149 aa8.9□□□□□ -0.99
RTN3-203ENST00000341307 C1orf43Q9BWL3 253 aa8.9□□□□□ -0.99
RTN3-203ENST00000341307 SIRPDQ9H106 197 aa8.9□□□□□ -0.99
RTN3-203ENST00000341307 NBR2O15453 112 aa8.89□□□□□ -0.99
RTN3-203ENST00000341307 RPL35AP18077 110 aaKnown RBP8.89□□□□□ -0.99
RTN3-203ENST00000341307 S4R3C0 116 aa8.89□□□□□ -0.99
RTN3-203ENST00000341307 ZANQ9Y493 2812 aa8.89□□□□□ -0.99
RTN3-203ENST00000341307 ATOX1O00244 68 aa8.89□□□□□ -0.99
RTN3-203ENST00000341307 AGPAT4-IT1Q9H0P7 198 aa8.89□□□□□ -0.99
RTN3-203ENST00000341307 MYO9AB2RTY4 2548 aa8.89□□□□□ -0.99
RTN3-203ENST00000341307 TRBV7-1A0A0A6YYK4 115 aa8.88□□□□□ -0.99
RTN3-203ENST00000341307 IGKV1-17P01599 117 aa8.88□□□□□ -0.99
RTN3-203ENST00000341307 ICOSQ9Y6W8 199 aa8.88□□□□□ -0.99
RTN3-203ENST00000341307 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.88□□□□□ -0.99
RTN3-203ENST00000341307 TRAV13-1A0A0B4J241 112 aa8.88□□□□□ -0.99
RTN3-203ENST00000341307 TSHBP01222 138 aa8.88□□□□□ -0.99
RTN3-203ENST00000341307 UBE2E1P51965 193 aa8.88□□□□□ -0.99
RTN3-203ENST00000341307 IGHV3OR16-10A0A075B7F0 116 aa8.87□□□□□ -0.99
RTN3-203ENST00000341307 J3QQQ9 107 aa8.87□□□□□ -0.99
RTN3-203ENST00000341307 LST1O00453 97 aa8.87□□□□□ -0.99
RTN3-203ENST00000341307 C10orf105Q8TEF2 133 aa8.87□□□□□ -0.99
RTN3-203ENST00000341307 CCL19Q99731 98 aa8.87□□□□□ -0.99
RTN3-203ENST00000341307 DPH3P1Q9H4G8 78 aa8.87□□□□□ -0.99
RTN3-203ENST00000341307 CREBBPQ92793 2442 aa8.87□□□□□ -0.99
RTN3-203ENST00000341307 NDPQ00604 133 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms