RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 GATA1P15976 413 aaPredicted RBP12.71□□□□□ -0.37
CDK11B-201ENST00000340677 DEFB108BQ8NET1 73 aa12.71□□□□□ -0.37
CDK11B-201ENST00000340677 ROS1P08922 2347 aa12.71□□□□□ -0.37
CDK11B-201ENST00000340677 CFHR3Q02985 330 aa12.71□□□□□ -0.37
CDK11B-201ENST00000340677 A0A087WVE0 104 aa12.7□□□□□ -0.38
CDK11B-201ENST00000340677 C20orf197Q8N268 126 aa12.7□□□□□ -0.38
CDK11B-201ENST00000340677 FAM216BQ8N7L0 139 aa12.7□□□□□ -0.38
CDK11B-201ENST00000340677 FAM167A-AS1Q96KT0 104 aa12.7□□□□□ -0.38
CDK11B-201ENST00000340677 HELZ2Q9BYK8 2649 aaKnown RBP12.7□□□□□ -0.38
CDK11B-201ENST00000340677 PKDREJQ9NTG1 2253 aa12.7□□□□□ -0.38
CDK11B-201ENST00000340677 SETXQ7Z333 2677 aaKnown RBP12.7□□□□□ -0.38
CDK11B-201ENST00000340677 TRBV30A0A0K0K1B3 111 aa12.7□□□□□ -0.38
CDK11B-201ENST00000340677 XCL1P47992 114 aa12.7□□□□□ -0.38
CDK11B-201ENST00000340677 Q6ZS46 218 aa12.7□□□□□ -0.38
CDK11B-201ENST00000340677 XCL2Q9UBD3 114 aa12.7□□□□□ -0.38
CDK11B-201ENST00000340677 TRAV3A0A0B4J244 114 aa12.69□□□□□ -0.38
CDK11B-201ENST00000340677 CKS2P33552 79 aa12.69□□□□□ -0.38
CDK11B-201ENST00000340677 C17orf58Q2M2W7 97 aa12.69□□□□□ -0.38
CDK11B-201ENST00000340677 COPS9Q8WXC6 57 aa12.69□□□□□ -0.38
CDK11B-201ENST00000340677 NDUFB3O43676 98 aa12.69□□□□□ -0.38
CDK11B-201ENST00000340677 MORN5Q5VZ52 161 aa12.69□□□□□ -0.38
CDK11B-201ENST00000340677 UNQ9165/PRO28630Q6UXU0 137 aa12.69□□□□□ -0.38
CDK11B-201ENST00000340677 BUB3O43684 328 aa12.68□□□□□ -0.38
CDK11B-201ENST00000340677 KLHL30-AS1Q8NEE0 82 aa12.68□□□□□ -0.38
CDK11B-201ENST00000340677 MPLKIPQ8TAP9 179 aa12.68□□□□□ -0.38
CDK11B-201ENST00000340677 F8VRH5 84 aa12.68□□□□□ -0.38
CDK11B-201ENST00000340677 IGHG2P01859 326 aa12.68□□□□□ -0.38
CDK11B-201ENST00000340677 C19orf84I3L1E1 186 aa12.67□□□□□ -0.38
CDK11B-201ENST00000340677 SPTBN1Q01082 2364 aaKnown RBP12.67□□□□□ -0.38
CDK11B-201ENST00000340677 SLC25A29Q8N8R3 303 aa12.67□□□□□ -0.38
CDK11B-201ENST00000340677 PRR26Q8N8Z3 221 aa12.67□□□□□ -0.38
CDK11B-201ENST00000340677 TIMM21Q9BVV7 248 aa12.67□□□□□ -0.38
CDK11B-201ENST00000340677 CTSZQ9UBR2 303 aa12.67□□□□□ -0.38
CDK11B-201ENST00000340677 LAMTOR3Q9UHA4 124 aa12.67□□□□□ -0.38
CDK11B-201ENST00000340677 TMEM223A0PJW6 202 aa12.66□□□□□ -0.38
CDK11B-201ENST00000340677 S100A7L2Q5SY68 101 aa12.66□□□□□ -0.38
CDK11B-201ENST00000340677 TM2D3Q9BRN9 247 aa12.66□□□□□ -0.38
CDK11B-201ENST00000340677 PAXXQ9BUH6 204 aa12.66□□□□□ -0.38
CDK11B-201ENST00000340677 ABCA4P78363 2273 aa12.66□□□□□ -0.38
CDK11B-201ENST00000340677 PROP1O75360 226 aa12.65□□□□□ -0.38
CDK11B-201ENST00000340677 C11orf68Q9H3H3 251 aaKnown RBP12.65□□□□□ -0.38
CDK11B-201ENST00000340677 RPL39P5Q59GN2 51 aa12.65□□□□□ -0.38
CDK11B-201ENST00000340677 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.65□□□□□ -0.38
CDK11B-201ENST00000340677 FANCD2OSQ96PS1 177 aa12.65□□□□□ -0.38
CDK11B-201ENST00000340677 BPESC1Q9GZL8 116 aa12.65□□□□□ -0.38
CDK11B-201ENST00000340677 A0A1W2PPR1 153 aa12.64□□□□□ -0.39
CDK11B-201ENST00000340677 LYPD2Q6UXB3 125 aa12.64□□□□□ -0.39
CDK11B-201ENST00000340677 RBMY1BA6NDE4 496 aaKnown RBP12.64□□□□□ -0.39
CDK11B-201ENST00000340677 RBMY1EA6NEQ0 496 aaKnown RBP12.64□□□□□ -0.39
CDK11B-201ENST00000340677 RBMY1DP0C7P1 496 aaKnown RBP12.64□□□□□ -0.39
CDK11B-201ENST00000340677 RBMY1A1P0DJD3 496 aaKnown RBP12.64□□□□□ -0.39
CDK11B-201ENST00000340677 RBMY1CP0DJD4 496 aa12.64□□□□□ -0.39
CDK11B-201ENST00000340677 RBMY1FQ15415 496 aaKnown RBP12.64□□□□□ -0.39
CDK11B-201ENST00000340677 E7EUB6 86 aa12.63□□□□□ -0.39
CDK11B-201ENST00000340677 FLNBO75369 2602 aaKnown RBP12.63□□□□□ -0.39
CDK11B-201ENST00000340677 IGKV3D-7A0A0C4DH55 119 aa12.63□□□□□ -0.39
CDK11B-201ENST00000340677 Q8N2B8 174 aa12.63□□□□□ -0.39
CDK11B-201ENST00000340677 CLEC2BQ92478 149 aa12.62□□□□□ -0.39
CDK11B-201ENST00000340677 NACAE9PAV3 2078 aa12.62□□□□□ -0.39
CDK11B-201ENST00000340677 DAD1P61803 113 aa12.62□□□□□ -0.39
CDK11B-201ENST00000340677 C8orf87E5RJ46 101 aa12.61□□□□□ -0.39
CDK11B-201ENST00000340677 LEAP2Q969E1 77 aa12.61□□□□□ -0.39
CDK11B-201ENST00000340677 TRBV19A0A075B6N1 114 aa12.61□□□□□ -0.39
CDK11B-201ENST00000340677 LST1O00453 97 aa12.61□□□□□ -0.39
CDK11B-201ENST00000340677 DYNAPQ8N1N2 210 aa12.61□□□□□ -0.39
CDK11B-201ENST00000340677 C14orf178Q8N769 122 aaPredicted RBP12.61□□□□□ -0.39
CDK11B-201ENST00000340677 TRAV12-1A0A0B4J245 112 aa12.6□□□□□ -0.39
CDK11B-201ENST00000340677 SOSTDC1Q6X4U4 206 aa12.6□□□□□ -0.39
CDK11B-201ENST00000340677 ADGRG4Q8IZF6 3080 aa12.6□□□□□ -0.39
CDK11B-201ENST00000340677 CYSRT1A8MQ03 144 aa12.6□□□□□ -0.39
CDK11B-201ENST00000340677 LYNX1G3V0Z9 82 aa12.6□□□□□ -0.39
CDK11B-201ENST00000340677 GHRHP01286 108 aa12.6□□□□□ -0.39
CDK11B-201ENST00000340677 LYNX1P0DP58 116 aa12.6□□□□□ -0.39
CDK11B-201ENST00000340677 FAM229BQ4G0N7 80 aa12.59□□□□□ -0.39
CDK11B-201ENST00000340677 C1orf229Q6ZS94 237 aaPredicted RBP12.59□□□□□ -0.39
CDK11B-201ENST00000340677 KALRNO60229 2985 aa12.59□□□□□ -0.39
CDK11B-201ENST00000340677 PLXNB1O43157 2135 aa12.59□□□□□ -0.39
CDK11B-201ENST00000340677 TRAV8-3A0A0A6YYJ7 113 aa12.59□□□□□ -0.39
CDK11B-201ENST00000340677 IGHV1-58A0A0C4DH39 117 aa12.59□□□□□ -0.39
CDK11B-201ENST00000340677 FXYD5Q96DB9 178 aa12.59□□□□□ -0.39
CDK11B-201ENST00000340677 IGKV1OR2-108A0A075B7D4 117 aa12.58□□□□□ -0.4
CDK11B-201ENST00000340677 GAS8-AS1O95177 125 aa12.58□□□□□ -0.4
CDK11B-201ENST00000340677 CFAP46Q8IYW2 2715 aa12.58□□□□□ -0.4
CDK11B-201ENST00000340677 ICOSQ9Y6W8 199 aa12.58□□□□□ -0.4
CDK11B-201ENST00000340677 Q6JHZ5 121 aa12.57□□□□□ -0.4
CDK11B-201ENST00000340677 KTN1-AS1Q86SY8 53 aa12.57□□□□□ -0.4
CDK11B-201ENST00000340677 Q86TA4 180 aa12.57□□□□□ -0.4
CDK11B-201ENST00000340677 DAND5Q8N907 189 aa12.57□□□□□ -0.4
CDK11B-201ENST00000340677 DOPEY1Q5JWR5 2465 aa12.57□□□□□ -0.4
CDK11B-201ENST00000340677 SH2D1AO60880 128 aa12.57□□□□□ -0.4
CDK11B-201ENST00000340677 MYO18BQ8IUG5 2567 aa12.56□□□□□ -0.4
CDK11B-201ENST00000340677 INAFM2P0DMQ5 153 aa12.56□□□□□ -0.4
CDK11B-201ENST00000340677 CCL3L1P16619 93 aa12.56□□□□□ -0.4
CDK11B-201ENST00000340677 LYZL1Q6UWQ5 148 aa12.56□□□□□ -0.4
CDK11B-201ENST00000340677 ZNF462Q96JM2 2506 aa12.56□□□□□ -0.4
CDK11B-201ENST00000340677 IGHV3OR16-10A0A075B7F0 116 aa12.56□□□□□ -0.4
CDK11B-201ENST00000340677 SAA2P0DJI9 122 aaPredicted RBP12.56□□□□□ -0.4
CDK11B-201ENST00000340677 LGALS3P17931 250 aaKnown RBP12.56□□□□□ -0.4
CDK11B-201ENST00000340677 ZNF833PQ6ZTB9 187 aa12.56□□□□□ -0.4
CDK11B-201ENST00000340677 PRR25Q96S07 402 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms